RNA–Protein interactions for RNA: ENST00000580238.5

ATG13-226, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-226ENST00000580238 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
ATG13-226ENST00000580238 CSRNP3Q8WYN3 585 aa28.22■■■□□ 2.11
ATG13-226ENST00000580238 KIAA0586Q9BVV6 1533 aa28.19■■■□□ 2.1
ATG13-226ENST00000580238 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
ATG13-226ENST00000580238 ERCC6L2Q5T890 1561 aa28.16■■■□□ 2.1
ATG13-226ENST00000580238 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
ATG13-226ENST00000580238 JPH4Q96JJ6 628 aa28.12■■■□□ 2.09
ATG13-226ENST00000580238 PRG4Q92954 1404 aaPredicted RBP28.07■■■□□ 2.08
ATG13-226ENST00000580238 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
ATG13-226ENST00000580238 CTTNBP2Q8WZ74 1663 aa28.03■■■□□ 2.08
ATG13-226ENST00000580238 CYB5RLQ6IPT4 315 aa28.02■■■□□ 2.08
ATG13-226ENST00000580238 KIF21BO75037 1637 aa28.01■■■□□ 2.07
ATG13-226ENST00000580238 UGGT2Q9NYU1 1516 aa27.93■■■□□ 2.06
ATG13-226ENST00000580238 DISP1Q96F81 1524 aa27.9■■■□□ 2.06
ATG13-226ENST00000580238 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
ATG13-226ENST00000580238 GOLGA3Q08378 1498 aa27.83■■■□□ 2.05
ATG13-226ENST00000580238 KIAA0556O60303 1618 aa27.82■■■□□ 2.04
ATG13-226ENST00000580238 EHMT2Q96KQ7 1210 aa27.79■■■□□ 2.04
ATG13-226ENST00000580238 TNIKQ9UKE5 1360 aa27.77■■■□□ 2.04
ATG13-226ENST00000580238 PTPRGP23470 1445 aa27.74■■■□□ 2.03
ATG13-226ENST00000580238 SAMD9Q5K651 1589 aa27.7■■■□□ 2.03
ATG13-226ENST00000580238 UBTFP17480 764 aaKnown RBP27.7■■■□□ 2.02
ATG13-226ENST00000580238 TTBK1Q5TCY1 1321 aaPredicted RBP27.67■■■□□ 2.02
ATG13-226ENST00000580238 ADCY10Q96PN6 1610 aa27.67■■■□□ 2.02
ATG13-226ENST00000580238 RANGAP1P46060 587 aaPredicted RBP27.61■■■□□ 2.01
ATG13-226ENST00000580238 P3H3Q8IVL6 736 aa27.6■■■□□ 2.01
ATG13-226ENST00000580238 UACAQ9BZF9 1416 aa27.57■■■□□ 2
ATG13-226ENST00000580238 UHRF1BP1LA0JNW5 1464 aa27.56■■■□□ 2
ATG13-226ENST00000580238 EFCAB5A4FU69 1503 aa27.56■■■□□ 2
ATG13-226ENST00000580238 ABCC2Q92887 1545 aa27.53■■■□□ 2
ATG13-226ENST00000580238 PLB1Q6P1J6 1458 aa27.53■■■□□ 2
ATG13-226ENST00000580238 FHOD3Q2V2M9 1422 aa27.52■■■□□ 2
ATG13-226ENST00000580238 ABCA8O94911 1581 aa27.52■■■□□ 2
ATG13-226ENST00000580238 ARHGAP35Q9NRY4 1499 aa27.5■■□□□ 1.99
ATG13-226ENST00000580238 MAPKBP1O60336 1514 aa27.43■■□□□ 1.98
ATG13-226ENST00000580238 KDM5BQ9UGL1 1544 aa27.43■■□□□ 1.98
ATG13-226ENST00000580238 NPM1P06748 294 aaKnown RBP eCLIP27.42■■□□□ 1.98
ATG13-226ENST00000580238 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
ATG13-226ENST00000580238 ZCCHC11Q5TAX3 1644 aaKnown RBP27.38■■□□□ 1.97
ATG13-226ENST00000580238 RAPGEF6Q8TEU7 1601 aa27.38■■□□□ 1.97
ATG13-226ENST00000580238 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
ATG13-226ENST00000580238 CLIP1P30622 1438 aa27.33■■□□□ 1.97
ATG13-226ENST00000580238 KIF13AQ9H1H9 1805 aa27.3■■□□□ 1.96
ATG13-226ENST00000580238 ASXL2Q76L83 1435 aa27.3■■□□□ 1.96
ATG13-226ENST00000580238 NUP153P49790 1475 aaKnown RBP27.3■■□□□ 1.96
ATG13-226ENST00000580238 ABCC10Q5T3U5 1492 aa27.28■■□□□ 1.96
ATG13-226ENST00000580238 FMN1Q68DA7 1419 aa27.28■■□□□ 1.96
ATG13-226ENST00000580238 ATP10BO94823 1461 aa27.27■■□□□ 1.96
ATG13-226ENST00000580238 DIP2BQ9P265 1576 aa27.26■■□□□ 1.96
ATG13-226ENST00000580238 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
ATG13-226ENST00000580238 ARID3CA6NKF2 412 aa27.24■■□□□ 1.95
ATG13-226ENST00000580238 WDR7Q9Y4E6 1490 aa27.19■■□□□ 1.94
ATG13-226ENST00000580238 FAM69CQ0P6D2 419 aa27.18■■□□□ 1.94
ATG13-226ENST00000580238 HECW1Q76N89 1606 aa27.16■■□□□ 1.94
ATG13-226ENST00000580238 EPRSP07814 1512 aaKnown RBP27.16■■□□□ 1.94
ATG13-226ENST00000580238 PCF11O94913 1555 aaKnown RBP27.15■■□□□ 1.94
ATG13-226ENST00000580238 GLI2P10070 1586 aa27.14■■□□□ 1.93
ATG13-226ENST00000580238 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
ATG13-226ENST00000580238 CASKIN1Q8WXD9 1431 aa27.12■■□□□ 1.93
ATG13-226ENST00000580238 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
ATG13-226ENST00000580238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
ATG13-226ENST00000580238 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
ATG13-226ENST00000580238 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
ATG13-226ENST00000580238 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
ATG13-226ENST00000580238 KCNH8Q96L42 1107 aa27.03■■□□□ 1.92
ATG13-226ENST00000580238 MAP3K4Q9Y6R4 1608 aa27.03■■□□□ 1.92
ATG13-226ENST00000580238 TSPOAP1O95153 1857 aa27.02■■□□□ 1.92
ATG13-226ENST00000580238 PPRC1Q5VV67 1664 aaKnown RBP27■■□□□ 1.91
ATG13-226ENST00000580238 PLEKHD1A6NEE1 506 aa26.98■■□□□ 1.91
ATG13-226ENST00000580238 CCDC18Q5T9S5 1454 aa26.97■■□□□ 1.91
ATG13-226ENST00000580238 CFAP43Q8NDM7 1665 aa26.95■■□□□ 1.91
ATG13-226ENST00000580238 ABCA9Q8IUA7 1624 aa26.94■■□□□ 1.9
ATG13-226ENST00000580238 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
ATG13-226ENST00000580238 CD109Q6YHK3 1445 aa26.9■■□□□ 1.9
ATG13-226ENST00000580238 MAGI3Q5TCQ9 1506 aa26.9■■□□□ 1.9
ATG13-226ENST00000580238 TROQ12816 1431 aaPredicted RBP26.88■■□□□ 1.89
ATG13-226ENST00000580238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.87■■□□□ 1.89
ATG13-226ENST00000580238 CDK11AQ9UQ88 783 aaPredicted RBP26.87■■□□□ 1.89
ATG13-226ENST00000580238 TTC37Q6PGP7 1564 aa26.85■■□□□ 1.89
ATG13-226ENST00000580238 KIF14Q15058 1648 aa26.84■■□□□ 1.89
ATG13-226ENST00000580238 TEX14Q8IWB6 1497 aa26.81■■□□□ 1.88
ATG13-226ENST00000580238 KDM6BO15054 1643 aa26.75■■□□□ 1.87
ATG13-226ENST00000580238 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
ATG13-226ENST00000580238 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
ATG13-226ENST00000580238 PLCH2O75038 1416 aa26.69■■□□□ 1.86
ATG13-226ENST00000580238 MYO5CQ9NQX4 1742 aa26.69■■□□□ 1.86
ATG13-226ENST00000580238 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
ATG13-226ENST00000580238 EHBP1L1Q8N3D4 1523 aa26.68■■□□□ 1.86
ATG13-226ENST00000580238 NEO1Q92859 1461 aa26.68■■□□□ 1.86
ATG13-226ENST00000580238 MAP3K1Q13233 1512 aa26.67■■□□□ 1.86
ATG13-226ENST00000580238 ARAP3Q8WWN8 1544 aa26.65■■□□□ 1.86
ATG13-226ENST00000580238 FANCAO15360 1455 aa26.64■■□□□ 1.86
ATG13-226ENST00000580238 CDC42BPBQ9Y5S2 1711 aa26.62■■□□□ 1.85
ATG13-226ENST00000580238 PHLDB1Q86UU1 1377 aa26.62■■□□□ 1.85
ATG13-226ENST00000580238 CDC42BPAQ5VT25 1732 aa26.62■■□□□ 1.85
ATG13-226ENST00000580238 LRRC9Q6ZRR7 1453 aa26.62■■□□□ 1.85
ATG13-226ENST00000580238 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
ATG13-226ENST00000580238 CFAP74Q9C0B2 1584 aa26.6■■□□□ 1.85
ATG13-226ENST00000580238 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
ATG13-226ENST00000580238 KANK4Q5T7N3 995 aaPredicted RBP26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms