RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
CSNK1D-223ENST00000584472 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
CSNK1D-223ENST00000584472 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
CSNK1D-223ENST00000584472 PRG4Q92954 1404 aaPredicted RBP26.75■■□□□ 1.87
CSNK1D-223ENST00000584472 TRHP20396 242 aaPredicted RBP26.75■■□□□ 1.87
CSNK1D-223ENST00000584472 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
CSNK1D-223ENST00000584472 EEA1Q15075 1411 aa26.69■■□□□ 1.86
CSNK1D-223ENST00000584472 PRXQ9BXM0 1461 aa26.64■■□□□ 1.86
CSNK1D-223ENST00000584472 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
CSNK1D-223ENST00000584472 IQGAP2Q13576 1575 aa26.54■■□□□ 1.84
CSNK1D-223ENST00000584472 CTTNBP2Q8WZ74 1663 aa26.48■■□□□ 1.83
CSNK1D-223ENST00000584472 CARMIL2Q6F5E8 1435 aa26.47■■□□□ 1.83
CSNK1D-223ENST00000584472 MAPKBP1O60336 1514 aa26.45■■□□□ 1.83
CSNK1D-223ENST00000584472 ADCY10Q96PN6 1610 aa26.43■■□□□ 1.82
CSNK1D-223ENST00000584472 UGGT2Q9NYU1 1516 aa26.41■■□□□ 1.82
CSNK1D-223ENST00000584472 KIF21BO75037 1637 aa26.41■■□□□ 1.82
CSNK1D-223ENST00000584472 FAM9AQ8IZU1 332 aaPredicted RBP26.41■■□□□ 1.82
CSNK1D-223ENST00000584472 TNIKQ9UKE5 1360 aa26.4■■□□□ 1.82
CSNK1D-223ENST00000584472 NPM1P06748 294 aaKnown RBP eCLIP26.39■■□□□ 1.82
CSNK1D-223ENST00000584472 PTPRGP23470 1445 aa26.39■■□□□ 1.81
CSNK1D-223ENST00000584472 KIF13AQ9H1H9 1805 aa26.36■■□□□ 1.81
CSNK1D-223ENST00000584472 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
CSNK1D-223ENST00000584472 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
CSNK1D-223ENST00000584472 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
CSNK1D-223ENST00000584472 KIAA0556O60303 1618 aa26.28■■□□□ 1.8
CSNK1D-223ENST00000584472 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
CSNK1D-223ENST00000584472 ABCC2Q92887 1545 aa26.27■■□□□ 1.8
CSNK1D-223ENST00000584472 DIP2BQ9P265 1576 aa26.27■■□□□ 1.8
CSNK1D-223ENST00000584472 UACAQ9BZF9 1416 aa26.22■■□□□ 1.79
CSNK1D-223ENST00000584472 FAM69CQ0P6D2 419 aa26.19■■□□□ 1.78
CSNK1D-223ENST00000584472 PLB1Q6P1J6 1458 aa26.16■■□□□ 1.78
CSNK1D-223ENST00000584472 KDM5BQ9UGL1 1544 aa26.15■■□□□ 1.78
CSNK1D-223ENST00000584472 SAMD9Q5K651 1589 aa26.15■■□□□ 1.78
CSNK1D-223ENST00000584472 GLI2P10070 1586 aa26.1■■□□□ 1.77
CSNK1D-223ENST00000584472 ASXL2Q76L83 1435 aa26.09■■□□□ 1.77
CSNK1D-223ENST00000584472 TTBK1Q5TCY1 1321 aaPredicted RBP26.08■■□□□ 1.77
CSNK1D-223ENST00000584472 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
CSNK1D-223ENST00000584472 EFCAB5A4FU69 1503 aa26.06■■□□□ 1.76
CSNK1D-223ENST00000584472 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
CSNK1D-223ENST00000584472 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
CSNK1D-223ENST00000584472 ABCA8O94911 1581 aa26■■□□□ 1.75
CSNK1D-223ENST00000584472 EPRSP07814 1512 aaKnown RBP25.97■■□□□ 1.75
CSNK1D-223ENST00000584472 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
CSNK1D-223ENST00000584472 RANGAP1P46060 587 aaPredicted RBP25.94■■□□□ 1.74
CSNK1D-223ENST00000584472 KDM6BO15054 1643 aa25.94■■□□□ 1.74
CSNK1D-223ENST00000584472 WDR7Q9Y4E6 1490 aa25.93■■□□□ 1.74
CSNK1D-223ENST00000584472 FHOD3Q2V2M9 1422 aa25.92■■□□□ 1.74
CSNK1D-223ENST00000584472 MAP3K4Q9Y6R4 1608 aa25.92■■□□□ 1.74
CSNK1D-223ENST00000584472 TSPOAP1O95153 1857 aa25.91■■□□□ 1.74
CSNK1D-223ENST00000584472 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
CSNK1D-223ENST00000584472 PPRC1Q5VV67 1664 aaKnown RBP25.9■■□□□ 1.74
CSNK1D-223ENST00000584472 ARHGAP35Q9NRY4 1499 aa25.87■■□□□ 1.73
CSNK1D-223ENST00000584472 TEX14Q8IWB6 1497 aa25.86■■□□□ 1.73
CSNK1D-223ENST00000584472 RAPGEF6Q8TEU7 1601 aa25.86■■□□□ 1.73
CSNK1D-223ENST00000584472 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
CSNK1D-223ENST00000584472 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
CSNK1D-223ENST00000584472 CFAP43Q8NDM7 1665 aa25.77■■□□□ 1.72
CSNK1D-223ENST00000584472 NUP153P49790 1475 aaKnown RBP25.76■■□□□ 1.71
CSNK1D-223ENST00000584472 MAGI3Q5TCQ9 1506 aa25.76■■□□□ 1.71
CSNK1D-223ENST00000584472 ATP10BO94823 1461 aa25.75■■□□□ 1.71
CSNK1D-223ENST00000584472 CLIP1P30622 1438 aa25.73■■□□□ 1.71
CSNK1D-223ENST00000584472 CD109Q6YHK3 1445 aa25.7■■□□□ 1.7
CSNK1D-223ENST00000584472 HECW1Q76N89 1606 aa25.66■■□□□ 1.7
CSNK1D-223ENST00000584472 COL17A1Q9UMD9 1497 aaPredicted RBP25.66■■□□□ 1.7
CSNK1D-223ENST00000584472 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
CSNK1D-223ENST00000584472 CEP162Q5TB80 1403 aa25.63■■□□□ 1.69
CSNK1D-223ENST00000584472 ABCA9Q8IUA7 1624 aa25.63■■□□□ 1.69
CSNK1D-223ENST00000584472 KCNH8Q96L42 1107 aa25.61■■□□□ 1.69
CSNK1D-223ENST00000584472 PHLDB1Q86UU1 1377 aa25.6■■□□□ 1.69
CSNK1D-223ENST00000584472 CASKIN1Q8WXD9 1431 aa25.59■■□□□ 1.69
CSNK1D-223ENST00000584472 PCF11O94913 1555 aaKnown RBP25.58■■□□□ 1.69
CSNK1D-223ENST00000584472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
CSNK1D-223ENST00000584472 HNRNPUL2Q1KMD3 747 aaKnown RBP25.57■■□□□ 1.68
CSNK1D-223ENST00000584472 CDK13Q14004 1512 aaKnown RBP25.56■■□□□ 1.68
CSNK1D-223ENST00000584472 ARAP3Q8WWN8 1544 aa25.56■■□□□ 1.68
CSNK1D-223ENST00000584472 FYCO1Q9BQS8 1478 aa25.55■■□□□ 1.68
CSNK1D-223ENST00000584472 KDM4FA0A1W2PPD8 638 aa25.51■■□□□ 1.67
CSNK1D-223ENST00000584472 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
CSNK1D-223ENST00000584472 LRRIQ1Q96JM4 1722 aa25.51■■□□□ 1.67
CSNK1D-223ENST00000584472 PLEKHD1A6NEE1 506 aa25.5■■□□□ 1.67
CSNK1D-223ENST00000584472 CCDC18Q5T9S5 1454 aa25.5■■□□□ 1.67
CSNK1D-223ENST00000584472 NEO1Q92859 1461 aa25.5■■□□□ 1.67
CSNK1D-223ENST00000584472 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
CSNK1D-223ENST00000584472 ADGRL1O94910 1474 aa25.4■■□□□ 1.66
CSNK1D-223ENST00000584472 TROQ12816 1431 aaPredicted RBP25.38■■□□□ 1.65
CSNK1D-223ENST00000584472 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
CSNK1D-223ENST00000584472 CFAP74Q9C0B2 1584 aa25.36■■□□□ 1.65
CSNK1D-223ENST00000584472 KIF14Q15058 1648 aa25.35■■□□□ 1.65
CSNK1D-223ENST00000584472 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
CSNK1D-223ENST00000584472 VPS8Q8N3P4 1428 aa25.34■■□□□ 1.65
CSNK1D-223ENST00000584472 FANCAO15360 1455 aa25.3■■□□□ 1.64
CSNK1D-223ENST00000584472 FRMPD1Q5SYB0 1578 aa25.28■■□□□ 1.64
CSNK1D-223ENST00000584472 AKNAQ7Z591 1439 aa25.26■■□□□ 1.63
CSNK1D-223ENST00000584472 PLCH2O75038 1416 aa25.25■■□□□ 1.63
CSNK1D-223ENST00000584472 DENND4BO75064 1496 aaPredicted RBP25.25■■□□□ 1.63
CSNK1D-223ENST00000584472 MYO5CQ9NQX4 1742 aa25.25■■□□□ 1.63
CSNK1D-223ENST00000584472 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
CSNK1D-223ENST00000584472 RAPGEF3O95398 923 aa25.22■■□□□ 1.63
CSNK1D-223ENST00000584472 ZMYM4Q5VZL5 1548 aa25.22■■□□□ 1.63
CSNK1D-223ENST00000584472 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms