RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
LITAF-216ENST00000574848 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
LITAF-216ENST00000574848 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
LITAF-216ENST00000574848 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
LITAF-216ENST00000574848 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
LITAF-216ENST00000574848 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
LITAF-216ENST00000574848 ADCY10Q96PN6 1610 aa18.07■□□□□ 0.48
LITAF-216ENST00000574848 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
LITAF-216ENST00000574848 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
LITAF-216ENST00000574848 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
LITAF-216ENST00000574848 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
LITAF-216ENST00000574848 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.48
LITAF-216ENST00000574848 KIF13AQ9H1H9 1805 aa18.01■□□□□ 0.47
LITAF-216ENST00000574848 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
LITAF-216ENST00000574848 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
LITAF-216ENST00000574848 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
LITAF-216ENST00000574848 PTPRGP23470 1445 aa17.97■□□□□ 0.47
LITAF-216ENST00000574848 DIP2BQ9P265 1576 aa17.94■□□□□ 0.46
LITAF-216ENST00000574848 UHRF1BP1LA0JNW5 1464 aa17.94■□□□□ 0.46
LITAF-216ENST00000574848 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
LITAF-216ENST00000574848 ABCC2Q92887 1545 aa17.92■□□□□ 0.46
LITAF-216ENST00000574848 EEA1Q15075 1411 aa17.91■□□□□ 0.46
LITAF-216ENST00000574848 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
LITAF-216ENST00000574848 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
LITAF-216ENST00000574848 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
LITAF-216ENST00000574848 KDM5BQ9UGL1 1544 aa17.84■□□□□ 0.45
LITAF-216ENST00000574848 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
LITAF-216ENST00000574848 PLB1Q6P1J6 1458 aa17.81■□□□□ 0.44
LITAF-216ENST00000574848 ZCCHC11Q5TAX3 1644 aaKnown RBP17.8■□□□□ 0.44
LITAF-216ENST00000574848 GLI2P10070 1586 aa17.8■□□□□ 0.44
LITAF-216ENST00000574848 ABCA8O94911 1581 aa17.79■□□□□ 0.44
LITAF-216ENST00000574848 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
LITAF-216ENST00000574848 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
LITAF-216ENST00000574848 KIF21BO75037 1637 aa17.79■□□□□ 0.44
LITAF-216ENST00000574848 FAM69CQ0P6D2 419 aa17.78■□□□□ 0.44
LITAF-216ENST00000574848 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
LITAF-216ENST00000574848 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
LITAF-216ENST00000574848 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
LITAF-216ENST00000574848 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
LITAF-216ENST00000574848 TSPOAP1O95153 1857 aa17.69■□□□□ 0.42
LITAF-216ENST00000574848 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
LITAF-216ENST00000574848 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
LITAF-216ENST00000574848 KDM6BO15054 1643 aa17.68■□□□□ 0.42
LITAF-216ENST00000574848 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
LITAF-216ENST00000574848 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
LITAF-216ENST00000574848 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
LITAF-216ENST00000574848 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
LITAF-216ENST00000574848 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
LITAF-216ENST00000574848 ATP10BO94823 1461 aa17.58■□□□□ 0.41
LITAF-216ENST00000574848 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
LITAF-216ENST00000574848 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
LITAF-216ENST00000574848 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
LITAF-216ENST00000574848 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
LITAF-216ENST00000574848 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
LITAF-216ENST00000574848 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
LITAF-216ENST00000574848 CD109Q6YHK3 1445 aa17.49■□□□□ 0.39
LITAF-216ENST00000574848 ARHGAP35Q9NRY4 1499 aa17.47■□□□□ 0.39
LITAF-216ENST00000574848 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
LITAF-216ENST00000574848 HECW1Q76N89 1606 aa17.42■□□□□ 0.38
LITAF-216ENST00000574848 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
LITAF-216ENST00000574848 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
LITAF-216ENST00000574848 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
LITAF-216ENST00000574848 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
LITAF-216ENST00000574848 ARAP3Q8WWN8 1544 aa17.41■□□□□ 0.38
LITAF-216ENST00000574848 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
LITAF-216ENST00000574848 PHLDB1Q86UU1 1377 aa17.38■□□□□ 0.37
LITAF-216ENST00000574848 NEO1Q92859 1461 aa17.37■□□□□ 0.37
LITAF-216ENST00000574848 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
LITAF-216ENST00000574848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.37
LITAF-216ENST00000574848 TTC37Q6PGP7 1564 aa17.34■□□□□ 0.37
LITAF-216ENST00000574848 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.37
LITAF-216ENST00000574848 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.36
LITAF-216ENST00000574848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
LITAF-216ENST00000574848 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
LITAF-216ENST00000574848 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
LITAF-216ENST00000574848 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
LITAF-216ENST00000574848 KDM4FA0A1W2PPD8 638 aa17.31■□□□□ 0.36
LITAF-216ENST00000574848 PLEKHD1A6NEE1 506 aa17.31■□□□□ 0.36
LITAF-216ENST00000574848 PCF11O94913 1555 aaKnown RBP17.3■□□□□ 0.36
LITAF-216ENST00000574848 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
LITAF-216ENST00000574848 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.35
LITAF-216ENST00000574848 FANCAO15360 1455 aa17.26■□□□□ 0.35
LITAF-216ENST00000574848 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
LITAF-216ENST00000574848 KIF14Q15058 1648 aa17.25■□□□□ 0.35
LITAF-216ENST00000574848 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
LITAF-216ENST00000574848 FYCO1Q9BQS8 1478 aa17.25■□□□□ 0.35
LITAF-216ENST00000574848 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
LITAF-216ENST00000574848 TROQ12816 1431 aaPredicted RBP17.24■□□□□ 0.35
LITAF-216ENST00000574848 CLIP1P30622 1438 aa17.23■□□□□ 0.35
LITAF-216ENST00000574848 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
LITAF-216ENST00000574848 AKNAQ7Z591 1439 aa17.22■□□□□ 0.35
LITAF-216ENST00000574848 PLCH2O75038 1416 aa17.21■□□□□ 0.35
LITAF-216ENST00000574848 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.35
LITAF-216ENST00000574848 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
LITAF-216ENST00000574848 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
LITAF-216ENST00000574848 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
LITAF-216ENST00000574848 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
LITAF-216ENST00000574848 PREX2Q70Z35 1606 aa17.15■□□□□ 0.34
LITAF-216ENST00000574848 ATP1B4Q9UN42 357 aaPredicted RBP17.15■□□□□ 0.34
LITAF-216ENST00000574848 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms