RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 UBTFP17480 764 aaKnown RBP18.7■□□□□ 0.58
CALCOCO2-225ENST00000570513 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
CALCOCO2-225ENST00000570513 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
CALCOCO2-225ENST00000570513 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
CALCOCO2-225ENST00000570513 FBLN2P98095 1184 aa18.68■□□□□ 0.58
CALCOCO2-225ENST00000570513 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
CALCOCO2-225ENST00000570513 MSH5O43196 834 aa18.66■□□□□ 0.58
CALCOCO2-225ENST00000570513 NUP160Q12769 1436 aa18.66■□□□□ 0.58
CALCOCO2-225ENST00000570513 CEP162Q5TB80 1403 aa18.61■□□□□ 0.57
CALCOCO2-225ENST00000570513 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
CALCOCO2-225ENST00000570513 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
CALCOCO2-225ENST00000570513 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
CALCOCO2-225ENST00000570513 CLIP1P30622 1438 aa18.54■□□□□ 0.56
CALCOCO2-225ENST00000570513 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
CALCOCO2-225ENST00000570513 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
CALCOCO2-225ENST00000570513 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.56
CALCOCO2-225ENST00000570513 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
CALCOCO2-225ENST00000570513 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
CALCOCO2-225ENST00000570513 SAMD9Q5K651 1589 aa18.49■□□□□ 0.55
CALCOCO2-225ENST00000570513 ARHGAP35Q9NRY4 1499 aa18.48■□□□□ 0.55
CALCOCO2-225ENST00000570513 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
CALCOCO2-225ENST00000570513 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
CALCOCO2-225ENST00000570513 ADRA2BP18089 450 aa18.44■□□□□ 0.54
CALCOCO2-225ENST00000570513 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
CALCOCO2-225ENST00000570513 DISP1Q96F81 1524 aa18.42■□□□□ 0.54
CALCOCO2-225ENST00000570513 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
CALCOCO2-225ENST00000570513 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
CALCOCO2-225ENST00000570513 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
CALCOCO2-225ENST00000570513 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
CALCOCO2-225ENST00000570513 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
CALCOCO2-225ENST00000570513 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
CALCOCO2-225ENST00000570513 P3H3Q8IVL6 736 aa18.35■□□□□ 0.53
CALCOCO2-225ENST00000570513 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.53
CALCOCO2-225ENST00000570513 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
CALCOCO2-225ENST00000570513 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
CALCOCO2-225ENST00000570513 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
CALCOCO2-225ENST00000570513 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
CALCOCO2-225ENST00000570513 ARHGEF11O15085 1522 aa18.21■□□□□ 0.51
CALCOCO2-225ENST00000570513 CASKIN1Q8WXD9 1431 aa18.21■□□□□ 0.51
CALCOCO2-225ENST00000570513 PTPRGP23470 1445 aa18.19■□□□□ 0.5
CALCOCO2-225ENST00000570513 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
CALCOCO2-225ENST00000570513 ABCA8O94911 1581 aa18.18■□□□□ 0.5
CALCOCO2-225ENST00000570513 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
CALCOCO2-225ENST00000570513 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
CALCOCO2-225ENST00000570513 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
CALCOCO2-225ENST00000570513 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
CALCOCO2-225ENST00000570513 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
CALCOCO2-225ENST00000570513 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
CALCOCO2-225ENST00000570513 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
CALCOCO2-225ENST00000570513 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
CALCOCO2-225ENST00000570513 LRRIQ1Q96JM4 1722 aa18.12■□□□□ 0.49
CALCOCO2-225ENST00000570513 UACAQ9BZF9 1416 aa18.11■□□□□ 0.49
CALCOCO2-225ENST00000570513 ABCC2Q92887 1545 aa18.11■□□□□ 0.49
CALCOCO2-225ENST00000570513 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
CALCOCO2-225ENST00000570513 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
CALCOCO2-225ENST00000570513 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
CALCOCO2-225ENST00000570513 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
CALCOCO2-225ENST00000570513 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.49
CALCOCO2-225ENST00000570513 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
CALCOCO2-225ENST00000570513 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
CALCOCO2-225ENST00000570513 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
CALCOCO2-225ENST00000570513 ARID3CA6NKF2 412 aa18.05■□□□□ 0.48
CALCOCO2-225ENST00000570513 APLP2Q06481 763 aa18.03■□□□□ 0.48
CALCOCO2-225ENST00000570513 ATP10BO94823 1461 aa18■□□□□ 0.47
CALCOCO2-225ENST00000570513 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
CALCOCO2-225ENST00000570513 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
CALCOCO2-225ENST00000570513 LRRC9Q6ZRR7 1453 aa17.99■□□□□ 0.47
CALCOCO2-225ENST00000570513 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
CALCOCO2-225ENST00000570513 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
CALCOCO2-225ENST00000570513 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
CALCOCO2-225ENST00000570513 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
CALCOCO2-225ENST00000570513 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
CALCOCO2-225ENST00000570513 CYB5RLQ6IPT4 315 aa17.93■□□□□ 0.46
CALCOCO2-225ENST00000570513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO2-225ENST00000570513 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
CALCOCO2-225ENST00000570513 TROQ12816 1431 aaPredicted RBP17.9■□□□□ 0.46
CALCOCO2-225ENST00000570513 KIF14Q15058 1648 aa17.87■□□□□ 0.45
CALCOCO2-225ENST00000570513 SUPT6HQ7KZ85 1726 aaKnown RBP17.87■□□□□ 0.45
CALCOCO2-225ENST00000570513 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
CALCOCO2-225ENST00000570513 CDK11AQ9UQ88 783 aaPredicted RBP17.86■□□□□ 0.45
CALCOCO2-225ENST00000570513 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
CALCOCO2-225ENST00000570513 WDR7Q9Y4E6 1490 aa17.84■□□□□ 0.45
CALCOCO2-225ENST00000570513 ASXL2Q76L83 1435 aa17.83■□□□□ 0.45
CALCOCO2-225ENST00000570513 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
CALCOCO2-225ENST00000570513 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
CALCOCO2-225ENST00000570513 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
CALCOCO2-225ENST00000570513 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
CALCOCO2-225ENST00000570513 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
CALCOCO2-225ENST00000570513 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
CALCOCO2-225ENST00000570513 MYOM3Q5VTT5 1437 aa17.75■□□□□ 0.43
CALCOCO2-225ENST00000570513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.75■□□□□ 0.43
CALCOCO2-225ENST00000570513 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
CALCOCO2-225ENST00000570513 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
CALCOCO2-225ENST00000570513 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
CALCOCO2-225ENST00000570513 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
CALCOCO2-225ENST00000570513 KCNH8Q96L42 1107 aa17.71■□□□□ 0.43
CALCOCO2-225ENST00000570513 PREX2Q70Z35 1606 aa17.71■□□□□ 0.43
CALCOCO2-225ENST00000570513 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
CALCOCO2-225ENST00000570513 CDC42BPAQ5VT25 1732 aa17.7■□□□□ 0.42
CALCOCO2-225ENST00000570513 GPATCH8Q9UKJ3 1502 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms