RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 FHAD1B1AJZ9 1412 aa13.96□□□□□ -0.18
KPNB1-213ENST00000583013 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
KPNB1-213ENST00000583013 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
KPNB1-213ENST00000583013 KIF27Q86VH2 1401 aa13.93□□□□□ -0.18
KPNB1-213ENST00000583013 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
KPNB1-213ENST00000583013 CUL7Q14999 1698 aa13.91□□□□□ -0.18
KPNB1-213ENST00000583013 NUP160Q12769 1436 aa13.9□□□□□ -0.18
KPNB1-213ENST00000583013 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
KPNB1-213ENST00000583013 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
KPNB1-213ENST00000583013 IGF1RP08069 1367 aa13.86□□□□□ -0.19
KPNB1-213ENST00000583013 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
KPNB1-213ENST00000583013 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
KPNB1-213ENST00000583013 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
KPNB1-213ENST00000583013 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
KPNB1-213ENST00000583013 KCNA4P22459 653 aa13.79□□□□□ -0.2
KPNB1-213ENST00000583013 CARMIL1Q5VZK9 1371 aa13.77□□□□□ -0.21
KPNB1-213ENST00000583013 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
KPNB1-213ENST00000583013 CYB5RLQ6IPT4 315 aa13.74□□□□□ -0.21
KPNB1-213ENST00000583013 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
KPNB1-213ENST00000583013 RAPGEF2Q9Y4G8 1499 aa13.72□□□□□ -0.21
KPNB1-213ENST00000583013 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
KPNB1-213ENST00000583013 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
KPNB1-213ENST00000583013 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
KPNB1-213ENST00000583013 IQGAP2Q13576 1575 aa13.68□□□□□ -0.22
KPNB1-213ENST00000583013 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
KPNB1-213ENST00000583013 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
KPNB1-213ENST00000583013 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
KPNB1-213ENST00000583013 EEA1Q15075 1411 aa13.65□□□□□ -0.22
KPNB1-213ENST00000583013 CTTNBP2Q8WZ74 1663 aa13.65□□□□□ -0.22
KPNB1-213ENST00000583013 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
KPNB1-213ENST00000583013 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.24
KPNB1-213ENST00000583013 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
KPNB1-213ENST00000583013 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
KPNB1-213ENST00000583013 KIAA0556O60303 1618 aa13.56□□□□□ -0.24
KPNB1-213ENST00000583013 KIF21BO75037 1637 aa13.54□□□□□ -0.24
KPNB1-213ENST00000583013 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
KPNB1-213ENST00000583013 TNIKQ9UKE5 1360 aa13.54□□□□□ -0.24
KPNB1-213ENST00000583013 PTPRGP23470 1445 aa13.51□□□□□ -0.25
KPNB1-213ENST00000583013 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
KPNB1-213ENST00000583013 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
KPNB1-213ENST00000583013 UHRF1BP1LA0JNW5 1464 aa13.48□□□□□ -0.25
KPNB1-213ENST00000583013 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
KPNB1-213ENST00000583013 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
KPNB1-213ENST00000583013 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
KPNB1-213ENST00000583013 ABCC2Q92887 1545 aa13.45□□□□□ -0.26
KPNB1-213ENST00000583013 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
KPNB1-213ENST00000583013 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
KPNB1-213ENST00000583013 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
KPNB1-213ENST00000583013 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
KPNB1-213ENST00000583013 ABCA8O94911 1581 aa13.41□□□□□ -0.26
KPNB1-213ENST00000583013 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
KPNB1-213ENST00000583013 KDM5BQ9UGL1 1544 aa13.4□□□□□ -0.26
KPNB1-213ENST00000583013 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.26
KPNB1-213ENST00000583013 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
KPNB1-213ENST00000583013 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
KPNB1-213ENST00000583013 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
KPNB1-213ENST00000583013 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
KPNB1-213ENST00000583013 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
KPNB1-213ENST00000583013 GLI2P10070 1586 aa13.32□□□□□ -0.28
KPNB1-213ENST00000583013 RAPGEF6Q8TEU7 1601 aa13.32□□□□□ -0.28
KPNB1-213ENST00000583013 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
KPNB1-213ENST00000583013 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
KPNB1-213ENST00000583013 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
KPNB1-213ENST00000583013 FAM69CQ0P6D2 419 aa13.29□□□□□ -0.28
KPNB1-213ENST00000583013 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
KPNB1-213ENST00000583013 EPRSP07814 1512 aaKnown RBP13.28□□□□□ -0.28
KPNB1-213ENST00000583013 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
KPNB1-213ENST00000583013 MAP3K4Q9Y6R4 1608 aa13.27□□□□□ -0.29
KPNB1-213ENST00000583013 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
KPNB1-213ENST00000583013 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
KPNB1-213ENST00000583013 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
KPNB1-213ENST00000583013 ATP10BO94823 1461 aa13.25□□□□□ -0.29
KPNB1-213ENST00000583013 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
KPNB1-213ENST00000583013 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
KPNB1-213ENST00000583013 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
KPNB1-213ENST00000583013 CFAP43Q8NDM7 1665 aa13.22□□□□□ -0.29
KPNB1-213ENST00000583013 HECW1Q76N89 1606 aa13.2□□□□□ -0.3
KPNB1-213ENST00000583013 KDM6BO15054 1643 aa13.18□□□□□ -0.3
KPNB1-213ENST00000583013 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
KPNB1-213ENST00000583013 TEX14Q8IWB6 1497 aa13.17□□□□□ -0.3
KPNB1-213ENST00000583013 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
KPNB1-213ENST00000583013 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
KPNB1-213ENST00000583013 CLIP1P30622 1438 aa13.14□□□□□ -0.31
KPNB1-213ENST00000583013 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
KPNB1-213ENST00000583013 CDK13Q14004 1512 aaKnown RBP13.14□□□□□ -0.31
KPNB1-213ENST00000583013 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
KPNB1-213ENST00000583013 PCF11O94913 1555 aaKnown RBP13.13□□□□□ -0.31
KPNB1-213ENST00000583013 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
KPNB1-213ENST00000583013 CASKIN1Q8WXD9 1431 aa13.12□□□□□ -0.31
KPNB1-213ENST00000583013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
KPNB1-213ENST00000583013 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
KPNB1-213ENST00000583013 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
KPNB1-213ENST00000583013 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
KPNB1-213ENST00000583013 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
KPNB1-213ENST00000583013 PLEKHD1A6NEE1 506 aa13.09□□□□□ -0.31
KPNB1-213ENST00000583013 CEP162Q5TB80 1403 aa13.08□□□□□ -0.32
KPNB1-213ENST00000583013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.32
KPNB1-213ENST00000583013 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
KPNB1-213ENST00000583013 COL17A1Q9UMD9 1497 aaPredicted RBP13.07□□□□□ -0.32
KPNB1-213ENST00000583013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms