RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-233	ENST00000575934	PRG4	Q92954	1404 aa	Predicted RBP	35.58	■■■■□ 3.29
ABR-233	ENST00000575934	JPH4	Q96JJ6	628 aa		35.56	■■■■□ 3.28
ABR-233	ENST00000575934	KIAA0586	Q9BVV6	1533 aa		35.47	■■■■□ 3.27
ABR-233	ENST00000575934	CARMIL1	Q5VZK9	1371 aa		35.39	■■■■□ 3.26
ABR-233	ENST00000575934	KIF13A	Q9H1H9	1805 aa		35.27	■■■■□ 3.24
ABR-233	ENST00000575934	ADCY10	Q96PN6	1610 aa		35.23	■■■■□ 3.23
ABR-233	ENST00000575934	IQGAP2	Q13576	1575 aa		35.19	■■■■□ 3.22
ABR-233	ENST00000575934	MAPKBP1	O60336	1514 aa		35.15	■■■■□ 3.22
ABR-233	ENST00000575934	RAPGEF2	Q9Y4G8	1499 aa		35.13	■■■■□ 3.21
ABR-233	ENST00000575934	CARMIL2	Q6F5E8	1435 aa		35.07	■■■■□ 3.21
ABR-233	ENST00000575934	NPM1	P06748	294 aa	Known RBP eCLIP	35.06	■■■■□ 3.2
ABR-233	ENST00000575934	ABCC10	Q5T3U5	1492 aa		35.05	■■■■□ 3.2
ABR-233	ENST00000575934	PTPRG	P23470	1445 aa		35.05	■■■■□ 3.2
ABR-233	ENST00000575934	TNIK	Q9UKE5	1360 aa		35.02	■■■■□ 3.2
ABR-233	ENST00000575934	DIP2B	Q9P265	1576 aa		35.01	■■■■□ 3.2
ABR-233	ENST00000575934	DISP1	Q96F81	1524 aa		34.99	■■■■□ 3.19
ABR-233	ENST00000575934	UGGT2	Q9NYU1	1516 aa		34.97	■■■■□ 3.19
ABR-233	ENST00000575934	CTTNBP2	Q8WZ74	1663 aa		34.95	■■■■□ 3.18
ABR-233	ENST00000575934	FAM69C	Q0P6D2	419 aa		34.92	■■■■□ 3.18
ABR-233	ENST00000575934	ABCC2	Q92887	1545 aa		34.89	■■■■□ 3.18
ABR-233	ENST00000575934	KIAA0556	O60303	1618 aa		34.88	■■■■□ 3.17
ABR-233	ENST00000575934	TTBK1	Q5TCY1	1321 aa	Predicted RBP	34.87	■■■■□ 3.17
ABR-233	ENST00000575934	UHRF1BP1L	A0JNW5	1464 aa		34.87	■■■■□ 3.17
ABR-233	ENST00000575934	PRX	Q9BXM0	1461 aa		34.84	■■■■□ 3.17
ABR-233	ENST00000575934	UACA	Q9BZF9	1416 aa		34.81	■■■■□ 3.16
ABR-233	ENST00000575934	TSPOAP1	O95153	1857 aa		34.78	■■■■□ 3.16
ABR-233	ENST00000575934	ASXL2	Q76L83	1435 aa		34.72	■■■■□ 3.15
ABR-233	ENST00000575934	KDM5B	Q9UGL1	1544 aa		34.71	■■■■□ 3.15
ABR-233	ENST00000575934	PLB1	Q6P1J6	1458 aa		34.71	■■■■□ 3.15
ABR-233	ENST00000575934	GOLGA3	Q08378	1498 aa		34.68	■■■■□ 3.14
ABR-233	ENST00000575934	ZCCHC11	Q5TAX3	1644 aa	Known RBP	34.66	■■■■□ 3.14
ABR-233	ENST00000575934	GLI2	P10070	1586 aa		34.66	■■■■□ 3.14
ABR-233	ENST00000575934	KDM6B	O15054	1643 aa		34.63	■■■■□ 3.13
ABR-233	ENST00000575934	PPRC1	Q5VV67	1664 aa	Known RBP	34.6	■■■■□ 3.13
ABR-233	ENST00000575934	ABCA8	O94911	1581 aa		34.55	■■■■□ 3.12
ABR-233	ENST00000575934	AEBP2	Q6ZN18	517 aa	Predicted RBP	34.54	■■■■□ 3.12
ABR-233	ENST00000575934	CSRNP3	Q8WYN3	585 aa		34.54	■■■■□ 3.12
ABR-233	ENST00000575934	EPRS	P07814	1512 aa	Known RBP	34.53	■■■■□ 3.12
ABR-233	ENST00000575934	EEA1	Q15075	1411 aa		34.51	■■■■□ 3.12
ABR-233	ENST00000575934	MAP3K4	Q9Y6R4	1608 aa		34.51	■■■■□ 3.11
ABR-233	ENST00000575934	WDR7	Q9Y4E6	1490 aa		34.44	■■■■□ 3.1
ABR-233	ENST00000575934	SAMD9	Q5K651	1589 aa		34.41	■■■■□ 3.1
ABR-233	ENST00000575934	TEX14	Q8IWB6	1497 aa		34.33	■■■■□ 3.09
ABR-233	ENST00000575934	CFAP43	Q8NDM7	1665 aa		34.29	■■■■□ 3.08
ABR-233	ENST00000575934	P3H3	Q8IVL6	736 aa		34.28	■■■■□ 3.08
ABR-233	ENST00000575934	KIF21B	O75037	1637 aa		34.28	■■■■□ 3.08
ABR-233	ENST00000575934	COL17A1	Q9UMD9	1497 aa	Predicted RBP	34.25	■■■■□ 3.07
ABR-233	ENST00000575934	RAPGEF6	Q8TEU7	1601 aa		34.22	■■■■□ 3.07
ABR-233	ENST00000575934	FAM9A	Q8IZU1	332 aa	Predicted RBP	34.22	■■■■□ 3.07
ABR-233	ENST00000575934	ATP10B	O94823	1461 aa		34.2	■■■■□ 3.07
ABR-233	ENST00000575934	MAGI3	Q5TCQ9	1506 aa		34.19	■■■■□ 3.06
ABR-233	ENST00000575934	CD109	Q6YHK3	1445 aa		34.17	■■■■□ 3.06
ABR-233	ENST00000575934	KCNH8	Q96L42	1107 aa		34.16	■■■■□ 3.06
ABR-233	ENST00000575934	KDM4F	A0A1W2PPD8	638 aa		34.1	■■■■□ 3.05
ABR-233	ENST00000575934	ARID3C	A6NKF2	412 aa		34.1	■■■■□ 3.05
ABR-233	ENST00000575934	FHOD3	Q2V2M9	1422 aa		34.1	■■■■□ 3.05
ABR-233	ENST00000575934	CHIC1	Q5VXU3	224 aa		34.09	■■■■□ 3.05
ABR-233	ENST00000575934	EFCAB5	A4FU69	1503 aa		34.09	■■■■□ 3.05
ABR-233	ENST00000575934	NUP153	P49790	1475 aa	Known RBP	34.06	■■■■□ 3.04
ABR-233	ENST00000575934	ABCA9	Q8IUA7	1624 aa		34.05	■■■■□ 3.04
ABR-233	ENST00000575934	RANGAP1	P46060	587 aa	Predicted RBP	34.05	■■■■□ 3.04
ABR-233	ENST00000575934	ADGRL1	O94910	1474 aa		33.94	■■■■□ 3.02
ABR-233	ENST00000575934	ARAP3	Q8WWN8	1544 aa		33.92	■■■■□ 3.02
ABR-233	ENST00000575934	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.9	■■■■□ 3.02
ABR-233	ENST00000575934	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.9	■■■■□ 3.02
ABR-233	ENST00000575934	UBTF	P17480	764 aa	Known RBP	33.84	■■■■□ 3.01
ABR-233	ENST00000575934	PHLDB1	Q86UU1	1377 aa		33.84	■■■■□ 3.01
ABR-233	ENST00000575934	EHMT2	Q96KQ7	1210 aa		33.81	■■■■□ 3
ABR-233	ENST00000575934	NEO1	Q92859	1461 aa		33.81	■■■■□ 3
ABR-233	ENST00000575934	ARHGAP35	Q9NRY4	1499 aa		33.79	■■■■□ 3
ABR-233	ENST00000575934	PLEKHD1	A6NEE1	506 aa		33.77	■■■■□ 3
ABR-233	ENST00000575934	CDK13	Q14004	1512 aa	Known RBP	33.74	■■■□□ 2.99
ABR-233	ENST00000575934	FMN1	Q68DA7	1419 aa		33.73	■■■□□ 2.99
ABR-233	ENST00000575934	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	33.73	■■■□□ 2.99
ABR-233	ENST00000575934	HECW1	Q76N89	1606 aa		33.71	■■■□□ 2.99
ABR-233	ENST00000575934	FRMPD1	Q5SYB0	1578 aa		33.69	■■■□□ 2.98
ABR-233	ENST00000575934	TTC37	Q6PGP7	1564 aa		33.69	■■■□□ 2.98
ABR-233	ENST00000575934	CFAP74	Q9C0B2	1584 aa		33.66	■■■□□ 2.98
ABR-233	ENST00000575934	RAPGEF3	O95398	923 aa		33.63	■■■□□ 2.97
ABR-233	ENST00000575934	RICTOR	Q6R327	1708 aa		33.61	■■■□□ 2.97
ABR-233	ENST00000575934	FANCA	O15360	1455 aa		33.59	■■■□□ 2.97
ABR-233	ENST00000575934	LRRIQ1	Q96JM4	1722 aa		33.59	■■■□□ 2.97
ABR-233	ENST00000575934	AKNA	Q7Z591	1439 aa		33.58	■■■□□ 2.97
ABR-233	ENST00000575934	DENND4B	O75064	1496 aa	Predicted RBP	33.54	■■■□□ 2.96
ABR-233	ENST00000575934	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.51	■■■□□ 2.95
ABR-233	ENST00000575934	MYO5C	Q9NQX4	1742 aa		33.5	■■■□□ 2.95
ABR-233	ENST00000575934	ARHGEF40	Q8TER5	1519 aa		33.5	■■■□□ 2.95
ABR-233	ENST00000575934	ADAMTSL3	P82987	1691 aa		33.48	■■■□□ 2.95
ABR-233	ENST00000575934	PLCH2	O75038	1416 aa		33.47	■■■□□ 2.95
ABR-233	ENST00000575934	KIF14	Q15058	1648 aa		33.47	■■■□□ 2.95
ABR-233	ENST00000575934	ZMYM4	Q5VZL5	1548 aa		33.46	■■■□□ 2.95
ABR-233	ENST00000575934	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.45	■■■□□ 2.95
ABR-233	ENST00000575934	PCF11	O94913	1555 aa	Known RBP	33.45	■■■□□ 2.95
ABR-233	ENST00000575934	BCORL1	Q5H9F3	1711 aa		33.45	■■■□□ 2.94
ABR-233	ENST00000575934	TRO	Q12816	1431 aa	Predicted RBP	33.44	■■■□□ 2.94
ABR-233	ENST00000575934	HECW2	Q9P2P5	1572 aa		33.43	■■■□□ 2.94
ABR-233	ENST00000575934	CASKIN1	Q8WXD9	1431 aa		33.4	■■■□□ 2.94
ABR-233	ENST00000575934	CCDC18	Q5T9S5	1454 aa		33.37	■■■□□ 2.93
ABR-233	ENST00000575934	CLIP1	P30622	1438 aa		33.36	■■■□□ 2.93
ABR-233	ENST00000575934	ZFYVE16	Q7Z3T8	1539 aa		33.35	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms