RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 PRG4Q92954 1404 aaPredicted RBP20.01■□□□□ 0.79
SSH2-208ENST00000579040 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
SSH2-208ENST00000579040 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
SSH2-208ENST00000579040 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
SSH2-208ENST00000579040 IQGAP2Q13576 1575 aa19.82■□□□□ 0.76
SSH2-208ENST00000579040 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
SSH2-208ENST00000579040 ADCY10Q96PN6 1610 aa19.79■□□□□ 0.76
SSH2-208ENST00000579040 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
SSH2-208ENST00000579040 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
SSH2-208ENST00000579040 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
SSH2-208ENST00000579040 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
SSH2-208ENST00000579040 PTPRGP23470 1445 aa19.71■□□□□ 0.75
SSH2-208ENST00000579040 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
SSH2-208ENST00000579040 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
SSH2-208ENST00000579040 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
SSH2-208ENST00000579040 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
SSH2-208ENST00000579040 DISP1Q96F81 1524 aa19.66■□□□□ 0.74
SSH2-208ENST00000579040 DIP2BQ9P265 1576 aa19.66■□□□□ 0.74
SSH2-208ENST00000579040 KIAA0556O60303 1618 aa19.63■□□□□ 0.73
SSH2-208ENST00000579040 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
SSH2-208ENST00000579040 UHRF1BP1LA0JNW5 1464 aa19.62■□□□□ 0.73
SSH2-208ENST00000579040 PRXQ9BXM0 1461 aa19.62■□□□□ 0.73
SSH2-208ENST00000579040 FAM69CQ0P6D2 419 aa19.6■□□□□ 0.73
SSH2-208ENST00000579040 UACAQ9BZF9 1416 aa19.58■□□□□ 0.72
SSH2-208ENST00000579040 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
SSH2-208ENST00000579040 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
SSH2-208ENST00000579040 PLB1Q6P1J6 1458 aa19.53■□□□□ 0.72
SSH2-208ENST00000579040 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.72
SSH2-208ENST00000579040 TSPOAP1O95153 1857 aa19.52■□□□□ 0.71
SSH2-208ENST00000579040 ASXL2Q76L83 1435 aa19.51■□□□□ 0.71
SSH2-208ENST00000579040 EEA1Q15075 1411 aa19.5■□□□□ 0.71
SSH2-208ENST00000579040 GLI2P10070 1586 aa19.49■□□□□ 0.71
SSH2-208ENST00000579040 ZCCHC11Q5TAX3 1644 aaKnown RBP19.49■□□□□ 0.71
SSH2-208ENST00000579040 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
SSH2-208ENST00000579040 KDM6BO15054 1643 aa19.44■□□□□ 0.7
SSH2-208ENST00000579040 ABCA8O94911 1581 aa19.44■□□□□ 0.7
SSH2-208ENST00000579040 PPRC1Q5VV67 1664 aaKnown RBP19.42■□□□□ 0.7
SSH2-208ENST00000579040 EPRSP07814 1512 aaKnown RBP19.41■□□□□ 0.7
SSH2-208ENST00000579040 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
SSH2-208ENST00000579040 SAMD9Q5K651 1589 aa19.38■□□□□ 0.69
SSH2-208ENST00000579040 WDR7Q9Y4E6 1490 aa19.37■□□□□ 0.69
SSH2-208ENST00000579040 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
SSH2-208ENST00000579040 KIF21BO75037 1637 aa19.34■□□□□ 0.69
SSH2-208ENST00000579040 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
SSH2-208ENST00000579040 TEX14Q8IWB6 1497 aa19.32■□□□□ 0.68
SSH2-208ENST00000579040 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
SSH2-208ENST00000579040 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
SSH2-208ENST00000579040 P3H3Q8IVL6 736 aa19.26■□□□□ 0.67
SSH2-208ENST00000579040 ATP10BO94823 1461 aa19.23■□□□□ 0.67
SSH2-208ENST00000579040 EFCAB5A4FU69 1503 aa19.23■□□□□ 0.67
SSH2-208ENST00000579040 MAGI3Q5TCQ9 1506 aa19.22■□□□□ 0.67
SSH2-208ENST00000579040 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
SSH2-208ENST00000579040 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
SSH2-208ENST00000579040 KCNH8Q96L42 1107 aa19.19■□□□□ 0.66
SSH2-208ENST00000579040 COL17A1Q9UMD9 1497 aaPredicted RBP19.19■□□□□ 0.66
SSH2-208ENST00000579040 FHOD3Q2V2M9 1422 aa19.18■□□□□ 0.66
SSH2-208ENST00000579040 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
SSH2-208ENST00000579040 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
SSH2-208ENST00000579040 ARID3CA6NKF2 412 aa19.14■□□□□ 0.65
SSH2-208ENST00000579040 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
SSH2-208ENST00000579040 KDM4FA0A1W2PPD8 638 aa19.09■□□□□ 0.65
SSH2-208ENST00000579040 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.64
SSH2-208ENST00000579040 ARAP3Q8WWN8 1544 aa19.08■□□□□ 0.64
SSH2-208ENST00000579040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
SSH2-208ENST00000579040 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
SSH2-208ENST00000579040 PHLDB1Q86UU1 1377 aa19.06■□□□□ 0.64
SSH2-208ENST00000579040 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
SSH2-208ENST00000579040 NEO1Q92859 1461 aa19.03■□□□□ 0.64
SSH2-208ENST00000579040 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
SSH2-208ENST00000579040 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
SSH2-208ENST00000579040 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.63
SSH2-208ENST00000579040 HECW1Q76N89 1606 aa19.01■□□□□ 0.63
SSH2-208ENST00000579040 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
SSH2-208ENST00000579040 CDK13Q14004 1512 aaKnown RBP18.98■□□□□ 0.63
SSH2-208ENST00000579040 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
SSH2-208ENST00000579040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSH2-208ENST00000579040 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
SSH2-208ENST00000579040 FRMPD1Q5SYB0 1578 aa18.92■□□□□ 0.62
SSH2-208ENST00000579040 FANCAO15360 1455 aa18.9■□□□□ 0.62
SSH2-208ENST00000579040 RICTORQ6R327 1708 aa18.89■□□□□ 0.61
SSH2-208ENST00000579040 LRRIQ1Q96JM4 1722 aa18.88■□□□□ 0.61
SSH2-208ENST00000579040 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
SSH2-208ENST00000579040 AKNAQ7Z591 1439 aa18.88■□□□□ 0.61
SSH2-208ENST00000579040 DENND4BO75064 1496 aaPredicted RBP18.87■□□□□ 0.61
SSH2-208ENST00000579040 RAPGEF3O95398 923 aa18.87■□□□□ 0.61
SSH2-208ENST00000579040 MYO5CQ9NQX4 1742 aa18.87■□□□□ 0.61
SSH2-208ENST00000579040 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
SSH2-208ENST00000579040 KIF14Q15058 1648 aa18.85■□□□□ 0.61
SSH2-208ENST00000579040 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
SSH2-208ENST00000579040 ARHGEF40Q8TER5 1519 aa18.84■□□□□ 0.61
SSH2-208ENST00000579040 PLCH2O75038 1416 aa18.83■□□□□ 0.61
SSH2-208ENST00000579040 TROQ12816 1431 aaPredicted RBP18.83■□□□□ 0.61
SSH2-208ENST00000579040 ZMYM4Q5VZL5 1548 aa18.83■□□□□ 0.6
SSH2-208ENST00000579040 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.6
SSH2-208ENST00000579040 CCDC18Q5T9S5 1454 aa18.82■□□□□ 0.6
SSH2-208ENST00000579040 CLIP1P30622 1438 aa18.82■□□□□ 0.6
SSH2-208ENST00000579040 ADAMTSL3P82987 1691 aa18.8■□□□□ 0.6
SSH2-208ENST00000579040 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
SSH2-208ENST00000579040 BCORL1Q5H9F3 1711 aa18.78■□□□□ 0.6
SSH2-208ENST00000579040 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms