RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
KPNB1-213ENST00000583013 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
KPNB1-213ENST00000583013 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
KPNB1-213ENST00000583013 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
KPNB1-213ENST00000583013 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
KPNB1-213ENST00000583013 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
KPNB1-213ENST00000583013 ABCC9O60706 1549 aa17.3■□□□□ 0.36
KPNB1-213ENST00000583013 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
KPNB1-213ENST00000583013 NACADO15069 1562 aa16.65■□□□□ 0.26
KPNB1-213ENST00000583013 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
KPNB1-213ENST00000583013 ZCCHC6Q5VYS8 1495 aaKnown RBP16.55■□□□□ 0.24
KPNB1-213ENST00000583013 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
KPNB1-213ENST00000583013 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
KPNB1-213ENST00000583013 FOXD1Q16676 465 aa16.38■□□□□ 0.21
KPNB1-213ENST00000583013 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
KPNB1-213ENST00000583013 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
KPNB1-213ENST00000583013 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
KPNB1-213ENST00000583013 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
KPNB1-213ENST00000583013 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
KPNB1-213ENST00000583013 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
KPNB1-213ENST00000583013 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
KPNB1-213ENST00000583013 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
KPNB1-213ENST00000583013 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
KPNB1-213ENST00000583013 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
KPNB1-213ENST00000583013 ADRA2BP18089 450 aa15.63■□□□□ 0.09
KPNB1-213ENST00000583013 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
KPNB1-213ENST00000583013 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
KPNB1-213ENST00000583013 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
KPNB1-213ENST00000583013 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
KPNB1-213ENST00000583013 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
KPNB1-213ENST00000583013 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
KPNB1-213ENST00000583013 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
KPNB1-213ENST00000583013 PEG3Q9GZU2 1588 aa15.32■□□□□ 0.04
KPNB1-213ENST00000583013 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
KPNB1-213ENST00000583013 MROH2BQ7Z745 1585 aa15.29■□□□□ 0.04
KPNB1-213ENST00000583013 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
KPNB1-213ENST00000583013 MSH5O43196 834 aa15.15■□□□□ 0.02
KPNB1-213ENST00000583013 WIZO95785 1651 aa15.12■□□□□ 0.01
KPNB1-213ENST00000583013 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
KPNB1-213ENST00000583013 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
KPNB1-213ENST00000583013 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
KPNB1-213ENST00000583013 NESP48681 1621 aa14.95□□□□□ -0.02
KPNB1-213ENST00000583013 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
KPNB1-213ENST00000583013 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
KPNB1-213ENST00000583013 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
KPNB1-213ENST00000583013 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
KPNB1-213ENST00000583013 CUX2O14529 1486 aa14.82□□□□□ -0.04
KPNB1-213ENST00000583013 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
KPNB1-213ENST00000583013 CFTRP13569 1480 aa14.8□□□□□ -0.04
KPNB1-213ENST00000583013 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
KPNB1-213ENST00000583013 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
KPNB1-213ENST00000583013 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
KPNB1-213ENST00000583013 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
KPNB1-213ENST00000583013 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
KPNB1-213ENST00000583013 WDR62O43379 1518 aa14.68□□□□□ -0.06
KPNB1-213ENST00000583013 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
KPNB1-213ENST00000583013 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
KPNB1-213ENST00000583013 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
KPNB1-213ENST00000583013 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
KPNB1-213ENST00000583013 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
KPNB1-213ENST00000583013 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
KPNB1-213ENST00000583013 TARBP1Q13395 1621 aaKnown RBP14.36□□□□□ -0.11
KPNB1-213ENST00000583013 CUX1P39880 1505 aa14.36□□□□□ -0.11
KPNB1-213ENST00000583013 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
KPNB1-213ENST00000583013 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
KPNB1-213ENST00000583013 ZNF608Q9ULD9 1512 aaPredicted RBP14.32□□□□□ -0.12
KPNB1-213ENST00000583013 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
KPNB1-213ENST00000583013 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
KPNB1-213ENST00000583013 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
KPNB1-213ENST00000583013 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
KPNB1-213ENST00000583013 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
KPNB1-213ENST00000583013 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
KPNB1-213ENST00000583013 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
KPNB1-213ENST00000583013 SOGA1O94964 1423 aa14.25□□□□□ -0.13
KPNB1-213ENST00000583013 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
KPNB1-213ENST00000583013 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
KPNB1-213ENST00000583013 WRNQ14191 1432 aaPredicted RBP eCLIP14.23□□□□□ -0.13
KPNB1-213ENST00000583013 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
KPNB1-213ENST00000583013 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.135e-9■■■□□ 15.5
KPNB1-213ENST00000583013 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
KPNB1-213ENST00000583013 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
KPNB1-213ENST00000583013 TDRD9Q8NDG6 1382 aaKnown RBP14.16□□□□□ -0.14
KPNB1-213ENST00000583013 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
KPNB1-213ENST00000583013 CHD1O14646 1710 aa14.14□□□□□ -0.15
KPNB1-213ENST00000583013 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
KPNB1-213ENST00000583013 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
KPNB1-213ENST00000583013 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
KPNB1-213ENST00000583013 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
KPNB1-213ENST00000583013 SNAPC4Q5SXM2 1469 aa14.11□□□□□ -0.15
KPNB1-213ENST00000583013 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
KPNB1-213ENST00000583013 SYNJ2O15056 1496 aa14.05□□□□□ -0.16
KPNB1-213ENST00000583013 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
KPNB1-213ENST00000583013 ADAMTS12P58397 1594 aa14.02□□□□□ -0.16
KPNB1-213ENST00000583013 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
KPNB1-213ENST00000583013 FBLN2P98095 1184 aa13.99□□□□□ -0.17
KPNB1-213ENST00000583013 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
KPNB1-213ENST00000583013 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
KPNB1-213ENST00000583013 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
KPNB1-213ENST00000583013 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
KPNB1-213ENST00000583013 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms