RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
CRLF3-205ENST00000583805 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
CRLF3-205ENST00000583805 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
CRLF3-205ENST00000583805 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
CRLF3-205ENST00000583805 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
CRLF3-205ENST00000583805 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
CRLF3-205ENST00000583805 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
CRLF3-205ENST00000583805 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
CRLF3-205ENST00000583805 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
CRLF3-205ENST00000583805 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
CRLF3-205ENST00000583805 NUP160Q12769 1436 aa15.37■□□□□ 0.05
CRLF3-205ENST00000583805 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
CRLF3-205ENST00000583805 CUL7Q14999 1698 aa15.31■□□□□ 0.04
CRLF3-205ENST00000583805 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
CRLF3-205ENST00000583805 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
CRLF3-205ENST00000583805 ERCC6L2Q5T890 1561 aa15.28■□□□□ 0.04
CRLF3-205ENST00000583805 KIF13AQ9H1H9 1805 aa15.21■□□□□ 0.03
CRLF3-205ENST00000583805 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
CRLF3-205ENST00000583805 PRG4Q92954 1404 aaPredicted RBP15.16■□□□□ 0.02
CRLF3-205ENST00000583805 KIAA0586Q9BVV6 1533 aa15.12■□□□□ 0.01
CRLF3-205ENST00000583805 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
CRLF3-205ENST00000583805 IGF1RP08069 1367 aa15.09■□□□□ 0.01
CRLF3-205ENST00000583805 MAPKBP1O60336 1514 aa15.08■□□□□ 0.01
CRLF3-205ENST00000583805 ADCY10Q96PN6 1610 aa15.08■□□□□ 0
CRLF3-205ENST00000583805 ZBTB22O15209 634 aa15.07■□□□□ 0
CRLF3-205ENST00000583805 IQGAP2Q13576 1575 aa15.06■□□□□ 0
CRLF3-205ENST00000583805 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
CRLF3-205ENST00000583805 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
CRLF3-205ENST00000583805 DIP2BQ9P265 1576 aa15.02■□□□□ -0
CRLF3-205ENST00000583805 MSH5O43196 834 aa15□□□□□ -0.01
CRLF3-205ENST00000583805 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
CRLF3-205ENST00000583805 ABCC10Q5T3U5 1492 aa14.99□□□□□ -0.01
CRLF3-205ENST00000583805 CARMIL2Q6F5E8 1435 aa14.99□□□□□ -0.01
CRLF3-205ENST00000583805 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
CRLF3-205ENST00000583805 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
CRLF3-205ENST00000583805 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
CRLF3-205ENST00000583805 UGGT2Q9NYU1 1516 aa14.93□□□□□ -0.02
CRLF3-205ENST00000583805 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
CRLF3-205ENST00000583805 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
CRLF3-205ENST00000583805 PTPRGP23470 1445 aa14.92□□□□□ -0.02
CRLF3-205ENST00000583805 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
CRLF3-205ENST00000583805 ABCC2Q92887 1545 aa14.91□□□□□ -0.02
CRLF3-205ENST00000583805 DISP1Q96F81 1524 aa14.9□□□□□ -0.02
CRLF3-205ENST00000583805 KDM6BO15054 1643 aa14.89□□□□□ -0.03
CRLF3-205ENST00000583805 GLI2P10070 1586 aa14.87□□□□□ -0.03
CRLF3-205ENST00000583805 FAM69CQ0P6D2 419 aa14.87□□□□□ -0.03
CRLF3-205ENST00000583805 ZCCHC11Q5TAX3 1644 aaKnown RBP14.86□□□□□ -0.03
CRLF3-205ENST00000583805 PPRC1Q5VV67 1664 aaKnown RBP14.85□□□□□ -0.03
CRLF3-205ENST00000583805 PLB1Q6P1J6 1458 aa14.85□□□□□ -0.03
CRLF3-205ENST00000583805 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
CRLF3-205ENST00000583805 MAP3K4Q9Y6R4 1608 aa14.83□□□□□ -0.04
CRLF3-205ENST00000583805 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
CRLF3-205ENST00000583805 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
CRLF3-205ENST00000583805 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
CRLF3-205ENST00000583805 ASXL2Q76L83 1435 aa14.81□□□□□ -0.04
CRLF3-205ENST00000583805 PRXQ9BXM0 1461 aa14.79□□□□□ -0.04
CRLF3-205ENST00000583805 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
CRLF3-205ENST00000583805 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
CRLF3-205ENST00000583805 MAPK8IP2Q13387 824 aaPredicted RBP14.75□□□□□ -0.05
CRLF3-205ENST00000583805 ABCA8O94911 1581 aa14.75□□□□□ -0.05
CRLF3-205ENST00000583805 EPRSP07814 1512 aaKnown RBP14.74□□□□□ -0.05
CRLF3-205ENST00000583805 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
CRLF3-205ENST00000583805 WDR7Q9Y4E6 1490 aa14.72□□□□□ -0.05
CRLF3-205ENST00000583805 SAMD9Q5K651 1589 aa14.71□□□□□ -0.05
CRLF3-205ENST00000583805 EEA1Q15075 1411 aa14.7□□□□□ -0.06
CRLF3-205ENST00000583805 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
CRLF3-205ENST00000583805 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
CRLF3-205ENST00000583805 KIF21BO75037 1637 aa14.63□□□□□ -0.07
CRLF3-205ENST00000583805 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
CRLF3-205ENST00000583805 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
CRLF3-205ENST00000583805 ABCA9Q8IUA7 1624 aa14.6□□□□□ -0.07
CRLF3-205ENST00000583805 EFCAB5A4FU69 1503 aa14.58□□□□□ -0.08
CRLF3-205ENST00000583805 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
CRLF3-205ENST00000583805 CD109Q6YHK3 1445 aa14.57□□□□□ -0.08
CRLF3-205ENST00000583805 COL17A1Q9UMD9 1497 aaPredicted RBP14.56□□□□□ -0.08
CRLF3-205ENST00000583805 ATP10BO94823 1461 aa14.54□□□□□ -0.08
CRLF3-205ENST00000583805 ADGRL1O94910 1474 aa14.54□□□□□ -0.08
CRLF3-205ENST00000583805 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.09
CRLF3-205ENST00000583805 CFAP74Q9C0B2 1584 aa14.51□□□□□ -0.09
CRLF3-205ENST00000583805 ARAP3Q8WWN8 1544 aa14.51□□□□□ -0.09
CRLF3-205ENST00000583805 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
CRLF3-205ENST00000583805 PHLDB1Q86UU1 1377 aa14.49□□□□□ -0.09
CRLF3-205ENST00000583805 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
CRLF3-205ENST00000583805 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
CRLF3-205ENST00000583805 NEO1Q92859 1461 aa14.47□□□□□ -0.09
CRLF3-205ENST00000583805 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
CRLF3-205ENST00000583805 FHOD3Q2V2M9 1422 aa14.47□□□□□ -0.09
CRLF3-205ENST00000583805 RTN4Q9NQC3 1192 aaKnown RBP14.46□□□□□ -0.09
CRLF3-205ENST00000583805 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
CRLF3-205ENST00000583805 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
CRLF3-205ENST00000583805 HECW1Q76N89 1606 aa14.44□□□□□ -0.1
CRLF3-205ENST00000583805 RICTORQ6R327 1708 aa14.44□□□□□ -0.1
CRLF3-205ENST00000583805 FRMPD1Q5SYB0 1578 aa14.42□□□□□ -0.1
CRLF3-205ENST00000583805 MYO5CQ9NQX4 1742 aa14.41□□□□□ -0.1
CRLF3-205ENST00000583805 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
CRLF3-205ENST00000583805 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
CRLF3-205ENST00000583805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
CRLF3-205ENST00000583805 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
CRLF3-205ENST00000583805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
CRLF3-205ENST00000583805 FMN1Q68DA7 1419 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms