RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 JPH4Q96JJ6 628 aa34.68■■■■□ 3.14
PPP4R1-221ENST00000582240 RAPGEF2Q9Y4G8 1499 aa34.66■■■■□ 3.14
PPP4R1-221ENST00000582240 ERCC6L2Q5T890 1561 aa34.66■■■■□ 3.14
PPP4R1-221ENST00000582240 CSRNP3Q8WYN3 585 aa34.63■■■■□ 3.13
PPP4R1-221ENST00000582240 KIAA0586Q9BVV6 1533 aa34.6■■■■□ 3.13
PPP4R1-221ENST00000582240 SHROOM2Q13796 1616 aa34.58■■■■□ 3.13
PPP4R1-221ENST00000582240 PRG4Q92954 1404 aaPredicted RBP34.57■■■■□ 3.13
PPP4R1-221ENST00000582240 PRXQ9BXM0 1461 aa34.54■■■■□ 3.12
PPP4R1-221ENST00000582240 EEA1Q15075 1411 aa34.49■■■■□ 3.11
PPP4R1-221ENST00000582240 IQGAP2Q13576 1575 aa34.38■■■■□ 3.09
PPP4R1-221ENST00000582240 EHMT2Q96KQ7 1210 aa34.37■■■■□ 3.09
PPP4R1-221ENST00000582240 TTBK1Q5TCY1 1321 aaPredicted RBP34.34■■■■□ 3.09
PPP4R1-221ENST00000582240 CARMIL2Q6F5E8 1435 aa34.22■■■■□ 3.07
PPP4R1-221ENST00000582240 CTTNBP2Q8WZ74 1663 aa34.22■■■■□ 3.07
PPP4R1-221ENST00000582240 DISP1Q96F81 1524 aa34.2■■■■□ 3.07
PPP4R1-221ENST00000582240 UGGT2Q9NYU1 1516 aa34.2■■■■□ 3.07
PPP4R1-221ENST00000582240 PTPRGP23470 1445 aa34.16■■■■□ 3.06
PPP4R1-221ENST00000582240 TNIKQ9UKE5 1360 aa34.15■■■■□ 3.06
PPP4R1-221ENST00000582240 RANGAP1P46060 587 aaPredicted RBP34.15■■■■□ 3.06
PPP4R1-221ENST00000582240 KIF21BO75037 1637 aa34.15■■■■□ 3.06
PPP4R1-221ENST00000582240 P3H3Q8IVL6 736 aa34.09■■■■□ 3.05
PPP4R1-221ENST00000582240 UBTFP17480 764 aaKnown RBP34.08■■■■□ 3.05
PPP4R1-221ENST00000582240 KIAA0556O60303 1618 aa34.07■■■■□ 3.04
PPP4R1-221ENST00000582240 TRHP20396 242 aaPredicted RBP34.06■■■■□ 3.04
PPP4R1-221ENST00000582240 GOLGA3Q08378 1498 aa34.01■■■■□ 3.03
PPP4R1-221ENST00000582240 ADCY10Q96PN6 1610 aa33.97■■■■□ 3.03
PPP4R1-221ENST00000582240 NPM1P06748 294 aaKnown RBP eCLIP33.95■■■■□ 3.03
PPP4R1-221ENST00000582240 UACAQ9BZF9 1416 aa33.9■■■■□ 3.02
PPP4R1-221ENST00000582240 PLB1Q6P1J6 1458 aa33.83■■■■□ 3.01
PPP4R1-221ENST00000582240 SAMD9Q5K651 1589 aa33.83■■■■□ 3.01
PPP4R1-221ENST00000582240 UHRF1BP1LA0JNW5 1464 aa33.8■■■■□ 3
PPP4R1-221ENST00000582240 FHOD3Q2V2M9 1422 aa33.79■■■■□ 3
PPP4R1-221ENST00000582240 ABCC2Q92887 1545 aa33.79■■■■□ 3
PPP4R1-221ENST00000582240 ARID3CA6NKF2 412 aa33.72■■■□□ 2.99
PPP4R1-221ENST00000582240 ABCA8O94911 1581 aa33.71■■■□□ 2.99
PPP4R1-221ENST00000582240 MAPKBP1O60336 1514 aa33.67■■■□□ 2.98
PPP4R1-221ENST00000582240 EFCAB5A4FU69 1503 aa33.65■■■□□ 2.98
PPP4R1-221ENST00000582240 KDM5BQ9UGL1 1544 aa33.65■■■□□ 2.98
PPP4R1-221ENST00000582240 FAM69CQ0P6D2 419 aa33.65■■■□□ 2.98
PPP4R1-221ENST00000582240 LOC105371045A0A1W2PR82 267 aa33.64■■■□□ 2.98
PPP4R1-221ENST00000582240 ARHGAP35Q9NRY4 1499 aa33.63■■■□□ 2.97
PPP4R1-221ENST00000582240 ASXL2Q76L83 1435 aa33.62■■■□□ 2.97
PPP4R1-221ENST00000582240 ZCCHC11Q5TAX3 1644 aaKnown RBP33.6■■■□□ 2.97
PPP4R1-221ENST00000582240 ABCC10Q5T3U5 1492 aa33.59■■■□□ 2.97
PPP4R1-221ENST00000582240 RAPGEF6Q8TEU7 1601 aa33.53■■■□□ 2.96
PPP4R1-221ENST00000582240 KIF13AQ9H1H9 1805 aa33.52■■■□□ 2.96
PPP4R1-221ENST00000582240 ATP10BO94823 1461 aa33.51■■■□□ 2.96
PPP4R1-221ENST00000582240 DIP2BQ9P265 1576 aa33.51■■■□□ 2.95
PPP4R1-221ENST00000582240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.49■■■□□ 2.95
PPP4R1-221ENST00000582240 HNRNPUL2Q1KMD3 747 aaKnown RBP33.49■■■□□ 2.95
PPP4R1-221ENST00000582240 ATP1B4Q9UN42 357 aaPredicted RBP33.48■■■□□ 2.95
PPP4R1-221ENST00000582240 NUP153P49790 1475 aaKnown RBP33.46■■■□□ 2.95
PPP4R1-221ENST00000582240 KCNH8Q96L42 1107 aa33.46■■■□□ 2.95
PPP4R1-221ENST00000582240 CLIP1P30622 1438 aa33.45■■■□□ 2.95
PPP4R1-221ENST00000582240 WDR7Q9Y4E6 1490 aa33.4■■■□□ 2.94
PPP4R1-221ENST00000582240 EPRSP07814 1512 aaKnown RBP33.39■■■□□ 2.94
PPP4R1-221ENST00000582240 FMN1Q68DA7 1419 aa33.39■■■□□ 2.94
PPP4R1-221ENST00000582240 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
PPP4R1-221ENST00000582240 GLI2P10070 1586 aa33.3■■■□□ 2.92
PPP4R1-221ENST00000582240 TSPOAP1O95153 1857 aa33.29■■■□□ 2.92
PPP4R1-221ENST00000582240 CDK13Q14004 1512 aaKnown RBP33.28■■■□□ 2.92
PPP4R1-221ENST00000582240 PLEKHD1A6NEE1 506 aa33.24■■■□□ 2.91
PPP4R1-221ENST00000582240 HECW1Q76N89 1606 aa33.21■■■□□ 2.91
PPP4R1-221ENST00000582240 PCF11O94913 1555 aaKnown RBP33.18■■■□□ 2.9
PPP4R1-221ENST00000582240 CASKIN1Q8WXD9 1431 aa33.18■■■□□ 2.9
PPP4R1-221ENST00000582240 MAP3K4Q9Y6R4 1608 aa33.16■■■□□ 2.9
PPP4R1-221ENST00000582240 CD109Q6YHK3 1445 aa33.14■■■□□ 2.9
PPP4R1-221ENST00000582240 PPRC1Q5VV67 1664 aaKnown RBP33.13■■■□□ 2.89
PPP4R1-221ENST00000582240 LRRIQ1Q96JM4 1722 aa33.09■■■□□ 2.89
PPP4R1-221ENST00000582240 CDK11AQ9UQ88 783 aaPredicted RBP33.05■■■□□ 2.88
PPP4R1-221ENST00000582240 FYCO1Q9BQS8 1478 aa33.05■■■□□ 2.88
PPP4R1-221ENST00000582240 CFAP43Q8NDM7 1665 aa33.04■■■□□ 2.88
PPP4R1-221ENST00000582240 ABCA9Q8IUA7 1624 aa33.01■■■□□ 2.87
PPP4R1-221ENST00000582240 TEX14Q8IWB6 1497 aa32.99■■■□□ 2.87
PPP4R1-221ENST00000582240 MAGI3Q5TCQ9 1506 aa32.99■■■□□ 2.87
PPP4R1-221ENST00000582240 KDM6BO15054 1643 aa32.97■■■□□ 2.87
PPP4R1-221ENST00000582240 CCDC18Q5T9S5 1454 aa32.97■■■□□ 2.87
PPP4R1-221ENST00000582240 COL17A1Q9UMD9 1497 aaPredicted RBP32.96■■■□□ 2.87
PPP4R1-221ENST00000582240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.96■■■□□ 2.87
PPP4R1-221ENST00000582240 TROQ12816 1431 aaPredicted RBP32.95■■■□□ 2.87
PPP4R1-221ENST00000582240 TTC37Q6PGP7 1564 aa32.91■■■□□ 2.86
PPP4R1-221ENST00000582240 KIF14Q15058 1648 aa32.88■■■□□ 2.85
PPP4R1-221ENST00000582240 VPS8Q8N3P4 1428 aa32.87■■■□□ 2.85
PPP4R1-221ENST00000582240 PLCH2O75038 1416 aa32.77■■■□□ 2.84
PPP4R1-221ENST00000582240 MTUS2Q5JR59 1369 aa32.76■■■□□ 2.83
PPP4R1-221ENST00000582240 NEO1Q92859 1461 aa32.74■■■□□ 2.83
PPP4R1-221ENST00000582240 FANCAO15360 1455 aa32.74■■■□□ 2.83
PPP4R1-221ENST00000582240 RAPGEF3O95398 923 aa32.73■■■□□ 2.83
PPP4R1-221ENST00000582240 AKNAQ7Z591 1439 aa32.72■■■□□ 2.83
PPP4R1-221ENST00000582240 PHLDB1Q86UU1 1377 aa32.7■■■□□ 2.83
PPP4R1-221ENST00000582240 ARAP3Q8WWN8 1544 aa32.7■■■□□ 2.83
PPP4R1-221ENST00000582240 EFCAB2Q5VUJ9 269 aa32.69■■■□□ 2.82
PPP4R1-221ENST00000582240 MYO5CQ9NQX4 1742 aa32.65■■■□□ 2.82
PPP4R1-221ENST00000582240 TIAM1Q13009 1591 aa32.64■■■□□ 2.82
PPP4R1-221ENST00000582240 ARHGAP5Q13017 1502 aa32.63■■■□□ 2.81
PPP4R1-221ENST00000582240 KANK4Q5T7N3 995 aaPredicted RBP32.63■■■□□ 2.81
PPP4R1-221ENST00000582240 EHBP1L1Q8N3D4 1523 aa32.6■■■□□ 2.81
PPP4R1-221ENST00000582240 DENND4BO75064 1496 aaPredicted RBP32.59■■■□□ 2.81
PPP4R1-221ENST00000582240 SCAPERQ9BY12 1400 aa32.59■■■□□ 2.81
PPP4R1-221ENST00000582240 CFAP74Q9C0B2 1584 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms