RNA–Protein interactions for RNA: ENST00000580238.5

ATG13-226, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-226ENST00000580238 NISCHQ9Y2I1 1504 aa40.84■■■■■ 4.13
ATG13-226ENST00000580238 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
ATG13-226ENST00000580238 ABCC9O60706 1549 aa35.28■■■■□ 3.24
ATG13-226ENST00000580238 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.04
ATG13-226ENST00000580238 NACADO15069 1562 aa33.99■■■■□ 3.03
ATG13-226ENST00000580238 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
ATG13-226ENST00000580238 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
ATG13-226ENST00000580238 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
ATG13-226ENST00000580238 DCAF1Q9Y4B6 1507 aa33.79■■■■□ 3
ATG13-226ENST00000580238 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
ATG13-226ENST00000580238 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
ATG13-226ENST00000580238 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
ATG13-226ENST00000580238 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
ATG13-226ENST00000580238 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
ATG13-226ENST00000580238 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
ATG13-226ENST00000580238 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
ATG13-226ENST00000580238 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
ATG13-226ENST00000580238 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
ATG13-226ENST00000580238 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
ATG13-226ENST00000580238 BAZ1AQ9NRL2 1556 aaPredicted RBP31.61■■■□□ 2.65
ATG13-226ENST00000580238 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
ATG13-226ENST00000580238 ATAD2BQ9ULI0 1458 aa31.44■■■□□ 2.62
ATG13-226ENST00000580238 NCAPD3P42695 1498 aa31.39■■■□□ 2.62
ATG13-226ENST00000580238 SMARCA2P51531 1590 aa31.37■■■□□ 2.61
ATG13-226ENST00000580238 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
ATG13-226ENST00000580238 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
ATG13-226ENST00000580238 RSF1Q96T23 1441 aaPredicted RBP31.19■■■□□ 2.58
ATG13-226ENST00000580238 WIZO95785 1651 aa31.17■■■□□ 2.58
ATG13-226ENST00000580238 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
ATG13-226ENST00000580238 TOP2AP11388 1531 aaKnown RBP30.82■■■□□ 2.52
ATG13-226ENST00000580238 NESP48681 1621 aa30.62■■■□□ 2.49
ATG13-226ENST00000580238 LAMC3Q9Y6N6 1575 aa30.52■■■□□ 2.48
ATG13-226ENST00000580238 CCDC88BA6NC98 1476 aa30.47■■■□□ 2.47
ATG13-226ENST00000580238 CADPSQ9ULU8 1353 aa30.47■■■□□ 2.47
ATG13-226ENST00000580238 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
ATG13-226ENST00000580238 CFTRP13569 1480 aa30.34■■■□□ 2.45
ATG13-226ENST00000580238 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
ATG13-226ENST00000580238 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
ATG13-226ENST00000580238 KIF21AQ7Z4S6 1674 aa30.26■■■□□ 2.43
ATG13-226ENST00000580238 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
ATG13-226ENST00000580238 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
ATG13-226ENST00000580238 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
ATG13-226ENST00000580238 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
ATG13-226ENST00000580238 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
ATG13-226ENST00000580238 CUX2O14529 1486 aa29.98■■■□□ 2.39
ATG13-226ENST00000580238 WDR62O43379 1518 aa29.91■■■□□ 2.38
ATG13-226ENST00000580238 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
ATG13-226ENST00000580238 TOPBP1Q92547 1522 aa29.67■■■□□ 2.34
ATG13-226ENST00000580238 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
ATG13-226ENST00000580238 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
ATG13-226ENST00000580238 CUX1P39880 1505 aa29.54■■■□□ 2.32
ATG13-226ENST00000580238 POLA1P09884 1462 aaPredicted RBP29.44■■■□□ 2.3
ATG13-226ENST00000580238 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
ATG13-226ENST00000580238 FGD5Q6ZNL6 1462 aa29.39■■■□□ 2.3
ATG13-226ENST00000580238 TARBP1Q13395 1621 aaKnown RBP29.37■■■□□ 2.29
ATG13-226ENST00000580238 WRNQ14191 1432 aaPredicted RBP eCLIP29.37■■■□□ 2.29
ATG13-226ENST00000580238 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
ATG13-226ENST00000580238 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
ATG13-226ENST00000580238 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
ATG13-226ENST00000580238 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
ATG13-226ENST00000580238 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
ATG13-226ENST00000580238 SOGA1O94964 1423 aa29.28■■■□□ 2.28
ATG13-226ENST00000580238 EIF4G3O43432 1585 aaKnown RBP29.2■■■□□ 2.26
ATG13-226ENST00000580238 WDR97A6NE52 1622 aa29.17■■■□□ 2.26
ATG13-226ENST00000580238 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.26
ATG13-226ENST00000580238 TDRD9Q8NDG6 1382 aaKnown RBP29.12■■■□□ 2.25
ATG13-226ENST00000580238 ABCA10Q8WWZ4 1543 aa29.11■■■□□ 2.25
ATG13-226ENST00000580238 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
ATG13-226ENST00000580238 GAPVD1Q14C86 1478 aa28.96■■■□□ 2.23
ATG13-226ENST00000580238 GRIN2BQ13224 1484 aa28.92■■■□□ 2.22
ATG13-226ENST00000580238 PBRM1Q86U86 1689 aa28.92■■■□□ 2.22
ATG13-226ENST00000580238 SNAPC4Q5SXM2 1469 aa28.89■■■□□ 2.22
ATG13-226ENST00000580238 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
ATG13-226ENST00000580238 MAGI1Q96QZ7 1491 aaPredicted RBP28.83■■■□□ 2.21
ATG13-226ENST00000580238 CHD1O14646 1710 aa28.8■■■□□ 2.2
ATG13-226ENST00000580238 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
ATG13-226ENST00000580238 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
ATG13-226ENST00000580238 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
ATG13-226ENST00000580238 SYNJ2O15056 1496 aa28.72■■■□□ 2.19
ATG13-226ENST00000580238 KIF27Q86VH2 1401 aa28.72■■■□□ 2.19
ATG13-226ENST00000580238 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
ATG13-226ENST00000580238 FBLN2P98095 1184 aa28.7■■■□□ 2.18
ATG13-226ENST00000580238 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
ATG13-226ENST00000580238 IGF1RP08069 1367 aa28.62■■■□□ 2.17
ATG13-226ENST00000580238 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
ATG13-226ENST00000580238 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
ATG13-226ENST00000580238 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
ATG13-226ENST00000580238 GRIN2AQ12879 1464 aa28.57■■■□□ 2.16
ATG13-226ENST00000580238 CUL7Q14999 1698 aa28.51■■■□□ 2.16
ATG13-226ENST00000580238 CLASP1Q7Z460 1538 aa28.51■■■□□ 2.15
ATG13-226ENST00000580238 CEP170Q5SW79 1584 aa28.45■■■□□ 2.15
ATG13-226ENST00000580238 NUP160Q12769 1436 aa28.45■■■□□ 2.15
ATG13-226ENST00000580238 CARMIL1Q5VZK9 1371 aa28.43■■■□□ 2.14
ATG13-226ENST00000580238 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
ATG13-226ENST00000580238 RIMBP3CA6NJZ7 1639 aa28.33■■■□□ 2.13
ATG13-226ENST00000580238 RIMBP3BA6NNM3 1639 aa28.33■■■□□ 2.13
ATG13-226ENST00000580238 RIMBP3Q9UFD9 1639 aa28.33■■■□□ 2.13
ATG13-226ENST00000580238 RAPGEF2Q9Y4G8 1499 aa28.27■■■□□ 2.12
ATG13-226ENST00000580238 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
ATG13-226ENST00000580238 EEA1Q15075 1411 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms