RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 KIAA0586Q9BVV6 1533 aa21.84■■□□□ 1.09
SSH2-205ENST00000577483 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
SSH2-205ENST00000577483 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
SSH2-205ENST00000577483 TRHP20396 242 aaPredicted RBP21.8■■□□□ 1.08
SSH2-205ENST00000577483 IQGAP2Q13576 1575 aa21.76■■□□□ 1.07
SSH2-205ENST00000577483 CTTNBP2Q8WZ74 1663 aa21.72■■□□□ 1.07
SSH2-205ENST00000577483 ADCY10Q96PN6 1610 aa21.72■■□□□ 1.07
SSH2-205ENST00000577483 RAPGEF2Q9Y4G8 1499 aa21.72■■□□□ 1.07
SSH2-205ENST00000577483 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
SSH2-205ENST00000577483 DISP1Q96F81 1524 aa21.61■■□□□ 1.05
SSH2-205ENST00000577483 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
SSH2-205ENST00000577483 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
SSH2-205ENST00000577483 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
SSH2-205ENST00000577483 KIAA0556O60303 1618 aa21.58■■□□□ 1.04
SSH2-205ENST00000577483 MAPKBP1O60336 1514 aa21.58■■□□□ 1.04
SSH2-205ENST00000577483 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
SSH2-205ENST00000577483 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
SSH2-205ENST00000577483 PTPRGP23470 1445 aa21.54■■□□□ 1.04
SSH2-205ENST00000577483 DIP2BQ9P265 1576 aa21.52■■□□□ 1.04
SSH2-205ENST00000577483 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
SSH2-205ENST00000577483 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
SSH2-205ENST00000577483 ABCC2Q92887 1545 aa21.45■■□□□ 1.02
SSH2-205ENST00000577483 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.02
SSH2-205ENST00000577483 NPM1P06748 294 aaKnown RBP eCLIP21.44■■□□□ 1.02
SSH2-205ENST00000577483 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
SSH2-205ENST00000577483 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
SSH2-205ENST00000577483 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
SSH2-205ENST00000577483 EEA1Q15075 1411 aa21.41■■□□□ 1.02
SSH2-205ENST00000577483 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
SSH2-205ENST00000577483 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
SSH2-205ENST00000577483 GOLGA3Q08378 1498 aa21.39■■□□□ 1.01
SSH2-205ENST00000577483 KDM5BQ9UGL1 1544 aa21.36■■□□□ 1.01
SSH2-205ENST00000577483 FAM69CQ0P6D2 419 aa21.36■■□□□ 1.01
SSH2-205ENST00000577483 KIF21BO75037 1637 aa21.35■■□□□ 1.01
SSH2-205ENST00000577483 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
SSH2-205ENST00000577483 ABCA8O94911 1581 aa21.34■■□□□ 1.01
SSH2-205ENST00000577483 PLB1Q6P1J6 1458 aa21.34■■□□□ 1.01
SSH2-205ENST00000577483 ASXL2Q76L83 1435 aa21.33■■□□□ 1.01
SSH2-205ENST00000577483 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1
SSH2-205ENST00000577483 GLI2P10070 1586 aa21.29■■□□□ 1
SSH2-205ENST00000577483 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
SSH2-205ENST00000577483 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
SSH2-205ENST00000577483 KDM6BO15054 1643 aa21.24■□□□□ 0.99
SSH2-205ENST00000577483 EPRSP07814 1512 aaKnown RBP21.23■□□□□ 0.99
SSH2-205ENST00000577483 RAPGEF6Q8TEU7 1601 aa21.2■□□□□ 0.98
SSH2-205ENST00000577483 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
SSH2-205ENST00000577483 WDR7Q9Y4E6 1490 aa21.19■□□□□ 0.98
SSH2-205ENST00000577483 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
SSH2-205ENST00000577483 EFCAB5A4FU69 1503 aa21.14■□□□□ 0.97
SSH2-205ENST00000577483 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
SSH2-205ENST00000577483 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
SSH2-205ENST00000577483 ATP10BO94823 1461 aa21.1■□□□□ 0.97
SSH2-205ENST00000577483 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
SSH2-205ENST00000577483 ARID3CA6NKF2 412 aa21.06■□□□□ 0.96
SSH2-205ENST00000577483 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
SSH2-205ENST00000577483 TEX14Q8IWB6 1497 aa21.05■□□□□ 0.96
SSH2-205ENST00000577483 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
SSH2-205ENST00000577483 ABCA9Q8IUA7 1624 aa21.02■□□□□ 0.96
SSH2-205ENST00000577483 MAGI3Q5TCQ9 1506 aa21■□□□□ 0.95
SSH2-205ENST00000577483 KCNH8Q96L42 1107 aa21■□□□□ 0.95
SSH2-205ENST00000577483 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
SSH2-205ENST00000577483 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
SSH2-205ENST00000577483 CD109Q6YHK3 1445 aa20.98■□□□□ 0.95
SSH2-205ENST00000577483 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
SSH2-205ENST00000577483 CDK13Q14004 1512 aaKnown RBP20.91■□□□□ 0.94
SSH2-205ENST00000577483 HECW1Q76N89 1606 aa20.91■□□□□ 0.94
SSH2-205ENST00000577483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
SSH2-205ENST00000577483 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
SSH2-205ENST00000577483 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
SSH2-205ENST00000577483 TTC37Q6PGP7 1564 aa20.86■□□□□ 0.93
SSH2-205ENST00000577483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.93
SSH2-205ENST00000577483 ARAP3Q8WWN8 1544 aa20.83■□□□□ 0.92
SSH2-205ENST00000577483 PCF11O94913 1555 aaKnown RBP20.82■□□□□ 0.92
SSH2-205ENST00000577483 FRMPD1Q5SYB0 1578 aa20.79■□□□□ 0.92
SSH2-205ENST00000577483 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
SSH2-205ENST00000577483 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
SSH2-205ENST00000577483 NEO1Q92859 1461 aa20.78■□□□□ 0.92
SSH2-205ENST00000577483 CFAP74Q9C0B2 1584 aa20.78■□□□□ 0.92
SSH2-205ENST00000577483 KIF14Q15058 1648 aa20.77■□□□□ 0.92
SSH2-205ENST00000577483 MYO5CQ9NQX4 1742 aa20.77■□□□□ 0.92
SSH2-205ENST00000577483 RICTORQ6R327 1708 aa20.76■□□□□ 0.91
SSH2-205ENST00000577483 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
SSH2-205ENST00000577483 ATP1B4Q9UN42 357 aaPredicted RBP20.72■□□□□ 0.91
SSH2-205ENST00000577483 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
SSH2-205ENST00000577483 FANCAO15360 1455 aa20.7■□□□□ 0.9
SSH2-205ENST00000577483 CLIP1P30622 1438 aa20.7■□□□□ 0.9
SSH2-205ENST00000577483 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
SSH2-205ENST00000577483 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
SSH2-205ENST00000577483 TROQ12816 1431 aaPredicted RBP20.66■□□□□ 0.9
SSH2-205ENST00000577483 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
SSH2-205ENST00000577483 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
SSH2-205ENST00000577483 CDC42BPBQ9Y5S2 1711 aa20.66■□□□□ 0.9
SSH2-205ENST00000577483 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
SSH2-205ENST00000577483 PLCH2O75038 1416 aa20.63■□□□□ 0.89
SSH2-205ENST00000577483 ARHGEF40Q8TER5 1519 aa20.62■□□□□ 0.89
SSH2-205ENST00000577483 DENND4BO75064 1496 aaPredicted RBP20.61■□□□□ 0.89
SSH2-205ENST00000577483 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
SSH2-205ENST00000577483 PREX2Q70Z35 1606 aa20.61■□□□□ 0.89
SSH2-205ENST00000577483 CDC42BPAQ5VT25 1732 aa20.61■□□□□ 0.89
SSH2-205ENST00000577483 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms