RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
SNORD3C-201ENST00000580533 CTTNBP2Q8WZ74 1663 aa19.03■□□□□ 0.64
SNORD3C-201ENST00000580533 IQGAP2Q13576 1575 aa19.01■□□□□ 0.63
SNORD3C-201ENST00000580533 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
SNORD3C-201ENST00000580533 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
SNORD3C-201ENST00000580533 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
SNORD3C-201ENST00000580533 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
SNORD3C-201ENST00000580533 CARMIL2Q6F5E8 1435 aa18.91■□□□□ 0.62
SNORD3C-201ENST00000580533 SHROOM2Q13796 1616 aa18.9■□□□□ 0.62
SNORD3C-201ENST00000580533 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
SNORD3C-201ENST00000580533 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
SNORD3C-201ENST00000580533 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
SNORD3C-201ENST00000580533 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
SNORD3C-201ENST00000580533 CLIP1P30622 1438 aa18.81■□□□□ 0.6
SNORD3C-201ENST00000580533 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
SNORD3C-201ENST00000580533 CEP162Q5TB80 1403 aa18.8■□□□□ 0.6
SNORD3C-201ENST00000580533 SAMD9Q5K651 1589 aa18.8■□□□□ 0.6
SNORD3C-201ENST00000580533 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
SNORD3C-201ENST00000580533 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
SNORD3C-201ENST00000580533 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
SNORD3C-201ENST00000580533 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
SNORD3C-201ENST00000580533 ARHGAP35Q9NRY4 1499 aa18.72■□□□□ 0.59
SNORD3C-201ENST00000580533 PTPRGP23470 1445 aa18.71■□□□□ 0.59
SNORD3C-201ENST00000580533 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
SNORD3C-201ENST00000580533 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
SNORD3C-201ENST00000580533 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
SNORD3C-201ENST00000580533 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
SNORD3C-201ENST00000580533 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
SNORD3C-201ENST00000580533 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
SNORD3C-201ENST00000580533 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
SNORD3C-201ENST00000580533 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
SNORD3C-201ENST00000580533 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
SNORD3C-201ENST00000580533 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
SNORD3C-201ENST00000580533 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
SNORD3C-201ENST00000580533 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
SNORD3C-201ENST00000580533 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
SNORD3C-201ENST00000580533 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
SNORD3C-201ENST00000580533 ABCC2Q92887 1545 aa18.55■□□□□ 0.56
SNORD3C-201ENST00000580533 ABCA8O94911 1581 aa18.55■□□□□ 0.56
SNORD3C-201ENST00000580533 FYCO1Q9BQS8 1478 aa18.54■□□□□ 0.56
SNORD3C-201ENST00000580533 HECW1Q76N89 1606 aa18.54■□□□□ 0.56
SNORD3C-201ENST00000580533 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
SNORD3C-201ENST00000580533 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNORD3C-201ENST00000580533 PLB1Q6P1J6 1458 aa18.52■□□□□ 0.56
SNORD3C-201ENST00000580533 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
SNORD3C-201ENST00000580533 CCDC18Q5T9S5 1454 aa18.49■□□□□ 0.55
SNORD3C-201ENST00000580533 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
SNORD3C-201ENST00000580533 APLP2Q06481 763 aa18.48■□□□□ 0.55
SNORD3C-201ENST00000580533 ADCY10Q96PN6 1610 aa18.47■□□□□ 0.55
SNORD3C-201ENST00000580533 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.54
SNORD3C-201ENST00000580533 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
SNORD3C-201ENST00000580533 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
SNORD3C-201ENST00000580533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
SNORD3C-201ENST00000580533 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
SNORD3C-201ENST00000580533 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
SNORD3C-201ENST00000580533 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
SNORD3C-201ENST00000580533 ZCCHC11Q5TAX3 1644 aaKnown RBP18.38■□□□□ 0.53
SNORD3C-201ENST00000580533 ATP10BO94823 1461 aa18.38■□□□□ 0.53
SNORD3C-201ENST00000580533 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
SNORD3C-201ENST00000580533 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
SNORD3C-201ENST00000580533 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
SNORD3C-201ENST00000580533 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
SNORD3C-201ENST00000580533 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.53
SNORD3C-201ENST00000580533 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
SNORD3C-201ENST00000580533 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
SNORD3C-201ENST00000580533 WDR7Q9Y4E6 1490 aa18.31■□□□□ 0.52
SNORD3C-201ENST00000580533 ASXL2Q76L83 1435 aa18.31■□□□□ 0.52
SNORD3C-201ENST00000580533 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
SNORD3C-201ENST00000580533 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
SNORD3C-201ENST00000580533 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
SNORD3C-201ENST00000580533 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
SNORD3C-201ENST00000580533 KIF14Q15058 1648 aa18.24■□□□□ 0.51
SNORD3C-201ENST00000580533 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
SNORD3C-201ENST00000580533 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
SNORD3C-201ENST00000580533 KCNH8Q96L42 1107 aa18.19■□□□□ 0.5
SNORD3C-201ENST00000580533 GLI2P10070 1586 aa18.17■□□□□ 0.5
SNORD3C-201ENST00000580533 MAGI3Q5TCQ9 1506 aa18.17■□□□□ 0.5
SNORD3C-201ENST00000580533 DIP2BQ9P265 1576 aa18.15■□□□□ 0.5
SNORD3C-201ENST00000580533 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
SNORD3C-201ENST00000580533 KANK4Q5T7N3 995 aaPredicted RBP18.14■□□□□ 0.49
SNORD3C-201ENST00000580533 ABCA9Q8IUA7 1624 aa18.13■□□□□ 0.49
SNORD3C-201ENST00000580533 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
SNORD3C-201ENST00000580533 NCOA2Q15596 1464 aa18.13■□□□□ 0.49
SNORD3C-201ENST00000580533 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
SNORD3C-201ENST00000580533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.497e-7■□□□□ 8.7
SNORD3C-201ENST00000580533 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
SNORD3C-201ENST00000580533 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
SNORD3C-201ENST00000580533 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
SNORD3C-201ENST00000580533 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.48
SNORD3C-201ENST00000580533 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
SNORD3C-201ENST00000580533 MYO5CQ9NQX4 1742 aa18.07■□□□□ 0.48
SNORD3C-201ENST00000580533 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
SNORD3C-201ENST00000580533 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
SNORD3C-201ENST00000580533 PLCH2O75038 1416 aa18.05■□□□□ 0.48
SNORD3C-201ENST00000580533 MYOM3Q5VTT5 1437 aa18.05■□□□□ 0.48
SNORD3C-201ENST00000580533 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
SNORD3C-201ENST00000580533 PREX2Q70Z35 1606 aa18.04■□□□□ 0.48
SNORD3C-201ENST00000580533 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
SNORD3C-201ENST00000580533 EFCAB2Q5VUJ9 269 aa18.03■□□□□ 0.48
SNORD3C-201ENST00000580533 CFDP1Q9UEE9 299 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms