RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 FBLN2P98095 1184 aa23.07■■□□□ 1.28
SMARCD2-211ENST00000584483 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
SMARCD2-211ENST00000584483 RANGAP1P46060 587 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-211ENST00000584483 NUP160Q12769 1436 aa22.99■■□□□ 1.27
SMARCD2-211ENST00000584483 CLIP1P30622 1438 aa22.99■■□□□ 1.27
SMARCD2-211ENST00000584483 KIAA0586Q9BVV6 1533 aa22.95■■□□□ 1.26
SMARCD2-211ENST00000584483 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
SMARCD2-211ENST00000584483 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
SMARCD2-211ENST00000584483 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
SMARCD2-211ENST00000584483 UGGT2Q9NYU1 1516 aa22.85■■□□□ 1.25
SMARCD2-211ENST00000584483 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
SMARCD2-211ENST00000584483 P3H3Q8IVL6 736 aa22.82■■□□□ 1.24
SMARCD2-211ENST00000584483 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
SMARCD2-211ENST00000584483 EFCAB5A4FU69 1503 aa22.8■■□□□ 1.24
SMARCD2-211ENST00000584483 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
SMARCD2-211ENST00000584483 DISP1Q96F81 1524 aa22.78■■□□□ 1.24
SMARCD2-211ENST00000584483 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
SMARCD2-211ENST00000584483 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
SMARCD2-211ENST00000584483 KIAA0556O60303 1618 aa22.73■■□□□ 1.23
SMARCD2-211ENST00000584483 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
SMARCD2-211ENST00000584483 OSCARQ8IYS5 282 aa22.7■■□□□ 1.22
SMARCD2-211ENST00000584483 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-211ENST00000584483 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
SMARCD2-211ENST00000584483 CARMIL2Q6F5E8 1435 aa22.61■■□□□ 1.21
SMARCD2-211ENST00000584483 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-211ENST00000584483 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
SMARCD2-211ENST00000584483 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
SMARCD2-211ENST00000584483 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
SMARCD2-211ENST00000584483 LRRIQ1Q96JM4 1722 aa22.53■■□□□ 1.2
SMARCD2-211ENST00000584483 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
SMARCD2-211ENST00000584483 FYCO1Q9BQS8 1478 aa22.5■■□□□ 1.19
SMARCD2-211ENST00000584483 PTPRGP23470 1445 aa22.48■■□□□ 1.19
SMARCD2-211ENST00000584483 PLB1Q6P1J6 1458 aa22.47■■□□□ 1.19
SMARCD2-211ENST00000584483 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
SMARCD2-211ENST00000584483 ABCA8O94911 1581 aa22.46■■□□□ 1.19
SMARCD2-211ENST00000584483 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
SMARCD2-211ENST00000584483 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
SMARCD2-211ENST00000584483 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
SMARCD2-211ENST00000584483 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
SMARCD2-211ENST00000584483 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-211ENST00000584483 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
SMARCD2-211ENST00000584483 CFAP43Q8NDM7 1665 aa22.4■■□□□ 1.18
SMARCD2-211ENST00000584483 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
SMARCD2-211ENST00000584483 APLP2Q06481 763 aa22.37■■□□□ 1.17
SMARCD2-211ENST00000584483 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-211ENST00000584483 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
SMARCD2-211ENST00000584483 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
SMARCD2-211ENST00000584483 UACAQ9BZF9 1416 aa22.34■■□□□ 1.17
SMARCD2-211ENST00000584483 MAGI3Q5TCQ9 1506 aa22.31■■□□□ 1.16
SMARCD2-211ENST00000584483 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
SMARCD2-211ENST00000584483 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
SMARCD2-211ENST00000584483 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
SMARCD2-211ENST00000584483 CCDC18Q5T9S5 1454 aa22.31■■□□□ 1.16
SMARCD2-211ENST00000584483 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
SMARCD2-211ENST00000584483 ATP10BO94823 1461 aa22.29■■□□□ 1.16
SMARCD2-211ENST00000584483 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
SMARCD2-211ENST00000584483 UHRF1BP1LA0JNW5 1464 aa22.28■■□□□ 1.16
SMARCD2-211ENST00000584483 ADCY10Q96PN6 1610 aa22.26■■□□□ 1.15
SMARCD2-211ENST00000584483 KDM5BQ9UGL1 1544 aa22.19■■□□□ 1.14
SMARCD2-211ENST00000584483 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
SMARCD2-211ENST00000584483 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
SMARCD2-211ENST00000584483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
SMARCD2-211ENST00000584483 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
SMARCD2-211ENST00000584483 EHBP1L1Q8N3D4 1523 aa22.17■■□□□ 1.14
SMARCD2-211ENST00000584483 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
SMARCD2-211ENST00000584483 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
SMARCD2-211ENST00000584483 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
SMARCD2-211ENST00000584483 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
SMARCD2-211ENST00000584483 SUPT6HQ7KZ85 1726 aaKnown RBP22.11■■□□□ 1.13
SMARCD2-211ENST00000584483 NCOA2Q15596 1464 aa22.1■■□□□ 1.13
SMARCD2-211ENST00000584483 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
SMARCD2-211ENST00000584483 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
SMARCD2-211ENST00000584483 KIF14Q15058 1648 aa22.09■■□□□ 1.13
SMARCD2-211ENST00000584483 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
SMARCD2-211ENST00000584483 ABCC10Q5T3U5 1492 aa22.02■■□□□ 1.12
SMARCD2-211ENST00000584483 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
SMARCD2-211ENST00000584483 MYOM3Q5VTT5 1437 aa21.97■■□□□ 1.11
SMARCD2-211ENST00000584483 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
SMARCD2-211ENST00000584483 NPM1P06748 294 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMARCD2-211ENST00000584483 WDR7Q9Y4E6 1490 aa21.96■■□□□ 1.11
SMARCD2-211ENST00000584483 KCNH8Q96L42 1107 aa21.95■■□□□ 1.1
SMARCD2-211ENST00000584483 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
SMARCD2-211ENST00000584483 FGD6Q6ZV73 1430 aa21.95■■□□□ 1.1
SMARCD2-211ENST00000584483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMARCD2-211ENST00000584483 GPATCH8Q9UKJ3 1502 aaKnown RBP21.94■■□□□ 1.1
SMARCD2-211ENST00000584483 CDC42BPAQ5VT25 1732 aa21.94■■□□□ 1.1
SMARCD2-211ENST00000584483 TTC37Q6PGP7 1564 aa21.93■■□□□ 1.1
SMARCD2-211ENST00000584483 CCNB3Q8WWL7 1395 aa21.93■■□□□ 1.1
SMARCD2-211ENST00000584483 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
SMARCD2-211ENST00000584483 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
SMARCD2-211ENST00000584483 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
SMARCD2-211ENST00000584483 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
SMARCD2-211ENST00000584483 MIA2Q96PC5 1412 aa21.87■■□□□ 1.09
SMARCD2-211ENST00000584483 TCOF1Q13428 1488 aaKnown RBP21.86■■□□□ 1.09
SMARCD2-211ENST00000584483 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
SMARCD2-211ENST00000584483 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
SMARCD2-211ENST00000584483 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
SMARCD2-211ENST00000584483 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.09
SMARCD2-211ENST00000584483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.83■■□□□ 1.08
SMARCD2-211ENST00000584483 MYO5CQ9NQX4 1742 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms