RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 PRG4Q92954 1404 aaPredicted RBP21.79■■□□□ 1.08
NPLOC4-213ENST00000573519 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
NPLOC4-213ENST00000573519 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
NPLOC4-213ENST00000573519 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.06
NPLOC4-213ENST00000573519 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
NPLOC4-213ENST00000573519 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
NPLOC4-213ENST00000573519 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
NPLOC4-213ENST00000573519 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
NPLOC4-213ENST00000573519 CARMIL2Q6F5E8 1435 aa21.51■■□□□ 1.03
NPLOC4-213ENST00000573519 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
NPLOC4-213ENST00000573519 PTPRGP23470 1445 aa21.47■■□□□ 1.03
NPLOC4-213ENST00000573519 TNIKQ9UKE5 1360 aa21.46■■□□□ 1.03
NPLOC4-213ENST00000573519 DISP1Q96F81 1524 aa21.41■■□□□ 1.02
NPLOC4-213ENST00000573519 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.02
NPLOC4-213ENST00000573519 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
NPLOC4-213ENST00000573519 CTTNBP2Q8WZ74 1663 aa21.39■■□□□ 1.01
NPLOC4-213ENST00000573519 MAPKBP1O60336 1514 aa21.38■■□□□ 1.01
NPLOC4-213ENST00000573519 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
NPLOC4-213ENST00000573519 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
NPLOC4-213ENST00000573519 KIAA0556O60303 1618 aa21.35■■□□□ 1.01
NPLOC4-213ENST00000573519 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
NPLOC4-213ENST00000573519 ABCC10Q5T3U5 1492 aa21.33■■□□□ 1.01
NPLOC4-213ENST00000573519 UACAQ9BZF9 1416 aa21.31■■□□□ 1
NPLOC4-213ENST00000573519 ABCC2Q92887 1545 aa21.3■■□□□ 1
NPLOC4-213ENST00000573519 DIP2BQ9P265 1576 aa21.3■■□□□ 1
NPLOC4-213ENST00000573519 FAM9AQ8IZU1 332 aaPredicted RBP21.29■■□□□ 1
NPLOC4-213ENST00000573519 GOLGA3Q08378 1498 aa21.28■■□□□ 1
NPLOC4-213ENST00000573519 EEA1Q15075 1411 aa21.28■■□□□ 1
NPLOC4-213ENST00000573519 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
NPLOC4-213ENST00000573519 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
NPLOC4-213ENST00000573519 PLB1Q6P1J6 1458 aa21.2■□□□□ 0.98
NPLOC4-213ENST00000573519 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
NPLOC4-213ENST00000573519 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
NPLOC4-213ENST00000573519 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
NPLOC4-213ENST00000573519 ZCCHC11Q5TAX3 1644 aaKnown RBP21.18■□□□□ 0.98
NPLOC4-213ENST00000573519 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
NPLOC4-213ENST00000573519 RANGAP1P46060 587 aaPredicted RBP21.15■□□□□ 0.98
NPLOC4-213ENST00000573519 ABCA8O94911 1581 aa21.12■□□□□ 0.97
NPLOC4-213ENST00000573519 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
NPLOC4-213ENST00000573519 KIF21BO75037 1637 aa21.09■□□□□ 0.97
NPLOC4-213ENST00000573519 GLI2P10070 1586 aa21.09■□□□□ 0.97
NPLOC4-213ENST00000573519 EPRSP07814 1512 aaKnown RBP21.09■□□□□ 0.97
NPLOC4-213ENST00000573519 SAMD9Q5K651 1589 aa21.08■□□□□ 0.97
NPLOC4-213ENST00000573519 KDM6BO15054 1643 aa21.07■□□□□ 0.96
NPLOC4-213ENST00000573519 ARID3CA6NKF2 412 aa21.06■□□□□ 0.96
NPLOC4-213ENST00000573519 WDR7Q9Y4E6 1490 aa21.06■□□□□ 0.96
NPLOC4-213ENST00000573519 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
NPLOC4-213ENST00000573519 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
NPLOC4-213ENST00000573519 PPRC1Q5VV67 1664 aaKnown RBP21.01■□□□□ 0.95
NPLOC4-213ENST00000573519 MAP3K4Q9Y6R4 1608 aa21■□□□□ 0.95
NPLOC4-213ENST00000573519 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
NPLOC4-213ENST00000573519 FHOD3Q2V2M9 1422 aa21■□□□□ 0.95
NPLOC4-213ENST00000573519 RAPGEF6Q8TEU7 1601 aa20.97■□□□□ 0.95
NPLOC4-213ENST00000573519 ATP10BO94823 1461 aa20.95■□□□□ 0.94
NPLOC4-213ENST00000573519 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
NPLOC4-213ENST00000573519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
NPLOC4-213ENST00000573519 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
NPLOC4-213ENST00000573519 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
NPLOC4-213ENST00000573519 CD109Q6YHK3 1445 aa20.91■□□□□ 0.94
NPLOC4-213ENST00000573519 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.94
NPLOC4-213ENST00000573519 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
NPLOC4-213ENST00000573519 COL17A1Q9UMD9 1497 aaPredicted RBP20.85■□□□□ 0.93
NPLOC4-213ENST00000573519 MAGI3Q5TCQ9 1506 aa20.84■□□□□ 0.93
NPLOC4-213ENST00000573519 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
NPLOC4-213ENST00000573519 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
NPLOC4-213ENST00000573519 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
NPLOC4-213ENST00000573519 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
NPLOC4-213ENST00000573519 FMN1Q68DA7 1419 aa20.77■□□□□ 0.91
NPLOC4-213ENST00000573519 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
NPLOC4-213ENST00000573519 KDM4FA0A1W2PPD8 638 aa20.72■□□□□ 0.91
NPLOC4-213ENST00000573519 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
NPLOC4-213ENST00000573519 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
NPLOC4-213ENST00000573519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.65■□□□□ 0.9
NPLOC4-213ENST00000573519 NEO1Q92859 1461 aa20.65■□□□□ 0.9
NPLOC4-213ENST00000573519 PHLDB1Q86UU1 1377 aa20.65■□□□□ 0.9
NPLOC4-213ENST00000573519 ADGRL1O94910 1474 aa20.64■□□□□ 0.89
NPLOC4-213ENST00000573519 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
NPLOC4-213ENST00000573519 CDK11AQ9UQ88 783 aaPredicted RBP20.62■□□□□ 0.89
NPLOC4-213ENST00000573519 RAPGEF3O95398 923 aa20.61■□□□□ 0.89
NPLOC4-213ENST00000573519 FANCAO15360 1455 aa20.59■□□□□ 0.89
NPLOC4-213ENST00000573519 CLIP1P30622 1438 aa20.59■□□□□ 0.89
NPLOC4-213ENST00000573519 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.88
NPLOC4-213ENST00000573519 CFAP74Q9C0B2 1584 aa20.57■□□□□ 0.88
NPLOC4-213ENST00000573519 AKNAQ7Z591 1439 aa20.56■□□□□ 0.88
NPLOC4-213ENST00000573519 LRRIQ1Q96JM4 1722 aa20.56■□□□□ 0.88
NPLOC4-213ENST00000573519 CASKIN1Q8WXD9 1431 aa20.55■□□□□ 0.88
NPLOC4-213ENST00000573519 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
NPLOC4-213ENST00000573519 KIF14Q15058 1648 aa20.53■□□□□ 0.88
NPLOC4-213ENST00000573519 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
NPLOC4-213ENST00000573519 FRMPD1Q5SYB0 1578 aa20.53■□□□□ 0.88
NPLOC4-213ENST00000573519 PLCH2O75038 1416 aa20.52■□□□□ 0.87
NPLOC4-213ENST00000573519 CCDC18Q5T9S5 1454 aa20.51■□□□□ 0.87
NPLOC4-213ENST00000573519 FYCO1Q9BQS8 1478 aa20.5■□□□□ 0.87
NPLOC4-213ENST00000573519 MYO5CQ9NQX4 1742 aa20.49■□□□□ 0.87
NPLOC4-213ENST00000573519 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
NPLOC4-213ENST00000573519 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
NPLOC4-213ENST00000573519 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
NPLOC4-213ENST00000573519 ARID4BQ4LE39 1312 aaPredicted RBP20.45■□□□□ 0.86
NPLOC4-213ENST00000573519 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
NPLOC4-213ENST00000573519 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms