RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman


Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.74□□□□□ -0.374e-72■■■■■ 112.4
SNORD3C-201ENST00000580533 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.45□□□□□ -0.421e-323■■■■■ 97.5
SNORD3C-201ENST00000580533 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.159e-43■■■■■ 67.1
SNORD3C-201ENST00000580533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.54□□□□□ -0.41e-14■■■■■ 39.8
SNORD3C-201ENST00000580533 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.17e-84■■■■■ 36.9
SNORD3C-201ENST00000580533 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.23□□□□□ -0.611e-15■■■■■ 36.3
SNORD3C-201ENST00000580533 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.293e-43■■■□□ 16.3
SNORD3C-201ENST00000580533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.461e-76■■■□□ 15.1
SNORD3C-201ENST00000580533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.23□□□□□ -0.616e-9■■□□□ 13
SNORD3C-201ENST00000580533 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.53e-15■■□□□ 12.9
SNORD3C-201ENST00000580533 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.479e-9■■□□□ 12.1
SNORD3C-201ENST00000580533 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.05□□□□□ -0.483e-8■■□□□ 11.5
SNORD3C-201ENST00000580533 SF3B1O75533 1304 aaKnown RBP eCLIP12.64□□□□□ -0.392e-9■□□□□ 11.3
SNORD3C-201ENST00000580533 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.352e-40■□□□□ 11
SNORD3C-201ENST00000580533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.04□□□□□ -0.649e-19■□□□□ 10.6
SNORD3C-201ENST00000580533 TROVE2P10155 538 aaKnown RBP eCLIP11.23□□□□□ -0.617e-20■□□□□ 9
SNORD3C-201ENST00000580533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.497e-7■□□□□ 8.7
SNORD3C-201ENST00000580533 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -03e-26■□□□□ 8.4
Retrieved 18 of 18 RNA–protein pairs in 5.6 ms