RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
ATP2A3-210ENST00000572116 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
ATP2A3-210ENST00000572116 ABCC9O60706 1549 aa23.99■■□□□ 1.43
ATP2A3-210ENST00000572116 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
ATP2A3-210ENST00000572116 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
ATP2A3-210ENST00000572116 NACADO15069 1562 aa23.21■■□□□ 1.31
ATP2A3-210ENST00000572116 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
ATP2A3-210ENST00000572116 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
ATP2A3-210ENST00000572116 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
ATP2A3-210ENST00000572116 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
ATP2A3-210ENST00000572116 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
ATP2A3-210ENST00000572116 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
ATP2A3-210ENST00000572116 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
ATP2A3-210ENST00000572116 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
ATP2A3-210ENST00000572116 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
ATP2A3-210ENST00000572116 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
ATP2A3-210ENST00000572116 DNAJC5BQ9UF47 199 aa21.75■■□□□ 1.07
ATP2A3-210ENST00000572116 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
ATP2A3-210ENST00000572116 CECR2Q9BXF3 1484 aa21.67■■□□□ 1.06
ATP2A3-210ENST00000572116 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
ATP2A3-210ENST00000572116 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
ATP2A3-210ENST00000572116 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
ATP2A3-210ENST00000572116 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
ATP2A3-210ENST00000572116 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.02
ATP2A3-210ENST00000572116 WIZO95785 1651 aa21.38■■□□□ 1.01
ATP2A3-210ENST00000572116 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
ATP2A3-210ENST00000572116 NCAPD3P42695 1498 aa21.32■■□□□ 1
ATP2A3-210ENST00000572116 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
ATP2A3-210ENST00000572116 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-210ENST00000572116 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
ATP2A3-210ENST00000572116 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
ATP2A3-210ENST00000572116 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
ATP2A3-210ENST00000572116 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
ATP2A3-210ENST00000572116 NESP48681 1621 aa20.83■□□□□ 0.93
ATP2A3-210ENST00000572116 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
ATP2A3-210ENST00000572116 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
ATP2A3-210ENST00000572116 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
ATP2A3-210ENST00000572116 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
ATP2A3-210ENST00000572116 CFTRP13569 1480 aa20.65■□□□□ 0.9
ATP2A3-210ENST00000572116 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
ATP2A3-210ENST00000572116 THOC2Q8NI27 1593 aaKnown RBP20.56■□□□□ 0.88
ATP2A3-210ENST00000572116 FANCD2Q9BXW9 1451 aa20.53■□□□□ 0.88
ATP2A3-210ENST00000572116 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
ATP2A3-210ENST00000572116 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
ATP2A3-210ENST00000572116 WDR62O43379 1518 aa20.38■□□□□ 0.85
ATP2A3-210ENST00000572116 CUX2O14529 1486 aa20.37■□□□□ 0.85
ATP2A3-210ENST00000572116 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
ATP2A3-210ENST00000572116 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
ATP2A3-210ENST00000572116 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
ATP2A3-210ENST00000572116 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
ATP2A3-210ENST00000572116 CUX1P39880 1505 aa20.17■□□□□ 0.82
ATP2A3-210ENST00000572116 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
ATP2A3-210ENST00000572116 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
ATP2A3-210ENST00000572116 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
ATP2A3-210ENST00000572116 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
ATP2A3-210ENST00000572116 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
ATP2A3-210ENST00000572116 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
ATP2A3-210ENST00000572116 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
ATP2A3-210ENST00000572116 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
ATP2A3-210ENST00000572116 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
ATP2A3-210ENST00000572116 EIF4G3O43432 1585 aaKnown RBP19.98■□□□□ 0.79
ATP2A3-210ENST00000572116 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
ATP2A3-210ENST00000572116 SOGA1O94964 1423 aa19.94■□□□□ 0.78
ATP2A3-210ENST00000572116 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
ATP2A3-210ENST00000572116 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
ATP2A3-210ENST00000572116 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
ATP2A3-210ENST00000572116 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
ATP2A3-210ENST00000572116 AQRO60306 1485 aaKnown RBP eCLIP19.83■□□□□ 0.762e-6■■■■□ 23.2
ATP2A3-210ENST00000572116 CHD1O14646 1710 aa19.8■□□□□ 0.76
ATP2A3-210ENST00000572116 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
ATP2A3-210ENST00000572116 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
ATP2A3-210ENST00000572116 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
ATP2A3-210ENST00000572116 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
ATP2A3-210ENST00000572116 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
ATP2A3-210ENST00000572116 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
ATP2A3-210ENST00000572116 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
ATP2A3-210ENST00000572116 ADAMTS12P58397 1594 aa19.64■□□□□ 0.73
ATP2A3-210ENST00000572116 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
ATP2A3-210ENST00000572116 CUL7Q14999 1698 aa19.6■□□□□ 0.73
ATP2A3-210ENST00000572116 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
ATP2A3-210ENST00000572116 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
ATP2A3-210ENST00000572116 FBLN2P98095 1184 aa19.53■□□□□ 0.72
ATP2A3-210ENST00000572116 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
ATP2A3-210ENST00000572116 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
ATP2A3-210ENST00000572116 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
ATP2A3-210ENST00000572116 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
ATP2A3-210ENST00000572116 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
ATP2A3-210ENST00000572116 IGF1RP08069 1367 aa19.46■□□□□ 0.71
ATP2A3-210ENST00000572116 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
ATP2A3-210ENST00000572116 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
ATP2A3-210ENST00000572116 CLASP1Q7Z460 1538 aa19.43■□□□□ 0.7
ATP2A3-210ENST00000572116 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
ATP2A3-210ENST00000572116 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
ATP2A3-210ENST00000572116 EEA1Q15075 1411 aa19.36■□□□□ 0.69
ATP2A3-210ENST00000572116 NUP160Q12769 1436 aa19.35■□□□□ 0.69
ATP2A3-210ENST00000572116 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
ATP2A3-210ENST00000572116 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
ATP2A3-210ENST00000572116 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
ATP2A3-210ENST00000572116 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.68
ATP2A3-210ENST00000572116 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms