RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
CDK5RAP3-230ENST00000584042 IQGAP2Q13576 1575 aa27.05■■□□□ 1.92
CDK5RAP3-230ENST00000584042 FBLN2P98095 1184 aa27.03■■□□□ 1.92
CDK5RAP3-230ENST00000584042 KIAA0586Q9BVV6 1533 aa27.03■■□□□ 1.92
CDK5RAP3-230ENST00000584042 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
CDK5RAP3-230ENST00000584042 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
CDK5RAP3-230ENST00000584042 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
CDK5RAP3-230ENST00000584042 UGGT2Q9NYU1 1516 aa26.93■■□□□ 1.9
CDK5RAP3-230ENST00000584042 CLIP1P30622 1438 aa26.91■■□□□ 1.9
CDK5RAP3-230ENST00000584042 SAMD9Q5K651 1589 aa26.91■■□□□ 1.9
CDK5RAP3-230ENST00000584042 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
CDK5RAP3-230ENST00000584042 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
CDK5RAP3-230ENST00000584042 KIAA0556O60303 1618 aa26.8■■□□□ 1.88
CDK5RAP3-230ENST00000584042 ARAP1Q96P48 1450 aa26.76■■□□□ 1.87
CDK5RAP3-230ENST00000584042 DISP1Q96F81 1524 aa26.75■■□□□ 1.87
CDK5RAP3-230ENST00000584042 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
CDK5RAP3-230ENST00000584042 JPH4Q96JJ6 628 aa26.7■■□□□ 1.86
CDK5RAP3-230ENST00000584042 RANGAP1P46060 587 aaPredicted RBP26.69■■□□□ 1.86
CDK5RAP3-230ENST00000584042 CARMIL2Q6F5E8 1435 aa26.69■■□□□ 1.86
CDK5RAP3-230ENST00000584042 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
CDK5RAP3-230ENST00000584042 PRG4Q92954 1404 aaPredicted RBP26.66■■□□□ 1.86
CDK5RAP3-230ENST00000584042 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
CDK5RAP3-230ENST00000584042 FMN1Q68DA7 1419 aa26.6■■□□□ 1.85
CDK5RAP3-230ENST00000584042 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
CDK5RAP3-230ENST00000584042 PCF11O94913 1555 aaKnown RBP26.54■■□□□ 1.84
CDK5RAP3-230ENST00000584042 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
CDK5RAP3-230ENST00000584042 FYCO1Q9BQS8 1478 aa26.5■■□□□ 1.83
CDK5RAP3-230ENST00000584042 CASKIN1Q8WXD9 1431 aa26.48■■□□□ 1.83
CDK5RAP3-230ENST00000584042 HECW1Q76N89 1606 aa26.46■■□□□ 1.83
CDK5RAP3-230ENST00000584042 RAPGEF6Q8TEU7 1601 aa26.46■■□□□ 1.83
CDK5RAP3-230ENST00000584042 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
CDK5RAP3-230ENST00000584042 ABCA8O94911 1581 aa26.44■■□□□ 1.82
CDK5RAP3-230ENST00000584042 PTPRGP23470 1445 aa26.42■■□□□ 1.82
CDK5RAP3-230ENST00000584042 CFAP43Q8NDM7 1665 aa26.39■■□□□ 1.82
CDK5RAP3-230ENST00000584042 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
CDK5RAP3-230ENST00000584042 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
CDK5RAP3-230ENST00000584042 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
CDK5RAP3-230ENST00000584042 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
CDK5RAP3-230ENST00000584042 LRRIQ1Q96JM4 1722 aa26.36■■□□□ 1.81
CDK5RAP3-230ENST00000584042 MAP3K1Q13233 1512 aa26.34■■□□□ 1.81
CDK5RAP3-230ENST00000584042 CCDC18Q5T9S5 1454 aa26.34■■□□□ 1.81
CDK5RAP3-230ENST00000584042 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
CDK5RAP3-230ENST00000584042 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
CDK5RAP3-230ENST00000584042 TIAM1Q13009 1591 aa26.32■■□□□ 1.8
CDK5RAP3-230ENST00000584042 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
CDK5RAP3-230ENST00000584042 UHRF1BP1LA0JNW5 1464 aa26.31■■□□□ 1.8
CDK5RAP3-230ENST00000584042 EPRSP07814 1512 aaKnown RBP26.28■■□□□ 1.8
CDK5RAP3-230ENST00000584042 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
CDK5RAP3-230ENST00000584042 ADCY10Q96PN6 1610 aa26.25■■□□□ 1.79
CDK5RAP3-230ENST00000584042 CDK13Q14004 1512 aaKnown RBP26.21■■□□□ 1.79
CDK5RAP3-230ENST00000584042 APLP2Q06481 763 aa26.19■■□□□ 1.78
CDK5RAP3-230ENST00000584042 KDM5BQ9UGL1 1544 aa26.17■■□□□ 1.78
CDK5RAP3-230ENST00000584042 EHBP1L1Q8N3D4 1523 aa26.15■■□□□ 1.78
CDK5RAP3-230ENST00000584042 ZCCHC11Q5TAX3 1644 aaKnown RBP26.15■■□□□ 1.78
CDK5RAP3-230ENST00000584042 ATP1B4Q9UN42 357 aaPredicted RBP26.15■■□□□ 1.78
CDK5RAP3-230ENST00000584042 ATP10BO94823 1461 aa26.14■■□□□ 1.78
CDK5RAP3-230ENST00000584042 LRRC9Q6ZRR7 1453 aa26.14■■□□□ 1.78
CDK5RAP3-230ENST00000584042 MAGI3Q5TCQ9 1506 aa26.09■■□□□ 1.77
CDK5RAP3-230ENST00000584042 MTUS2Q5JR59 1369 aa26.04■■□□□ 1.76
CDK5RAP3-230ENST00000584042 SUPT6HQ7KZ85 1726 aaKnown RBP26.03■■□□□ 1.76
CDK5RAP3-230ENST00000584042 ARID3CA6NKF2 412 aa26.02■■□□□ 1.76
CDK5RAP3-230ENST00000584042 TROQ12816 1431 aaPredicted RBP26.02■■□□□ 1.76
CDK5RAP3-230ENST00000584042 KANK4Q5T7N3 995 aaPredicted RBP26.01■■□□□ 1.75
CDK5RAP3-230ENST00000584042 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
CDK5RAP3-230ENST00000584042 KIF14Q15058 1648 aa25.98■■□□□ 1.75
CDK5RAP3-230ENST00000584042 CYB5RLQ6IPT4 315 aa25.97■■□□□ 1.75
CDK5RAP3-230ENST00000584042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
CDK5RAP3-230ENST00000584042 HNRNPUL2Q1KMD3 747 aaKnown RBP25.96■■□□□ 1.75
CDK5RAP3-230ENST00000584042 MAPKBP1O60336 1514 aa25.95■■□□□ 1.74
CDK5RAP3-230ENST00000584042 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
CDK5RAP3-230ENST00000584042 NCOA2Q15596 1464 aa25.92■■□□□ 1.74
CDK5RAP3-230ENST00000584042 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
CDK5RAP3-230ENST00000584042 PLEKHD1A6NEE1 506 aa25.89■■□□□ 1.74
CDK5RAP3-230ENST00000584042 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.74
CDK5RAP3-230ENST00000584042 NPM1P06748 294 aaKnown RBP eCLIP25.88■■□□□ 1.73
CDK5RAP3-230ENST00000584042 ASXL2Q76L83 1435 aa25.88■■□□□ 1.73
CDK5RAP3-230ENST00000584042 ITSN2Q9NZM3 1697 aa25.85■■□□□ 1.73
CDK5RAP3-230ENST00000584042 ABCC10Q5T3U5 1492 aa25.85■■□□□ 1.73
CDK5RAP3-230ENST00000584042 TTC37Q6PGP7 1564 aa25.81■■□□□ 1.72
CDK5RAP3-230ENST00000584042 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
CDK5RAP3-230ENST00000584042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.8■■□□□ 1.72
CDK5RAP3-230ENST00000584042 MYOM3Q5VTT5 1437 aa25.79■■□□□ 1.72
CDK5RAP3-230ENST00000584042 ABCA9Q8IUA7 1624 aa25.78■■□□□ 1.72
CDK5RAP3-230ENST00000584042 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
CDK5RAP3-230ENST00000584042 PREX2Q70Z35 1606 aa25.77■■□□□ 1.72
CDK5RAP3-230ENST00000584042 MYO5CQ9NQX4 1742 aa25.77■■□□□ 1.72
CDK5RAP3-230ENST00000584042 RRBP1Q9P2E9 1410 aaKnown RBP25.76■■□□□ 1.71
CDK5RAP3-230ENST00000584042 FGD6Q6ZV73 1430 aa25.72■■□□□ 1.71
CDK5RAP3-230ENST00000584042 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
CDK5RAP3-230ENST00000584042 GPATCH8Q9UKJ3 1502 aaKnown RBP25.72■■□□□ 1.71
CDK5RAP3-230ENST00000584042 MIA2Q96PC5 1412 aa25.71■■□□□ 1.71
CDK5RAP3-230ENST00000584042 GLI2P10070 1586 aa25.71■■□□□ 1.71
CDK5RAP3-230ENST00000584042 DIP2BQ9P265 1576 aa25.71■■□□□ 1.71
CDK5RAP3-230ENST00000584042 ARAP3Q8WWN8 1544 aa25.71■■□□□ 1.71
CDK5RAP3-230ENST00000584042 PTPN23Q9H3S7 1636 aa25.68■■□□□ 1.7
CDK5RAP3-230ENST00000584042 CDC42BPBQ9Y5S2 1711 aa25.67■■□□□ 1.7
CDK5RAP3-230ENST00000584042 TCOF1Q13428 1488 aaKnown RBP25.66■■□□□ 1.7
CDK5RAP3-230ENST00000584042 MAP3K4Q9Y6R4 1608 aa25.64■■□□□ 1.7
CDK5RAP3-230ENST00000584042 KCNH8Q96L42 1107 aa25.63■■□□□ 1.69
CDK5RAP3-230ENST00000584042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms