RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
RAB40B-204ENST00000571554 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
RAB40B-204ENST00000571554 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
RAB40B-204ENST00000571554 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
RAB40B-204ENST00000571554 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
RAB40B-204ENST00000571554 IQGAP2Q13576 1575 aa23.49■■□□□ 1.35
RAB40B-204ENST00000571554 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
RAB40B-204ENST00000571554 ADCY10Q96PN6 1610 aa23.48■■□□□ 1.35
RAB40B-204ENST00000571554 KIF13AQ9H1H9 1805 aa23.43■■□□□ 1.34
RAB40B-204ENST00000571554 NPM1P06748 294 aaKnown RBP eCLIP23.4■■□□□ 1.34
RAB40B-204ENST00000571554 PTPRGP23470 1445 aa23.4■■□□□ 1.34
RAB40B-204ENST00000571554 CARMIL2Q6F5E8 1435 aa23.4■■□□□ 1.34
RAB40B-204ENST00000571554 DISP1Q96F81 1524 aa23.36■■□□□ 1.33
RAB40B-204ENST00000571554 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
RAB40B-204ENST00000571554 MAPKBP1O60336 1514 aa23.33■■□□□ 1.33
RAB40B-204ENST00000571554 CTTNBP2Q8WZ74 1663 aa23.33■■□□□ 1.33
RAB40B-204ENST00000571554 UGGT2Q9NYU1 1516 aa23.32■■□□□ 1.32
RAB40B-204ENST00000571554 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
RAB40B-204ENST00000571554 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
RAB40B-204ENST00000571554 DIP2BQ9P265 1576 aa23.29■■□□□ 1.32
RAB40B-204ENST00000571554 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
RAB40B-204ENST00000571554 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
RAB40B-204ENST00000571554 ABCC2Q92887 1545 aa23.23■■□□□ 1.31
RAB40B-204ENST00000571554 UACAQ9BZF9 1416 aa23.22■■□□□ 1.31
RAB40B-204ENST00000571554 TSPOAP1O95153 1857 aa23.19■■□□□ 1.3
RAB40B-204ENST00000571554 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
RAB40B-204ENST00000571554 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
RAB40B-204ENST00000571554 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
RAB40B-204ENST00000571554 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
RAB40B-204ENST00000571554 GOLGA3Q08378 1498 aa23.13■■□□□ 1.29
RAB40B-204ENST00000571554 ZCCHC11Q5TAX3 1644 aaKnown RBP23.13■■□□□ 1.29
RAB40B-204ENST00000571554 PLB1Q6P1J6 1458 aa23.12■■□□□ 1.29
RAB40B-204ENST00000571554 KDM5BQ9UGL1 1544 aa23.1■■□□□ 1.29
RAB40B-204ENST00000571554 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
RAB40B-204ENST00000571554 EEA1Q15075 1411 aa23.08■■□□□ 1.28
RAB40B-204ENST00000571554 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
RAB40B-204ENST00000571554 ABCA8O94911 1581 aa23.04■■□□□ 1.28
RAB40B-204ENST00000571554 KDM6BO15054 1643 aa23.03■■□□□ 1.28
RAB40B-204ENST00000571554 GLI2P10070 1586 aa23.01■■□□□ 1.27
RAB40B-204ENST00000571554 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
RAB40B-204ENST00000571554 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
RAB40B-204ENST00000571554 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
RAB40B-204ENST00000571554 ARID3CA6NKF2 412 aa22.99■■□□□ 1.27
RAB40B-204ENST00000571554 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
RAB40B-204ENST00000571554 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
RAB40B-204ENST00000571554 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
RAB40B-204ENST00000571554 WDR7Q9Y4E6 1490 aa22.96■■□□□ 1.27
RAB40B-204ENST00000571554 KIF21BO75037 1637 aa22.94■■□□□ 1.26
RAB40B-204ENST00000571554 MAP3K4Q9Y6R4 1608 aa22.94■■□□□ 1.26
RAB40B-204ENST00000571554 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
RAB40B-204ENST00000571554 FHOD3Q2V2M9 1422 aa22.89■■□□□ 1.25
RAB40B-204ENST00000571554 RAPGEF6Q8TEU7 1601 aa22.86■■□□□ 1.25
RAB40B-204ENST00000571554 ATP10BO94823 1461 aa22.85■■□□□ 1.25
RAB40B-204ENST00000571554 TEX14Q8IWB6 1497 aa22.82■■□□□ 1.24
RAB40B-204ENST00000571554 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
RAB40B-204ENST00000571554 CFAP43Q8NDM7 1665 aa22.81■■□□□ 1.24
RAB40B-204ENST00000571554 UBTFP17480 764 aaKnown RBP22.8■■□□□ 1.24
RAB40B-204ENST00000571554 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
RAB40B-204ENST00000571554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.78■■□□□ 1.24
RAB40B-204ENST00000571554 HNRNPUL2Q1KMD3 747 aaKnown RBP22.78■■□□□ 1.24
RAB40B-204ENST00000571554 NUP153P49790 1475 aaKnown RBP22.77■■□□□ 1.24
RAB40B-204ENST00000571554 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
RAB40B-204ENST00000571554 MAGI3Q5TCQ9 1506 aa22.72■■□□□ 1.23
RAB40B-204ENST00000571554 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
RAB40B-204ENST00000571554 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
RAB40B-204ENST00000571554 ARHGAP35Q9NRY4 1499 aa22.65■■□□□ 1.22
RAB40B-204ENST00000571554 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
RAB40B-204ENST00000571554 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
RAB40B-204ENST00000571554 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
RAB40B-204ENST00000571554 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
RAB40B-204ENST00000571554 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
RAB40B-204ENST00000571554 HECW1Q76N89 1606 aa22.54■■□□□ 1.2
RAB40B-204ENST00000571554 ARAP3Q8WWN8 1544 aa22.54■■□□□ 1.2
RAB40B-204ENST00000571554 TTC37Q6PGP7 1564 aa22.53■■□□□ 1.2
RAB40B-204ENST00000571554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.52■■□□□ 1.2
RAB40B-204ENST00000571554 NEO1Q92859 1461 aa22.5■■□□□ 1.19
RAB40B-204ENST00000571554 RAPGEF3O95398 923 aa22.5■■□□□ 1.19
RAB40B-204ENST00000571554 LRRIQ1Q96JM4 1722 aa22.48■■□□□ 1.19
RAB40B-204ENST00000571554 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
RAB40B-204ENST00000571554 FRMPD1Q5SYB0 1578 aa22.46■■□□□ 1.19
RAB40B-204ENST00000571554 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
RAB40B-204ENST00000571554 FANCAO15360 1455 aa22.43■■□□□ 1.18
RAB40B-204ENST00000571554 KIF14Q15058 1648 aa22.42■■□□□ 1.18
RAB40B-204ENST00000571554 CFAP74Q9C0B2 1584 aa22.41■■□□□ 1.18
RAB40B-204ENST00000571554 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
RAB40B-204ENST00000571554 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
RAB40B-204ENST00000571554 DENND4BO75064 1496 aaPredicted RBP22.37■■□□□ 1.17
RAB40B-204ENST00000571554 CDK11AQ9UQ88 783 aaPredicted RBP22.37■■□□□ 1.17
RAB40B-204ENST00000571554 CLIP1P30622 1438 aa22.37■■□□□ 1.17
RAB40B-204ENST00000571554 MYO5CQ9NQX4 1742 aa22.35■■□□□ 1.17
RAB40B-204ENST00000571554 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
RAB40B-204ENST00000571554 CASKIN1Q8WXD9 1431 aa22.35■■□□□ 1.17
RAB40B-204ENST00000571554 PLCH2O75038 1416 aa22.34■■□□□ 1.17
RAB40B-204ENST00000571554 ARHGEF40Q8TER5 1519 aa22.3■■□□□ 1.16
RAB40B-204ENST00000571554 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
RAB40B-204ENST00000571554 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
RAB40B-204ENST00000571554 SCAPERQ9BY12 1400 aa22.28■■□□□ 1.16
RAB40B-204ENST00000571554 ARID4BQ4LE39 1312 aaPredicted RBP22.28■■□□□ 1.16
RAB40B-204ENST00000571554 ARHGAP5Q13017 1502 aa22.26■■□□□ 1.15
RAB40B-204ENST00000571554 YEATS2Q9ULM3 1422 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms