RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
SNORD3C-201ENST00000580533 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
SNORD3C-201ENST00000580533 ABCC9O60706 1549 aa23.41■■□□□ 1.34
SNORD3C-201ENST00000580533 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
SNORD3C-201ENST00000580533 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
SNORD3C-201ENST00000580533 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
SNORD3C-201ENST00000580533 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
SNORD3C-201ENST00000580533 NACADO15069 1562 aa22.88■■□□□ 1.25
SNORD3C-201ENST00000580533 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
SNORD3C-201ENST00000580533 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
SNORD3C-201ENST00000580533 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.13
SNORD3C-201ENST00000580533 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
SNORD3C-201ENST00000580533 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
SNORD3C-201ENST00000580533 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
SNORD3C-201ENST00000580533 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
SNORD3C-201ENST00000580533 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
SNORD3C-201ENST00000580533 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
SNORD3C-201ENST00000580533 SMARCA4P51532 1647 aa21.33■■□□□ 1
SNORD3C-201ENST00000580533 MROH2BQ7Z745 1585 aa21.22■□□□□ 0.99
SNORD3C-201ENST00000580533 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
SNORD3C-201ENST00000580533 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
SNORD3C-201ENST00000580533 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
SNORD3C-201ENST00000580533 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
SNORD3C-201ENST00000580533 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
SNORD3C-201ENST00000580533 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
SNORD3C-201ENST00000580533 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
SNORD3C-201ENST00000580533 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
SNORD3C-201ENST00000580533 WIZO95785 1651 aa21■□□□□ 0.95
SNORD3C-201ENST00000580533 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
SNORD3C-201ENST00000580533 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
SNORD3C-201ENST00000580533 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
SNORD3C-201ENST00000580533 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
SNORD3C-201ENST00000580533 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
SNORD3C-201ENST00000580533 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
SNORD3C-201ENST00000580533 CFTRP13569 1480 aa20.43■□□□□ 0.86
SNORD3C-201ENST00000580533 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
SNORD3C-201ENST00000580533 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
SNORD3C-201ENST00000580533 NESP48681 1621 aa20.32■□□□□ 0.84
SNORD3C-201ENST00000580533 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
SNORD3C-201ENST00000580533 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
SNORD3C-201ENST00000580533 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
SNORD3C-201ENST00000580533 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
SNORD3C-201ENST00000580533 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
SNORD3C-201ENST00000580533 MRC2Q9UBG0 1479 aa20.08■□□□□ 0.81
SNORD3C-201ENST00000580533 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
SNORD3C-201ENST00000580533 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
SNORD3C-201ENST00000580533 THOC2Q8NI27 1593 aaKnown RBP19.99■□□□□ 0.79
SNORD3C-201ENST00000580533 WDR62O43379 1518 aa19.98■□□□□ 0.79
SNORD3C-201ENST00000580533 URB2Q14146 1524 aaKnown RBP19.95■□□□□ 0.78
SNORD3C-201ENST00000580533 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
SNORD3C-201ENST00000580533 CUX2O14529 1486 aa19.9■□□□□ 0.78
SNORD3C-201ENST00000580533 CUX1P39880 1505 aa19.9■□□□□ 0.78
SNORD3C-201ENST00000580533 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
SNORD3C-201ENST00000580533 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
SNORD3C-201ENST00000580533 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
SNORD3C-201ENST00000580533 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
SNORD3C-201ENST00000580533 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
SNORD3C-201ENST00000580533 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
SNORD3C-201ENST00000580533 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
SNORD3C-201ENST00000580533 SOGA1O94964 1423 aa19.75■□□□□ 0.75
SNORD3C-201ENST00000580533 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
SNORD3C-201ENST00000580533 WDR97A6NE52 1622 aa19.68■□□□□ 0.74
SNORD3C-201ENST00000580533 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
SNORD3C-201ENST00000580533 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
SNORD3C-201ENST00000580533 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
SNORD3C-201ENST00000580533 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
SNORD3C-201ENST00000580533 EEA1Q15075 1411 aa19.54■□□□□ 0.72
SNORD3C-201ENST00000580533 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
SNORD3C-201ENST00000580533 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
SNORD3C-201ENST00000580533 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
SNORD3C-201ENST00000580533 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
SNORD3C-201ENST00000580533 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.72
SNORD3C-201ENST00000580533 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
SNORD3C-201ENST00000580533 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNORD3C-201ENST00000580533 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
SNORD3C-201ENST00000580533 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
SNORD3C-201ENST00000580533 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
SNORD3C-201ENST00000580533 CUL7Q14999 1698 aa19.39■□□□□ 0.69
SNORD3C-201ENST00000580533 SNAPC4Q5SXM2 1469 aa19.37■□□□□ 0.69
SNORD3C-201ENST00000580533 IGF1RP08069 1367 aa19.36■□□□□ 0.69
SNORD3C-201ENST00000580533 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
SNORD3C-201ENST00000580533 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
SNORD3C-201ENST00000580533 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
SNORD3C-201ENST00000580533 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
SNORD3C-201ENST00000580533 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
SNORD3C-201ENST00000580533 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
SNORD3C-201ENST00000580533 FAM9AQ8IZU1 332 aaPredicted RBP19.3■□□□□ 0.68
SNORD3C-201ENST00000580533 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
SNORD3C-201ENST00000580533 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
SNORD3C-201ENST00000580533 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SNORD3C-201ENST00000580533 PRXQ9BXM0 1461 aa19.24■□□□□ 0.67
SNORD3C-201ENST00000580533 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
SNORD3C-201ENST00000580533 KIF21BO75037 1637 aa19.22■□□□□ 0.67
SNORD3C-201ENST00000580533 CHD1O14646 1710 aa19.18■□□□□ 0.66
SNORD3C-201ENST00000580533 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
SNORD3C-201ENST00000580533 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
SNORD3C-201ENST00000580533 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
SNORD3C-201ENST00000580533 NUP160Q12769 1436 aa19.1■□□□□ 0.65
SNORD3C-201ENST00000580533 UBTFP17480 764 aaKnown RBP19.07■□□□□ 0.64
SNORD3C-201ENST00000580533 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms