RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	EEA1	Q15075	1411 aa		42.61	■■■■■ 4.41
ABR-215	ENST00000571945	ERCC6L2	Q5T890	1561 aa		42.61	■■■■■ 4.41
ABR-215	ENST00000571945	CHIC1	Q5VXU3	224 aa		42.58	■■■■■ 4.41
ABR-215	ENST00000571945	PRX	Q9BXM0	1461 aa		42.55	■■■■■ 4.4
ABR-215	ENST00000571945	CYB5RL	Q6IPT4	315 aa		42.55	■■■■■ 4.4
ABR-215	ENST00000571945	JPH4	Q96JJ6	628 aa		42.51	■■■■■ 4.4
ABR-215	ENST00000571945	PRG4	Q92954	1404 aa	Predicted RBP	42.51	■■■■■ 4.4
ABR-215	ENST00000571945	IQGAP2	Q13576	1575 aa		42.49	■■■■■ 4.39
ABR-215	ENST00000571945	CTTNBP2	Q8WZ74	1663 aa		42.43	■■■■■ 4.38
ABR-215	ENST00000571945	CSRNP3	Q8WYN3	585 aa		42.37	■■■■■ 4.37
ABR-215	ENST00000571945	UGGT2	Q9NYU1	1516 aa		42.25	■■■■■ 4.35
ABR-215	ENST00000571945	CARMIL2	Q6F5E8	1435 aa		42.21	■■■■■ 4.35
ABR-215	ENST00000571945	KIF21B	O75037	1637 aa		42.2	■■■■■ 4.35
ABR-215	ENST00000571945	DISP1	Q96F81	1524 aa		42.13	■■■■■ 4.33
ABR-215	ENST00000571945	KIAA0556	O60303	1618 aa		42.1	■■■■■ 4.33
ABR-215	ENST00000571945	FAM9A	Q8IZU1	332 aa	Predicted RBP	42.1	■■■■■ 4.33
ABR-215	ENST00000571945	TNIK	Q9UKE5	1360 aa		42.05	■■■■■ 4.32
ABR-215	ENST00000571945	GOLGA3	Q08378	1498 aa		42.01	■■■■■ 4.32
ABR-215	ENST00000571945	PTPRG	P23470	1445 aa		41.98	■■■■■ 4.31
ABR-215	ENST00000571945	ADCY10	Q96PN6	1610 aa		41.97	■■■■■ 4.31
ABR-215	ENST00000571945	SAMD9	Q5K651	1589 aa		41.84	■■■■■ 4.29
ABR-215	ENST00000571945	UHRF1BP1L	A0JNW5	1464 aa		41.79	■■■■■ 4.28
ABR-215	ENST00000571945	UACA	Q9BZF9	1416 aa		41.76	■■■■■ 4.28
ABR-215	ENST00000571945	ABCC2	Q92887	1545 aa		41.75	■■■■■ 4.27
ABR-215	ENST00000571945	MAPKBP1	O60336	1514 aa		41.74	■■■■■ 4.27
ABR-215	ENST00000571945	TTBK1	Q5TCY1	1321 aa	Predicted RBP	41.71	■■■■■ 4.27
ABR-215	ENST00000571945	TRH	P20396	242 aa	Predicted RBP	41.68	■■■■■ 4.26
ABR-215	ENST00000571945	NPM1	P06748	294 aa	Known RBP eCLIP	41.67	■■■■■ 4.26
ABR-215	ENST00000571945	EFCAB5	A4FU69	1503 aa		41.66	■■■■■ 4.26
ABR-215	ENST00000571945	ABCA8	O94911	1581 aa		41.62	■■■■■ 4.25
ABR-215	ENST00000571945	UBTF	P17480	764 aa	Known RBP	41.57	■■■■■ 4.25
ABR-215	ENST00000571945	PLB1	Q6P1J6	1458 aa		41.57	■■■■■ 4.25
ABR-215	ENST00000571945	KDM5B	Q9UGL1	1544 aa		41.57	■■■■■ 4.25
ABR-215	ENST00000571945	KIF13A	Q9H1H9	1805 aa		41.55	■■■■■ 4.24
ABR-215	ENST00000571945	ZCCHC11	Q5TAX3	1644 aa	Known RBP	41.51	■■■■■ 4.24
ABR-215	ENST00000571945	EHMT2	Q96KQ7	1210 aa		41.48	■■■■■ 4.23
ABR-215	ENST00000571945	DIP2B	Q9P265	1576 aa		41.48	■■■■■ 4.23
ABR-215	ENST00000571945	ABCC10	Q5T3U5	1492 aa		41.47	■■■■■ 4.23
ABR-215	ENST00000571945	P3H3	Q8IVL6	736 aa		41.47	■■■■■ 4.23
ABR-215	ENST00000571945	FHOD3	Q2V2M9	1422 aa		41.44	■■■■■ 4.23
ABR-215	ENST00000571945	RAPGEF6	Q8TEU7	1601 aa		41.41	■■■■■ 4.22
ABR-215	ENST00000571945	RANGAP1	P46060	587 aa	Predicted RBP	41.41	■■■■■ 4.22
ABR-215	ENST00000571945	ASXL2	Q76L83	1435 aa		41.39	■■■■■ 4.22
ABR-215	ENST00000571945	ARHGAP35	Q9NRY4	1499 aa		41.34	■■■■■ 4.21
ABR-215	ENST00000571945	GLI2	P10070	1586 aa		41.25	■■■■■ 4.19
ABR-215	ENST00000571945	FAM69C	Q0P6D2	419 aa		41.24	■■■■■ 4.19
ABR-215	ENST00000571945	WDR7	Q9Y4E6	1490 aa		41.23	■■■■■ 4.19
ABR-215	ENST00000571945	NUP153	P49790	1475 aa	Known RBP	41.2	■■■■■ 4.19
ABR-215	ENST00000571945	FMN1	Q68DA7	1419 aa		41.19	■■■■■ 4.18
ABR-215	ENST00000571945	ATP10B	O94823	1461 aa		41.18	■■■■■ 4.18
ABR-215	ENST00000571945	EPRS	P07814	1512 aa	Known RBP	41.18	■■■■■ 4.18
ABR-215	ENST00000571945	HECW1	Q76N89	1606 aa		41.07	■■■■■ 4.17
ABR-215	ENST00000571945	MAP3K4	Q9Y6R4	1608 aa		41.07	■■■■■ 4.17
ABR-215	ENST00000571945	TSPOAP1	O95153	1857 aa		41.07	■■■■■ 4.16
ABR-215	ENST00000571945	CLIP1	P30622	1438 aa		41.06	■■■■■ 4.16
ABR-215	ENST00000571945	PPRC1	Q5VV67	1664 aa	Known RBP	41	■■■■■ 4.15
ABR-215	ENST00000571945	ARID3C	A6NKF2	412 aa		40.99	■■■■■ 4.15
ABR-215	ENST00000571945	CFAP43	Q8NDM7	1665 aa		40.98	■■■■■ 4.15
ABR-215	ENST00000571945	PCF11	O94913	1555 aa	Known RBP	40.91	■■■■■ 4.14
ABR-215	ENST00000571945	CEP162	Q5TB80	1403 aa		40.89	■■■■■ 4.14
ABR-215	ENST00000571945	CDK13	Q14004	1512 aa	Known RBP	40.88	■■■■■ 4.14
ABR-215	ENST00000571945	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	40.87	■■■■■ 4.13
ABR-215	ENST00000571945	HNRNPUL2	Q1KMD3	747 aa	Known RBP	40.87	■■■■■ 4.13
ABR-215	ENST00000571945	ABCA9	Q8IUA7	1624 aa		40.86	■■■■■ 4.13
ABR-215	ENST00000571945	CASKIN1	Q8WXD9	1431 aa		40.85	■■■■■ 4.13
ABR-215	ENST00000571945	TEX14	Q8IWB6	1497 aa		40.85	■■■■■ 4.13
ABR-215	ENST00000571945	LRRIQ1	Q96JM4	1722 aa		40.84	■■■■■ 4.13
ABR-215	ENST00000571945	FYCO1	Q9BQS8	1478 aa		40.82	■■■■■ 4.12
ABR-215	ENST00000571945	KCNH8	Q96L42	1107 aa		40.81	■■■■■ 4.12
ABR-215	ENST00000571945	KDM6B	O15054	1643 aa		40.79	■■■■■ 4.12
ABR-215	ENST00000571945	MAGI3	Q5TCQ9	1506 aa		40.79	■■■■■ 4.12
ABR-215	ENST00000571945	CD109	Q6YHK3	1445 aa		40.78	■■■■■ 4.12
ABR-215	ENST00000571945	CCDC18	Q5T9S5	1454 aa		40.77	■■■■■ 4.12
ABR-215	ENST00000571945	PLEKHD1	A6NEE1	506 aa		40.75	■■■■■ 4.11
ABR-215	ENST00000571945	LOC105371045	A0A1W2PR82	267 aa		40.73	■■■■■ 4.11
ABR-215	ENST00000571945	ATP1B4	Q9UN42	357 aa	Predicted RBP	40.72	■■■■■ 4.11
ABR-215	ENST00000571945	CDK11A	Q9UQ88	783 aa	Predicted RBP	40.63	■■■■■ 4.09
ABR-215	ENST00000571945	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	40.62	■■■■■ 4.09
ABR-215	ENST00000571945	TTC37	Q6PGP7	1564 aa		40.6	■■■■■ 4.09
ABR-215	ENST00000571945	TRO	Q12816	1431 aa	Predicted RBP	40.59	■■■■■ 4.09
ABR-215	ENST00000571945	KIF14	Q15058	1648 aa		40.57	■■■■■ 4.09
ABR-215	ENST00000571945	NEO1	Q92859	1461 aa		40.49	■■■■■ 4.07
ABR-215	ENST00000571945	CFAP74	Q9C0B2	1584 aa		40.48	■■■■■ 4.07
ABR-215	ENST00000571945	PHLDB1	Q86UU1	1377 aa		40.48	■■■■■ 4.07
ABR-215	ENST00000571945	COL17A1	Q9UMD9	1497 aa	Predicted RBP	40.47	■■■■■ 4.07
ABR-215	ENST00000571945	MYO5C	Q9NQX4	1742 aa		40.45	■■■■■ 4.07
ABR-215	ENST00000571945	ARAP3	Q8WWN8	1544 aa		40.44	■■■■■ 4.06
ABR-215	ENST00000571945	VPS8	Q8N3P4	1428 aa		40.43	■■■■■ 4.06
ABR-215	ENST00000571945	FANCA	O15360	1455 aa		40.36	■■■■■ 4.05
ABR-215	ENST00000571945	PLCH2	O75038	1416 aa		40.34	■■■■■ 4.05
ABR-215	ENST00000571945	PREX2	Q70Z35	1606 aa		40.27	■■■■■ 4.04
ABR-215	ENST00000571945	EHBP1L1	Q8N3D4	1523 aa		40.27	■■■■■ 4.04
ABR-215	ENST00000571945	AKNA	Q7Z591	1439 aa		40.25	■■■■■ 4.03
ABR-215	ENST00000571945	TIAM1	Q13009	1591 aa		40.24	■■■■■ 4.03
ABR-215	ENST00000571945	MTUS2	Q5JR59	1369 aa		40.23	■■■■■ 4.03
ABR-215	ENST00000571945	CDC42BPA	Q5VT25	1732 aa		40.22	■■■■■ 4.03
ABR-215	ENST00000571945	CDC42BPB	Q9Y5S2	1711 aa		40.22	■■■■■ 4.03
ABR-215	ENST00000571945	FRMPD1	Q5SYB0	1578 aa		40.21	■■■■■ 4.03
ABR-215	ENST00000571945	ARHGAP5	Q13017	1502 aa		40.19	■■■■■ 4.02
ABR-215	ENST00000571945	RICTOR	Q6R327	1708 aa		40.19	■■■■■ 4.02

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms