RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 NISCHQ9Y2I1 1504 aa51.05■■■■■ 5.76
ABR-233ENST00000575934 CCDC180Q9P1Z9 1646 aa45.79■■■■■ 4.92
ABR-233ENST00000575934 ABCC9O60706 1549 aa45.38■■■■■ 4.86
ABR-233ENST00000575934 RB1CC1Q8TDY2 1594 aa43.39■■■■■ 4.54
ABR-233ENST00000575934 NACADO15069 1562 aa43.17■■■■■ 4.5
ABR-233ENST00000575934 DCAF8L2P0C7V8 631 aa42.78■■■■■ 4.44
ABR-233ENST00000575934 MYO15BQ96JP2 1530 aa42.69■■■■■ 4.42
ABR-233ENST00000575934 UNC13AQ9UPW8 1703 aa42.53■■■■■ 4.4
ABR-233ENST00000575934 ZCCHC6Q5VYS8 1495 aaKnown RBP42.39■■■■■ 4.38
ABR-233ENST00000575934 DNAJC5BQ9UF47 199 aa42.29■■■■■ 4.36
ABR-233ENST00000575934 DCAF1Q9Y4B6 1507 aa42.23■■■■■ 4.35
ABR-233ENST00000575934 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
ABR-233ENST00000575934 BICRAQ9NZM4 1560 aa42.14■■■■■ 4.34
ABR-233ENST00000575934 SCRIBQ14160 1630 aa41.65■■■■■ 4.26
ABR-233ENST00000575934 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
ABR-233ENST00000575934 CC2D2AQ9P2K1 1620 aa41.08■■■■■ 4.17
ABR-233ENST00000575934 EIF4G1Q04637 1599 aaKnown RBP41.06■■■■■ 4.16
ABR-233ENST00000575934 CECR2Q9BXF3 1484 aa40.87■■■■■ 4.13
ABR-233ENST00000575934 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
ABR-233ENST00000575934 SMARCA4P51532 1647 aa39.8■■■■□ 3.96
ABR-233ENST00000575934 ATAD2BQ9ULI0 1458 aa39.73■■■■□ 3.95
ABR-233ENST00000575934 SMARCA2P51531 1590 aa39.66■■■■□ 3.94
ABR-233ENST00000575934 BAZ1AQ9NRL2 1556 aaPredicted RBP39.63■■■■□ 3.93
ABR-233ENST00000575934 HMGXB3Q12766 1538 aa39.6■■■■□ 3.93
ABR-233ENST00000575934 PEG3Q9GZU2 1588 aa39.44■■■■□ 3.9
ABR-233ENST00000575934 BAZ1BQ9UIG0 1483 aaKnown RBP39.35■■■■□ 3.89
ABR-233ENST00000575934 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
ABR-233ENST00000575934 ERCC6Q03468 1493 aa39.16■■■■□ 3.86
ABR-233ENST00000575934 NESP48681 1621 aa39.08■■■■□ 3.85
ABR-233ENST00000575934 CUX2O14529 1486 aa39.06■■■■□ 3.84
ABR-233ENST00000575934 LAMC3Q9Y6N6 1575 aa38.91■■■■□ 3.82
ABR-233ENST00000575934 WIZO95785 1651 aa38.9■■■■□ 3.82
ABR-233ENST00000575934 THOC2Q8NI27 1593 aaKnown RBP38.72■■■■□ 3.79
ABR-233ENST00000575934 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
ABR-233ENST00000575934 DNAJC5Q9H3Z4 198 aa38.65■■■■□ 3.78
ABR-233ENST00000575934 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
ABR-233ENST00000575934 RSF1Q96T23 1441 aaPredicted RBP38.59■■■■□ 3.77
ABR-233ENST00000575934 CADPSQ9ULU8 1353 aa38.58■■■■□ 3.77
ABR-233ENST00000575934 TOP2AP11388 1531 aaKnown RBP38.43■■■■□ 3.74
ABR-233ENST00000575934 MRC2Q9UBG0 1479 aa38.28■■■■□ 3.72
ABR-233ENST00000575934 WDR62O43379 1518 aa38.23■■■■□ 3.71
ABR-233ENST00000575934 CFTRP13569 1480 aa38.23■■■■□ 3.71
ABR-233ENST00000575934 CEP164Q9UPV0 1460 aa38.19■■■■□ 3.7
ABR-233ENST00000575934 FANCD2Q9BXW9 1451 aa38.15■■■■□ 3.7
ABR-233ENST00000575934 PRDM2Q13029 1718 aa38.04■■■■□ 3.68
ABR-233ENST00000575934 CCDC88BA6NC98 1476 aa37.94■■■■□ 3.66
ABR-233ENST00000575934 URB2Q14146 1524 aaKnown RBP37.85■■■■□ 3.65
ABR-233ENST00000575934 TOPBP1Q92547 1522 aa37.49■■■■□ 3.59
ABR-233ENST00000575934 ABCC8Q09428 1581 aa37.42■■■■□ 3.58
ABR-233ENST00000575934 IFT140Q96RY7 1462 aa37.41■■■■□ 3.58
ABR-233ENST00000575934 DNMBPQ6XZF7 1577 aa37.4■■■■□ 3.58
ABR-233ENST00000575934 ZNF608Q9ULD9 1512 aaPredicted RBP37.31■■■■□ 3.56
ABR-233ENST00000575934 OSCARQ8IYS5 282 aa37.22■■■■□ 3.55
ABR-233ENST00000575934 EIF4G3O43432 1585 aaKnown RBP37.19■■■■□ 3.54
ABR-233ENST00000575934 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
ABR-233ENST00000575934 POLA1P09884 1462 aaPredicted RBP37.12■■■■□ 3.53
ABR-233ENST00000575934 TRIM41Q8WV44 630 aa37■■■■□ 3.51
ABR-233ENST00000575934 AQRO60306 1485 aaKnown RBP eCLIP36.98■■■■□ 3.51
ABR-233ENST00000575934 SUPT5HO00267 1087 aaKnown RBP36.96■■■■□ 3.51
ABR-233ENST00000575934 CUX1P39880 1505 aa36.95■■■■□ 3.5
ABR-233ENST00000575934 RAD54L2Q9Y4B4 1467 aa36.94■■■■□ 3.5
ABR-233ENST00000575934 FGD5Q6ZNL6 1462 aa36.92■■■■□ 3.5
ABR-233ENST00000575934 SOGA1O94964 1423 aa36.9■■■■□ 3.5
ABR-233ENST00000575934 CHD1O14646 1710 aa36.9■■■■□ 3.5
ABR-233ENST00000575934 WDR97A6NE52 1622 aa36.85■■■■□ 3.49
ABR-233ENST00000575934 RIMBP3CA6NJZ7 1639 aa36.83■■■■□ 3.49
ABR-233ENST00000575934 RIMBP3BA6NNM3 1639 aa36.83■■■■□ 3.49
ABR-233ENST00000575934 RIMBP3Q9UFD9 1639 aa36.83■■■■□ 3.49
ABR-233ENST00000575934 TDRD9Q8NDG6 1382 aaKnown RBP36.78■■■■□ 3.48
ABR-233ENST00000575934 ARHGEF11O15085 1522 aa36.71■■■■□ 3.47
ABR-233ENST00000575934 SNAPC4Q5SXM2 1469 aa36.65■■■■□ 3.46
ABR-233ENST00000575934 FBLN2P98095 1184 aa36.6■■■■□ 3.45
ABR-233ENST00000575934 GRIN2BQ13224 1484 aa36.59■■■■□ 3.45
ABR-233ENST00000575934 MAGI1Q96QZ7 1491 aaPredicted RBP36.59■■■■□ 3.45
ABR-233ENST00000575934 PBRM1Q86U86 1689 aa36.57■■■■□ 3.44
ABR-233ENST00000575934 ABCA10Q8WWZ4 1543 aa36.54■■■■□ 3.44
ABR-233ENST00000575934 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
ABR-233ENST00000575934 GAPVD1Q14C86 1478 aa36.5■■■■□ 3.43
ABR-233ENST00000575934 BIVM-ERCC5R4GMW8 1640 aa36.49■■■■□ 3.43
ABR-233ENST00000575934 TOP2BQ02880 1626 aa36.45■■■■□ 3.43
ABR-233ENST00000575934 CLASP1Q7Z460 1538 aa36.44■■■■□ 3.42
ABR-233ENST00000575934 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
ABR-233ENST00000575934 SYNJ1O43426 1573 aa36.43■■■■□ 3.42
ABR-233ENST00000575934 CHMP7Q8WUX9 453 aaPredicted RBP36.41■■■■□ 3.42
ABR-233ENST00000575934 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
ABR-233ENST00000575934 ARAP1Q96P48 1450 aa36.37■■■■□ 3.41
ABR-233ENST00000575934 CYB5RLQ6IPT4 315 aa36.31■■■■□ 3.4
ABR-233ENST00000575934 ADAMTS12P58397 1594 aa36.19■■■■□ 3.38
ABR-233ENST00000575934 GRIN2AQ12879 1464 aa36.13■■■■□ 3.37
ABR-233ENST00000575934 ERICH3Q5RHP9 1530 aa36.09■■■■□ 3.37
ABR-233ENST00000575934 FHAD1B1AJZ9 1412 aa36.04■■■■□ 3.36
ABR-233ENST00000575934 CEP170Q5SW79 1584 aa36.02■■■■□ 3.36
ABR-233ENST00000575934 NUP160Q12769 1436 aa36.01■■■■□ 3.36
ABR-233ENST00000575934 SHROOM2Q13796 1616 aa35.88■■■■□ 3.33
ABR-233ENST00000575934 ERCC6L2Q5T890 1561 aa35.86■■■■□ 3.33
ABR-233ENST00000575934 TRHP20396 242 aaPredicted RBP35.79■■■■□ 3.32
ABR-233ENST00000575934 RUSC2Q8N2Y8 1516 aa35.68■■■■□ 3.3
ABR-233ENST00000575934 KIF27Q86VH2 1401 aa35.68■■■■□ 3.3
ABR-233ENST00000575934 CUL7Q14999 1698 aa35.65■■■■□ 3.3
ABR-233ENST00000575934 IGF1RP08069 1367 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms