RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
NPLOC4-211ENST00000573212 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
NPLOC4-211ENST00000573212 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
NPLOC4-211ENST00000573212 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-211ENST00000573212 FHAD1B1AJZ9 1412 aa14.65□□□□□ -0.06
NPLOC4-211ENST00000573212 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
NPLOC4-211ENST00000573212 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
NPLOC4-211ENST00000573212 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
NPLOC4-211ENST00000573212 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
NPLOC4-211ENST00000573212 MSH5O43196 834 aa14.6□□□□□ -0.07
NPLOC4-211ENST00000573212 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
NPLOC4-211ENST00000573212 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
NPLOC4-211ENST00000573212 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
NPLOC4-211ENST00000573212 PRG4Q92954 1404 aaPredicted RBP14.57□□□□□ -0.08
NPLOC4-211ENST00000573212 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
NPLOC4-211ENST00000573212 FAM69CQ0P6D2 419 aa14.5□□□□□ -0.09
NPLOC4-211ENST00000573212 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
NPLOC4-211ENST00000573212 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
NPLOC4-211ENST00000573212 KIF13AQ9H1H9 1805 aa14.45□□□□□ -0.1
NPLOC4-211ENST00000573212 IGF1RP08069 1367 aa14.45□□□□□ -0.1
NPLOC4-211ENST00000573212 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
NPLOC4-211ENST00000573212 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
NPLOC4-211ENST00000573212 KIAA0586Q9BVV6 1533 aa14.41□□□□□ -0.1
NPLOC4-211ENST00000573212 ZBTB22O15209 634 aa14.41□□□□□ -0.1
NPLOC4-211ENST00000573212 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
NPLOC4-211ENST00000573212 KDM4FA0A1W2PPD8 638 aa14.39□□□□□ -0.11
NPLOC4-211ENST00000573212 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-211ENST00000573212 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
NPLOC4-211ENST00000573212 ADCY10Q96PN6 1610 aa14.35□□□□□ -0.11
NPLOC4-211ENST00000573212 KIF27Q86VH2 1401 aa14.33□□□□□ -0.11
NPLOC4-211ENST00000573212 PTPRGP23470 1445 aa14.32□□□□□ -0.12
NPLOC4-211ENST00000573212 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-211ENST00000573212 CARMIL1Q5VZK9 1371 aa14.3□□□□□ -0.12
NPLOC4-211ENST00000573212 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
NPLOC4-211ENST00000573212 KDM6BO15054 1643 aa14.26□□□□□ -0.13
NPLOC4-211ENST00000573212 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
NPLOC4-211ENST00000573212 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
NPLOC4-211ENST00000573212 CUL7Q14999 1698 aa14.24□□□□□ -0.13
NPLOC4-211ENST00000573212 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
NPLOC4-211ENST00000573212 PLB1Q6P1J6 1458 aa14.23□□□□□ -0.13
NPLOC4-211ENST00000573212 ASXL2Q76L83 1435 aa14.23□□□□□ -0.13
NPLOC4-211ENST00000573212 UHRF1BP1LA0JNW5 1464 aa14.22□□□□□ -0.13
NPLOC4-211ENST00000573212 GLI2P10070 1586 aa14.21□□□□□ -0.14
NPLOC4-211ENST00000573212 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
NPLOC4-211ENST00000573212 COL17A1Q9UMD9 1497 aaPredicted RBP14.18□□□□□ -0.14
NPLOC4-211ENST00000573212 DISP1Q96F81 1524 aa14.18□□□□□ -0.14
NPLOC4-211ENST00000573212 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
NPLOC4-211ENST00000573212 KDM5BQ9UGL1 1544 aa14.16□□□□□ -0.14
NPLOC4-211ENST00000573212 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
NPLOC4-211ENST00000573212 ILDR1Q86SU0 546 aaPredicted RBP14.14□□□□□ -0.15
NPLOC4-211ENST00000573212 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-211ENST00000573212 PPRC1Q5VV67 1664 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-211ENST00000573212 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
NPLOC4-211ENST00000573212 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
NPLOC4-211ENST00000573212 ADGRL1O94910 1474 aa14.1□□□□□ -0.15
NPLOC4-211ENST00000573212 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
NPLOC4-211ENST00000573212 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
NPLOC4-211ENST00000573212 MAP3K4Q9Y6R4 1608 aa14.06□□□□□ -0.16
NPLOC4-211ENST00000573212 KIAA0556O60303 1618 aa14.02□□□□□ -0.16
NPLOC4-211ENST00000573212 ZCCHC11Q5TAX3 1644 aaKnown RBP14.02□□□□□ -0.16
NPLOC4-211ENST00000573212 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.16
NPLOC4-211ENST00000573212 KCNH8Q96L42 1107 aa14.01□□□□□ -0.17
NPLOC4-211ENST00000573212 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
NPLOC4-211ENST00000573212 CD109Q6YHK3 1445 aa14□□□□□ -0.17
NPLOC4-211ENST00000573212 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
NPLOC4-211ENST00000573212 ABCA8O94911 1581 aa13.96□□□□□ -0.17
NPLOC4-211ENST00000573212 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
NPLOC4-211ENST00000573212 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
NPLOC4-211ENST00000573212 HECW2Q9P2P5 1572 aa13.95□□□□□ -0.18
NPLOC4-211ENST00000573212 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
NPLOC4-211ENST00000573212 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.18
NPLOC4-211ENST00000573212 ATP10BO94823 1461 aa13.9□□□□□ -0.18
NPLOC4-211ENST00000573212 CFAP43Q8NDM7 1665 aa13.9□□□□□ -0.18
NPLOC4-211ENST00000573212 PHLDB1Q86UU1 1377 aa13.88□□□□□ -0.19
NPLOC4-211ENST00000573212 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
NPLOC4-211ENST00000573212 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-211ENST00000573212 FAM9AQ8IZU1 332 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-211ENST00000573212 ARID3CA6NKF2 412 aa13.85□□□□□ -0.19
NPLOC4-211ENST00000573212 RAPGEF3O95398 923 aa13.85□□□□□ -0.19
NPLOC4-211ENST00000573212 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
NPLOC4-211ENST00000573212 FBXO41Q8TF61 875 aa13.83□□□□□ -0.2
NPLOC4-211ENST00000573212 PTPRMP28827 1452 aa13.8□□□□□ -0.2
NPLOC4-211ENST00000573212 NEO1Q92859 1461 aa13.79□□□□□ -0.2
NPLOC4-211ENST00000573212 KIF21BO75037 1637 aa13.79□□□□□ -0.2
NPLOC4-211ENST00000573212 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
NPLOC4-211ENST00000573212 ADAMTSL3P82987 1691 aa13.76□□□□□ -0.21
NPLOC4-211ENST00000573212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
NPLOC4-211ENST00000573212 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-211ENST00000573212 SAMD9Q5K651 1589 aa13.74□□□□□ -0.21
NPLOC4-211ENST00000573212 PLEKHD1A6NEE1 506 aa13.73□□□□□ -0.21
NPLOC4-211ENST00000573212 NUP153P49790 1475 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-211ENST00000573212 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-211ENST00000573212 RAPGEF6Q8TEU7 1601 aa13.71□□□□□ -0.22
NPLOC4-211ENST00000573212 FRMPD1Q5SYB0 1578 aa13.71□□□□□ -0.22
NPLOC4-211ENST00000573212 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-211ENST00000573212 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
NPLOC4-211ENST00000573212 AKNAQ7Z591 1439 aa13.7□□□□□ -0.22
NPLOC4-211ENST00000573212 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-211ENST00000573212 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
NPLOC4-211ENST00000573212 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms