RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
ABR-235ENST00000576964 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
ABR-235ENST00000576964 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
ABR-235ENST00000576964 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
ABR-235ENST00000576964 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
ABR-235ENST00000576964 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
ABR-235ENST00000576964 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
ABR-235ENST00000576964 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
ABR-235ENST00000576964 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
ABR-235ENST00000576964 KIF21BO75037 1637 aa17.66■□□□□ 0.42
ABR-235ENST00000576964 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
ABR-235ENST00000576964 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.42
ABR-235ENST00000576964 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
ABR-235ENST00000576964 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
ABR-235ENST00000576964 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
ABR-235ENST00000576964 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
ABR-235ENST00000576964 UGGT2Q9NYU1 1516 aa17.59■□□□□ 0.41
ABR-235ENST00000576964 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
ABR-235ENST00000576964 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
ABR-235ENST00000576964 PTPRGP23470 1445 aa17.54■□□□□ 0.4
ABR-235ENST00000576964 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
ABR-235ENST00000576964 DISP1Q96F81 1524 aa17.52■□□□□ 0.4
ABR-235ENST00000576964 KIAA0556O60303 1618 aa17.51■□□□□ 0.39
ABR-235ENST00000576964 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
ABR-235ENST00000576964 P3H3Q8IVL6 736 aa17.46■□□□□ 0.39
ABR-235ENST00000576964 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
ABR-235ENST00000576964 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
ABR-235ENST00000576964 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
ABR-235ENST00000576964 FHOD3Q2V2M9 1422 aa17.37■□□□□ 0.37
ABR-235ENST00000576964 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
ABR-235ENST00000576964 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
ABR-235ENST00000576964 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
ABR-235ENST00000576964 ABCC2Q92887 1545 aa17.36■□□□□ 0.37
ABR-235ENST00000576964 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
ABR-235ENST00000576964 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
ABR-235ENST00000576964 CLIP1P30622 1438 aa17.3■□□□□ 0.36
ABR-235ENST00000576964 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
ABR-235ENST00000576964 ABCA8O94911 1581 aa17.29■□□□□ 0.36
ABR-235ENST00000576964 LOC105371045A0A1W2PR82 267 aa17.29■□□□□ 0.36
ABR-235ENST00000576964 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
ABR-235ENST00000576964 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
ABR-235ENST00000576964 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
ABR-235ENST00000576964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
ABR-235ENST00000576964 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
ABR-235ENST00000576964 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
ABR-235ENST00000576964 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
ABR-235ENST00000576964 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
ABR-235ENST00000576964 ZCCHC11Q5TAX3 1644 aaKnown RBP17.22■□□□□ 0.35
ABR-235ENST00000576964 ASXL2Q76L83 1435 aa17.21■□□□□ 0.35
ABR-235ENST00000576964 FAM69CQ0P6D2 419 aa17.19■□□□□ 0.34
ABR-235ENST00000576964 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
ABR-235ENST00000576964 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
ABR-235ENST00000576964 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
ABR-235ENST00000576964 ATP10BO94823 1461 aa17.17■□□□□ 0.34
ABR-235ENST00000576964 WDR7Q9Y4E6 1490 aa17.17■□□□□ 0.34
ABR-235ENST00000576964 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
ABR-235ENST00000576964 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
ABR-235ENST00000576964 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
ABR-235ENST00000576964 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
ABR-235ENST00000576964 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
ABR-235ENST00000576964 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
ABR-235ENST00000576964 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
ABR-235ENST00000576964 PCF11O94913 1555 aaKnown RBP17.1■□□□□ 0.33
ABR-235ENST00000576964 CCDC18Q5T9S5 1454 aa17.09■□□□□ 0.33
ABR-235ENST00000576964 KIF13AQ9H1H9 1805 aa17.08■□□□□ 0.33
ABR-235ENST00000576964 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
ABR-235ENST00000576964 GLI2P10070 1586 aa17.06■□□□□ 0.32
ABR-235ENST00000576964 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
ABR-235ENST00000576964 CD109Q6YHK3 1445 aa17■□□□□ 0.31
ABR-235ENST00000576964 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
ABR-235ENST00000576964 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
ABR-235ENST00000576964 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
ABR-235ENST00000576964 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
ABR-235ENST00000576964 TROQ12816 1431 aaPredicted RBP16.97■□□□□ 0.31
ABR-235ENST00000576964 APLP2Q06481 763 aa16.97■□□□□ 0.31
ABR-235ENST00000576964 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
ABR-235ENST00000576964 KIF14Q15058 1648 aa16.95■□□□□ 0.3
ABR-235ENST00000576964 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
ABR-235ENST00000576964 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
ABR-235ENST00000576964 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
ABR-235ENST00000576964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABR-235ENST00000576964 TTC37Q6PGP7 1564 aa16.88■□□□□ 0.29
ABR-235ENST00000576964 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
ABR-235ENST00000576964 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
ABR-235ENST00000576964 KDM6BO15054 1643 aa16.87■□□□□ 0.29
ABR-235ENST00000576964 PPRC1Q5VV67 1664 aaKnown RBP16.87■□□□□ 0.29
ABR-235ENST00000576964 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
ABR-235ENST00000576964 NEO1Q92859 1461 aa16.85■□□□□ 0.29
ABR-235ENST00000576964 MAP3K1Q13233 1512 aa16.85■□□□□ 0.29
ABR-235ENST00000576964 PLCH2O75038 1416 aa16.84■□□□□ 0.29
ABR-235ENST00000576964 FANCAO15360 1455 aa16.84■□□□□ 0.29
ABR-235ENST00000576964 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
ABR-235ENST00000576964 EFCAB2Q5VUJ9 269 aa16.83■□□□□ 0.28
ABR-235ENST00000576964 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
ABR-235ENST00000576964 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
ABR-235ENST00000576964 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
ABR-235ENST00000576964 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
ABR-235ENST00000576964 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
ABR-235ENST00000576964 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
ABR-235ENST00000576964 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1187.5 ms