RNA–Protein interactions for RNA: ENST00000570215.1

KARS-212, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-212ENST00000570215 SHROOM2Q13796 1616 aa25.29■■□□□ 1.64
KARS-212ENST00000570215 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
KARS-212ENST00000570215 CUL7Q14999 1698 aa25.23■■□□□ 1.63
KARS-212ENST00000570215 JPH4Q96JJ6 628 aa25.22■■□□□ 1.63
KARS-212ENST00000570215 CARMIL1Q5VZK9 1371 aa25.21■■□□□ 1.63
KARS-212ENST00000570215 PRG4Q92954 1404 aaPredicted RBP25.2■■□□□ 1.63
KARS-212ENST00000570215 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
KARS-212ENST00000570215 KIAA0586Q9BVV6 1533 aa25.12■■□□□ 1.61
KARS-212ENST00000570215 RAPGEF2Q9Y4G8 1499 aa25■■□□□ 1.59
KARS-212ENST00000570215 IQGAP2Q13576 1575 aa24.94■■□□□ 1.58
KARS-212ENST00000570215 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
KARS-212ENST00000570215 ADCY10Q96PN6 1610 aa24.87■■□□□ 1.57
KARS-212ENST00000570215 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
KARS-212ENST00000570215 DISP1Q96F81 1524 aa24.85■■□□□ 1.57
KARS-212ENST00000570215 PTPRGP23470 1445 aa24.84■■□□□ 1.57
KARS-212ENST00000570215 CARMIL2Q6F5E8 1435 aa24.82■■□□□ 1.56
KARS-212ENST00000570215 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
KARS-212ENST00000570215 UGGT2Q9NYU1 1516 aa24.8■■□□□ 1.56
KARS-212ENST00000570215 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
KARS-212ENST00000570215 CTTNBP2Q8WZ74 1663 aa24.78■■□□□ 1.56
KARS-212ENST00000570215 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
KARS-212ENST00000570215 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
KARS-212ENST00000570215 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
KARS-212ENST00000570215 KIAA0556O60303 1618 aa24.72■■□□□ 1.55
KARS-212ENST00000570215 MAPKBP1O60336 1514 aa24.69■■□□□ 1.54
KARS-212ENST00000570215 FAM69CQ0P6D2 419 aa24.66■■□□□ 1.54
KARS-212ENST00000570215 ABCC10Q5T3U5 1492 aa24.65■■□□□ 1.54
KARS-212ENST00000570215 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
KARS-212ENST00000570215 ABCC2Q92887 1545 aa24.64■■□□□ 1.53
KARS-212ENST00000570215 DIP2BQ9P265 1576 aa24.63■■□□□ 1.53
KARS-212ENST00000570215 EEA1Q15075 1411 aa24.62■■□□□ 1.53
KARS-212ENST00000570215 UHRF1BP1LA0JNW5 1464 aa24.62■■□□□ 1.53
KARS-212ENST00000570215 P3H3Q8IVL6 736 aa24.6■■□□□ 1.53
KARS-212ENST00000570215 PLB1Q6P1J6 1458 aa24.58■■□□□ 1.52
KARS-212ENST00000570215 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
KARS-212ENST00000570215 ASXL2Q76L83 1435 aa24.55■■□□□ 1.52
KARS-212ENST00000570215 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
KARS-212ENST00000570215 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
KARS-212ENST00000570215 KDM5BQ9UGL1 1544 aa24.53■■□□□ 1.52
KARS-212ENST00000570215 ZCCHC11Q5TAX3 1644 aaKnown RBP24.51■■□□□ 1.51
KARS-212ENST00000570215 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
KARS-212ENST00000570215 ABCA8O94911 1581 aa24.48■■□□□ 1.51
KARS-212ENST00000570215 KIF21BO75037 1637 aa24.47■■□□□ 1.51
KARS-212ENST00000570215 SAMD9Q5K651 1589 aa24.46■■□□□ 1.51
KARS-212ENST00000570215 ARID3CA6NKF2 412 aa24.43■■□□□ 1.5
KARS-212ENST00000570215 EPRSP07814 1512 aaKnown RBP24.4■■□□□ 1.5
KARS-212ENST00000570215 GLI2P10070 1586 aa24.38■■□□□ 1.49
KARS-212ENST00000570215 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
KARS-212ENST00000570215 PPRC1Q5VV67 1664 aaKnown RBP24.36■■□□□ 1.49
KARS-212ENST00000570215 WDR7Q9Y4E6 1490 aa24.34■■□□□ 1.49
KARS-212ENST00000570215 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
KARS-212ENST00000570215 KCNH8Q96L42 1107 aa24.33■■□□□ 1.49
KARS-212ENST00000570215 ATP10BO94823 1461 aa24.32■■□□□ 1.48
KARS-212ENST00000570215 MAP3K4Q9Y6R4 1608 aa24.3■■□□□ 1.48
KARS-212ENST00000570215 KDM6BO15054 1643 aa24.29■■□□□ 1.48
KARS-212ENST00000570215 RAPGEF6Q8TEU7 1601 aa24.28■■□□□ 1.48
KARS-212ENST00000570215 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
KARS-212ENST00000570215 EFCAB5A4FU69 1503 aa24.22■■□□□ 1.47
KARS-212ENST00000570215 COL17A1Q9UMD9 1497 aaPredicted RBP24.21■■□□□ 1.47
KARS-212ENST00000570215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.19■■□□□ 1.46
KARS-212ENST00000570215 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
KARS-212ENST00000570215 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
KARS-212ENST00000570215 CD109Q6YHK3 1445 aa24.17■■□□□ 1.46
KARS-212ENST00000570215 CFAP43Q8NDM7 1665 aa24.14■■□□□ 1.45
KARS-212ENST00000570215 TEX14Q8IWB6 1497 aa24.12■■□□□ 1.45
KARS-212ENST00000570215 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
KARS-212ENST00000570215 CDK13Q14004 1512 aaKnown RBP24.07■■□□□ 1.44
KARS-212ENST00000570215 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
KARS-212ENST00000570215 ABCA9Q8IUA7 1624 aa24.06■■□□□ 1.44
KARS-212ENST00000570215 PLEKHD1A6NEE1 506 aa24.02■■□□□ 1.44
KARS-212ENST00000570215 FMN1Q68DA7 1419 aa24.01■■□□□ 1.43
KARS-212ENST00000570215 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
KARS-212ENST00000570215 LRRIQ1Q96JM4 1722 aa23.95■■□□□ 1.42
KARS-212ENST00000570215 HECW1Q76N89 1606 aa23.95■■□□□ 1.42
KARS-212ENST00000570215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.94■■□□□ 1.42
KARS-212ENST00000570215 TTC37Q6PGP7 1564 aa23.92■■□□□ 1.42
KARS-212ENST00000570215 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
KARS-212ENST00000570215 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
KARS-212ENST00000570215 CLIP1P30622 1438 aa23.89■■□□□ 1.41
KARS-212ENST00000570215 PCF11O94913 1555 aaKnown RBP23.89■■□□□ 1.41
KARS-212ENST00000570215 RAPGEF3O95398 923 aa23.88■■□□□ 1.41
KARS-212ENST00000570215 NEO1Q92859 1461 aa23.85■■□□□ 1.41
KARS-212ENST00000570215 KIF14Q15058 1648 aa23.84■■□□□ 1.41
KARS-212ENST00000570215 CASKIN1Q8WXD9 1431 aa23.84■■□□□ 1.41
KARS-212ENST00000570215 ADGRL1O94910 1474 aa23.81■■□□□ 1.4
KARS-212ENST00000570215 PHLDB1Q86UU1 1377 aa23.81■■□□□ 1.4
KARS-212ENST00000570215 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
KARS-212ENST00000570215 FRMPD1Q5SYB0 1578 aa23.81■■□□□ 1.4
KARS-212ENST00000570215 FANCAO15360 1455 aa23.8■■□□□ 1.4
KARS-212ENST00000570215 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
KARS-212ENST00000570215 TROQ12816 1431 aaPredicted RBP23.78■■□□□ 1.4
KARS-212ENST00000570215 CDK11AQ9UQ88 783 aaPredicted RBP23.78■■□□□ 1.4
KARS-212ENST00000570215 PLCH2O75038 1416 aa23.76■■□□□ 1.39
KARS-212ENST00000570215 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
KARS-212ENST00000570215 CEP162Q5TB80 1403 aa23.73■■□□□ 1.39
KARS-212ENST00000570215 CCDC18Q5T9S5 1454 aa23.72■■□□□ 1.39
KARS-212ENST00000570215 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
KARS-212ENST00000570215 DENND4BO75064 1496 aaPredicted RBP23.71■■□□□ 1.39
KARS-212ENST00000570215 MYO5CQ9NQX4 1742 aa23.7■■□□□ 1.39
KARS-212ENST00000570215 CFAP74Q9C0B2 1584 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms