RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
CALCOCO2-225ENST00000570513 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
CALCOCO2-225ENST00000570513 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
CALCOCO2-225ENST00000570513 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
CALCOCO2-225ENST00000570513 ABCC9O60706 1549 aa22.81■■□□□ 1.24
CALCOCO2-225ENST00000570513 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
CALCOCO2-225ENST00000570513 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
CALCOCO2-225ENST00000570513 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
CALCOCO2-225ENST00000570513 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
CALCOCO2-225ENST00000570513 NACADO15069 1562 aa22.24■■□□□ 1.15
CALCOCO2-225ENST00000570513 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
CALCOCO2-225ENST00000570513 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
CALCOCO2-225ENST00000570513 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
CALCOCO2-225ENST00000570513 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
CALCOCO2-225ENST00000570513 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
CALCOCO2-225ENST00000570513 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
CALCOCO2-225ENST00000570513 PABPN1Q86U42 306 aaKnown RBP eCLIP21.36■■□□□ 1.01
CALCOCO2-225ENST00000570513 CECR2Q9BXF3 1484 aa21.04■□□□□ 0.96
CALCOCO2-225ENST00000570513 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
CALCOCO2-225ENST00000570513 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
CALCOCO2-225ENST00000570513 SMARCA4P51532 1647 aa20.91■□□□□ 0.94
CALCOCO2-225ENST00000570513 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
CALCOCO2-225ENST00000570513 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
CALCOCO2-225ENST00000570513 RSF1Q96T23 1441 aaPredicted RBP20.82■□□□□ 0.92
CALCOCO2-225ENST00000570513 WIZO95785 1651 aa20.69■□□□□ 0.9
CALCOCO2-225ENST00000570513 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
CALCOCO2-225ENST00000570513 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
CALCOCO2-225ENST00000570513 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.9
CALCOCO2-225ENST00000570513 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
CALCOCO2-225ENST00000570513 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
CALCOCO2-225ENST00000570513 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
CALCOCO2-225ENST00000570513 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
CALCOCO2-225ENST00000570513 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
CALCOCO2-225ENST00000570513 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
CALCOCO2-225ENST00000570513 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CALCOCO2-225ENST00000570513 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
CALCOCO2-225ENST00000570513 CFTRP13569 1480 aa19.95■□□□□ 0.78
CALCOCO2-225ENST00000570513 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
CALCOCO2-225ENST00000570513 NESP48681 1621 aa19.91■□□□□ 0.78
CALCOCO2-225ENST00000570513 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
CALCOCO2-225ENST00000570513 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
CALCOCO2-225ENST00000570513 FOXD1Q16676 465 aa19.86■□□□□ 0.77
CALCOCO2-225ENST00000570513 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
CALCOCO2-225ENST00000570513 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
CALCOCO2-225ENST00000570513 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
CALCOCO2-225ENST00000570513 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
CALCOCO2-225ENST00000570513 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
CALCOCO2-225ENST00000570513 WRNQ14191 1432 aaPredicted RBP eCLIP19.62■□□□□ 0.73
CALCOCO2-225ENST00000570513 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
CALCOCO2-225ENST00000570513 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
CALCOCO2-225ENST00000570513 CUX1P39880 1505 aa19.58■□□□□ 0.73
CALCOCO2-225ENST00000570513 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
CALCOCO2-225ENST00000570513 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
CALCOCO2-225ENST00000570513 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
CALCOCO2-225ENST00000570513 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
CALCOCO2-225ENST00000570513 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
CALCOCO2-225ENST00000570513 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
CALCOCO2-225ENST00000570513 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
CALCOCO2-225ENST00000570513 WDR62O43379 1518 aa19.47■□□□□ 0.71
CALCOCO2-225ENST00000570513 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
CALCOCO2-225ENST00000570513 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
CALCOCO2-225ENST00000570513 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
CALCOCO2-225ENST00000570513 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
CALCOCO2-225ENST00000570513 CUX2O14529 1486 aa19.28■□□□□ 0.68
CALCOCO2-225ENST00000570513 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
CALCOCO2-225ENST00000570513 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
CALCOCO2-225ENST00000570513 SOGA1O94964 1423 aa19.25■□□□□ 0.67
CALCOCO2-225ENST00000570513 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
CALCOCO2-225ENST00000570513 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
CALCOCO2-225ENST00000570513 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
CALCOCO2-225ENST00000570513 KIF27Q86VH2 1401 aa19.16■□□□□ 0.66
CALCOCO2-225ENST00000570513 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
CALCOCO2-225ENST00000570513 EEA1Q15075 1411 aa19.14■□□□□ 0.65
CALCOCO2-225ENST00000570513 ZNF608Q9ULD9 1512 aaPredicted RBP19.12■□□□□ 0.65
CALCOCO2-225ENST00000570513 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
CALCOCO2-225ENST00000570513 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
CALCOCO2-225ENST00000570513 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
CALCOCO2-225ENST00000570513 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
CALCOCO2-225ENST00000570513 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.646e-13■■■■□ 26.1
CALCOCO2-225ENST00000570513 PBRM1Q86U86 1689 aa19.04■□□□□ 0.64
CALCOCO2-225ENST00000570513 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
CALCOCO2-225ENST00000570513 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
CALCOCO2-225ENST00000570513 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
CALCOCO2-225ENST00000570513 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
CALCOCO2-225ENST00000570513 IGF1RP08069 1367 aa18.97■□□□□ 0.63
CALCOCO2-225ENST00000570513 CUL7Q14999 1698 aa18.96■□□□□ 0.63
CALCOCO2-225ENST00000570513 KIF21BO75037 1637 aa18.96■□□□□ 0.63
CALCOCO2-225ENST00000570513 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
CALCOCO2-225ENST00000570513 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
CALCOCO2-225ENST00000570513 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
CALCOCO2-225ENST00000570513 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
CALCOCO2-225ENST00000570513 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
CALCOCO2-225ENST00000570513 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
CALCOCO2-225ENST00000570513 RAPGEF2Q9Y4G8 1499 aa18.88■□□□□ 0.61
CALCOCO2-225ENST00000570513 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
CALCOCO2-225ENST00000570513 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
CALCOCO2-225ENST00000570513 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
CALCOCO2-225ENST00000570513 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
CALCOCO2-225ENST00000570513 GRIN2AQ12879 1464 aa18.77■□□□□ 0.59
CALCOCO2-225ENST00000570513 CHD1O14646 1710 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms