RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
SMARCD2-211ENST00000584483 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
SMARCD2-211ENST00000584483 ABCC9O60706 1549 aa28.08■■■□□ 2.08
SMARCD2-211ENST00000584483 ZCCHC6Q5VYS8 1495 aaKnown RBP28.03■■■□□ 2.08
SMARCD2-211ENST00000584483 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
SMARCD2-211ENST00000584483 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
SMARCD2-211ENST00000584483 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
SMARCD2-211ENST00000584483 NACADO15069 1562 aa27.39■■□□□ 1.98
SMARCD2-211ENST00000584483 RB1CC1Q8TDY2 1594 aa27.24■■□□□ 1.95
SMARCD2-211ENST00000584483 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
SMARCD2-211ENST00000584483 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
SMARCD2-211ENST00000584483 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
SMARCD2-211ENST00000584483 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
SMARCD2-211ENST00000584483 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
SMARCD2-211ENST00000584483 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
SMARCD2-211ENST00000584483 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
SMARCD2-211ENST00000584483 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
SMARCD2-211ENST00000584483 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
SMARCD2-211ENST00000584483 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
SMARCD2-211ENST00000584483 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
SMARCD2-211ENST00000584483 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
SMARCD2-211ENST00000584483 WIZO95785 1651 aa25.65■■□□□ 1.7
SMARCD2-211ENST00000584483 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
SMARCD2-211ENST00000584483 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
SMARCD2-211ENST00000584483 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
SMARCD2-211ENST00000584483 SMARCA2P51531 1590 aa25.39■■□□□ 1.66
SMARCD2-211ENST00000584483 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
SMARCD2-211ENST00000584483 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
SMARCD2-211ENST00000584483 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
SMARCD2-211ENST00000584483 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
SMARCD2-211ENST00000584483 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
SMARCD2-211ENST00000584483 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
SMARCD2-211ENST00000584483 CFTRP13569 1480 aa24.64■■□□□ 1.54
SMARCD2-211ENST00000584483 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
SMARCD2-211ENST00000584483 NESP48681 1621 aa24.58■■□□□ 1.53
SMARCD2-211ENST00000584483 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
SMARCD2-211ENST00000584483 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
SMARCD2-211ENST00000584483 LAMC3Q9Y6N6 1575 aa24.49■■□□□ 1.51
SMARCD2-211ENST00000584483 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
SMARCD2-211ENST00000584483 FANCD2Q9BXW9 1451 aa24.34■■□□□ 1.49
SMARCD2-211ENST00000584483 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
SMARCD2-211ENST00000584483 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
SMARCD2-211ENST00000584483 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
SMARCD2-211ENST00000584483 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
SMARCD2-211ENST00000584483 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
SMARCD2-211ENST00000584483 CUX1P39880 1505 aa24.2■■□□□ 1.47
SMARCD2-211ENST00000584483 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
SMARCD2-211ENST00000584483 TOP2BQ02880 1626 aa24.16■■□□□ 1.46
SMARCD2-211ENST00000584483 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
SMARCD2-211ENST00000584483 URB2Q14146 1524 aaKnown RBP24.11■■□□□ 1.45
SMARCD2-211ENST00000584483 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
SMARCD2-211ENST00000584483 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
SMARCD2-211ENST00000584483 ERCC6Q03468 1493 aa24.03■■□□□ 1.44
SMARCD2-211ENST00000584483 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
SMARCD2-211ENST00000584483 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
SMARCD2-211ENST00000584483 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
SMARCD2-211ENST00000584483 WDR62O43379 1518 aa23.93■■□□□ 1.42
SMARCD2-211ENST00000584483 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
SMARCD2-211ENST00000584483 SOGA1O94964 1423 aa23.91■■□□□ 1.42
SMARCD2-211ENST00000584483 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
SMARCD2-211ENST00000584483 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
SMARCD2-211ENST00000584483 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
SMARCD2-211ENST00000584483 CUX2O14529 1486 aa23.81■■□□□ 1.4
SMARCD2-211ENST00000584483 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-211ENST00000584483 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
SMARCD2-211ENST00000584483 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
SMARCD2-211ENST00000584483 EEA1Q15075 1411 aa23.68■■□□□ 1.38
SMARCD2-211ENST00000584483 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
SMARCD2-211ENST00000584483 IFT140Q96RY7 1462 aa23.65■■□□□ 1.38
SMARCD2-211ENST00000584483 CSRNP3Q8WYN3 585 aa23.64■■□□□ 1.37
SMARCD2-211ENST00000584483 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
SMARCD2-211ENST00000584483 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
SMARCD2-211ENST00000584483 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
SMARCD2-211ENST00000584483 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
SMARCD2-211ENST00000584483 IGF1RP08069 1367 aa23.57■■□□□ 1.36
SMARCD2-211ENST00000584483 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.361e-6■■■□□ 19
SMARCD2-211ENST00000584483 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
SMARCD2-211ENST00000584483 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
SMARCD2-211ENST00000584483 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
SMARCD2-211ENST00000584483 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
SMARCD2-211ENST00000584483 PBRM1Q86U86 1689 aa23.47■■□□□ 1.35
SMARCD2-211ENST00000584483 KIF21BO75037 1637 aa23.46■■□□□ 1.35
SMARCD2-211ENST00000584483 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
SMARCD2-211ENST00000584483 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
SMARCD2-211ENST00000584483 GRIN2BQ13224 1484 aa23.4■■□□□ 1.34
SMARCD2-211ENST00000584483 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
SMARCD2-211ENST00000584483 CUL7Q14999 1698 aa23.37■■□□□ 1.33
SMARCD2-211ENST00000584483 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
SMARCD2-211ENST00000584483 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
SMARCD2-211ENST00000584483 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
SMARCD2-211ENST00000584483 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
SMARCD2-211ENST00000584483 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
SMARCD2-211ENST00000584483 TNIKQ9UKE5 1360 aa23.25■■□□□ 1.31
SMARCD2-211ENST00000584483 MAGI1Q96QZ7 1491 aaPredicted RBP23.24■■□□□ 1.31
SMARCD2-211ENST00000584483 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
SMARCD2-211ENST00000584483 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
SMARCD2-211ENST00000584483 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
SMARCD2-211ENST00000584483 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
SMARCD2-211ENST00000584483 CEP162Q5TB80 1403 aa23.08■■□□□ 1.29
SMARCD2-211ENST00000584483 CHD1O14646 1710 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms