RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
ATP2A3-210ENST00000572116 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
ATP2A3-210ENST00000572116 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
ATP2A3-210ENST00000572116 KIF21BO75037 1637 aa19.26■□□□□ 0.67
ATP2A3-210ENST00000572116 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
ATP2A3-210ENST00000572116 IQGAP2Q13576 1575 aa19.23■□□□□ 0.67
ATP2A3-210ENST00000572116 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
ATP2A3-210ENST00000572116 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
ATP2A3-210ENST00000572116 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
ATP2A3-210ENST00000572116 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
ATP2A3-210ENST00000572116 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
ATP2A3-210ENST00000572116 UGGT2Q9NYU1 1516 aa19.08■□□□□ 0.64
ATP2A3-210ENST00000572116 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
ATP2A3-210ENST00000572116 KIAA0556O60303 1618 aa19.05■□□□□ 0.64
ATP2A3-210ENST00000572116 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
ATP2A3-210ENST00000572116 DISP1Q96F81 1524 aa19.01■□□□□ 0.63
ATP2A3-210ENST00000572116 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
ATP2A3-210ENST00000572116 SAMD9Q5K651 1589 aa18.99■□□□□ 0.63
ATP2A3-210ENST00000572116 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
ATP2A3-210ENST00000572116 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
ATP2A3-210ENST00000572116 ADCY10Q96PN6 1610 aa18.91■□□□□ 0.62
ATP2A3-210ENST00000572116 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
ATP2A3-210ENST00000572116 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
ATP2A3-210ENST00000572116 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
ATP2A3-210ENST00000572116 PTPRGP23470 1445 aa18.88■□□□□ 0.61
ATP2A3-210ENST00000572116 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
ATP2A3-210ENST00000572116 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
ATP2A3-210ENST00000572116 ABCA8O94911 1581 aa18.8■□□□□ 0.6
ATP2A3-210ENST00000572116 ABCC2Q92887 1545 aa18.79■□□□□ 0.6
ATP2A3-210ENST00000572116 RAPGEF6Q8TEU7 1601 aa18.79■□□□□ 0.6
ATP2A3-210ENST00000572116 FHOD3Q2V2M9 1422 aa18.79■□□□□ 0.6
ATP2A3-210ENST00000572116 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
ATP2A3-210ENST00000572116 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
ATP2A3-210ENST00000572116 UACAQ9BZF9 1416 aa18.77■□□□□ 0.6
ATP2A3-210ENST00000572116 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.59
ATP2A3-210ENST00000572116 PLB1Q6P1J6 1458 aa18.77■□□□□ 0.59
ATP2A3-210ENST00000572116 KIF13AQ9H1H9 1805 aa18.76■□□□□ 0.59
ATP2A3-210ENST00000572116 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
ATP2A3-210ENST00000572116 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
ATP2A3-210ENST00000572116 CLIP1P30622 1438 aa18.71■□□□□ 0.59
ATP2A3-210ENST00000572116 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
ATP2A3-210ENST00000572116 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
ATP2A3-210ENST00000572116 KDM5BQ9UGL1 1544 aa18.69■□□□□ 0.58
ATP2A3-210ENST00000572116 NPM1P06748 294 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATP2A3-210ENST00000572116 HECW1Q76N89 1606 aa18.67■□□□□ 0.58
ATP2A3-210ENST00000572116 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
ATP2A3-210ENST00000572116 PCF11O94913 1555 aaKnown RBP18.65■□□□□ 0.58
ATP2A3-210ENST00000572116 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
ATP2A3-210ENST00000572116 NUP153P49790 1475 aaKnown RBP18.62■□□□□ 0.57
ATP2A3-210ENST00000572116 DIP2BQ9P265 1576 aa18.61■□□□□ 0.57
ATP2A3-210ENST00000572116 ASXL2Q76L83 1435 aa18.58■□□□□ 0.57
ATP2A3-210ENST00000572116 ATP10BO94823 1461 aa18.58■□□□□ 0.56
ATP2A3-210ENST00000572116 ARID3CA6NKF2 412 aa18.57■□□□□ 0.56
ATP2A3-210ENST00000572116 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
ATP2A3-210ENST00000572116 CDK13Q14004 1512 aaKnown RBP18.55■□□□□ 0.56
ATP2A3-210ENST00000572116 FYCO1Q9BQS8 1478 aa18.55■□□□□ 0.56
ATP2A3-210ENST00000572116 ABCC10Q5T3U5 1492 aa18.54■□□□□ 0.56
ATP2A3-210ENST00000572116 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
ATP2A3-210ENST00000572116 WDR7Q9Y4E6 1490 aa18.53■□□□□ 0.56
ATP2A3-210ENST00000572116 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
ATP2A3-210ENST00000572116 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
ATP2A3-210ENST00000572116 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
ATP2A3-210ENST00000572116 GLI2P10070 1586 aa18.51■□□□□ 0.55
ATP2A3-210ENST00000572116 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
ATP2A3-210ENST00000572116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
ATP2A3-210ENST00000572116 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
ATP2A3-210ENST00000572116 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
ATP2A3-210ENST00000572116 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
ATP2A3-210ENST00000572116 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
ATP2A3-210ENST00000572116 ABCA9Q8IUA7 1624 aa18.45■□□□□ 0.54
ATP2A3-210ENST00000572116 VPS8Q8N3P4 1428 aa18.44■□□□□ 0.54
ATP2A3-210ENST00000572116 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
ATP2A3-210ENST00000572116 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
ATP2A3-210ENST00000572116 KIF14Q15058 1648 aa18.41■□□□□ 0.54
ATP2A3-210ENST00000572116 TTC37Q6PGP7 1564 aa18.39■□□□□ 0.53
ATP2A3-210ENST00000572116 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
ATP2A3-210ENST00000572116 MAGI3Q5TCQ9 1506 aa18.38■□□□□ 0.53
ATP2A3-210ENST00000572116 TIAM1Q13009 1591 aa18.38■□□□□ 0.53
ATP2A3-210ENST00000572116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATP2A3-210ENST00000572116 CDK11AQ9UQ88 783 aaPredicted RBP18.36■□□□□ 0.53
ATP2A3-210ENST00000572116 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
ATP2A3-210ENST00000572116 TROQ12816 1431 aaPredicted RBP18.34■□□□□ 0.53
ATP2A3-210ENST00000572116 CDC42BPBQ9Y5S2 1711 aa18.33■□□□□ 0.52
ATP2A3-210ENST00000572116 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
ATP2A3-210ENST00000572116 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
ATP2A3-210ENST00000572116 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
ATP2A3-210ENST00000572116 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
ATP2A3-210ENST00000572116 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
ATP2A3-210ENST00000572116 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
ATP2A3-210ENST00000572116 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
ATP2A3-210ENST00000572116 KDM6BO15054 1643 aa18.28■□□□□ 0.52
ATP2A3-210ENST00000572116 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.52
ATP2A3-210ENST00000572116 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
ATP2A3-210ENST00000572116 LRRC9Q6ZRR7 1453 aa18.22■□□□□ 0.51
ATP2A3-210ENST00000572116 ARAP3Q8WWN8 1544 aa18.21■□□□□ 0.51
ATP2A3-210ENST00000572116 ARHGAP5Q13017 1502 aa18.19■□□□□ 0.5
ATP2A3-210ENST00000572116 APLP2Q06481 763 aa18.19■□□□□ 0.5
ATP2A3-210ENST00000572116 FANCAO15360 1455 aa18.19■□□□□ 0.5
ATP2A3-210ENST00000572116 NEO1Q92859 1461 aa18.19■□□□□ 0.5
ATP2A3-210ENST00000572116 RICTORQ6R327 1708 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms