RNA–Protein interactions for RNA: ENST00000570215.1

KARS-212, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-212ENST00000570215 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
KARS-212ENST00000570215 CCDC180Q9P1Z9 1646 aa32.26■■■□□ 2.76
KARS-212ENST00000570215 ABCC9O60706 1549 aa32.03■■■□□ 2.72
KARS-212ENST00000570215 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
KARS-212ENST00000570215 DCAF8L2P0C7V8 631 aa30.53■■■□□ 2.48
KARS-212ENST00000570215 NACADO15069 1562 aa30.41■■■□□ 2.46
KARS-212ENST00000570215 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
KARS-212ENST00000570215 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
KARS-212ENST00000570215 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
KARS-212ENST00000570215 UNC13AQ9UPW8 1703 aa29.95■■■□□ 2.38
KARS-212ENST00000570215 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
KARS-212ENST00000570215 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
KARS-212ENST00000570215 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
KARS-212ENST00000570215 BICRAQ9NZM4 1560 aa29.74■■■□□ 2.35
KARS-212ENST00000570215 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
KARS-212ENST00000570215 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
KARS-212ENST00000570215 SHROOM4Q9ULL8 1493 aa29.16■■■□□ 2.26
KARS-212ENST00000570215 EIF4G1Q04637 1599 aaKnown RBP28.93■■■□□ 2.22
KARS-212ENST00000570215 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
KARS-212ENST00000570215 CECR2Q9BXF3 1484 aa28.74■■■□□ 2.19
KARS-212ENST00000570215 SMARCA4P51532 1647 aa28.19■■■□□ 2.1
KARS-212ENST00000570215 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
KARS-212ENST00000570215 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
KARS-212ENST00000570215 BAZ1AQ9NRL2 1556 aaPredicted RBP28.06■■■□□ 2.08
KARS-212ENST00000570215 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
KARS-212ENST00000570215 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
KARS-212ENST00000570215 HMGXB3Q12766 1538 aa27.9■■■□□ 2.06
KARS-212ENST00000570215 PEG3Q9GZU2 1588 aa27.86■■■□□ 2.05
KARS-212ENST00000570215 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
KARS-212ENST00000570215 WIZO95785 1651 aa27.69■■■□□ 2.02
KARS-212ENST00000570215 NESP48681 1621 aa27.67■■■□□ 2.02
KARS-212ENST00000570215 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
KARS-212ENST00000570215 ERCC6Q03468 1493 aa27.53■■■□□ 2
KARS-212ENST00000570215 LAMC3Q9Y6N6 1575 aa27.38■■□□□ 1.97
KARS-212ENST00000570215 CADPSQ9ULU8 1353 aa27.29■■□□□ 1.96
KARS-212ENST00000570215 CUX2O14529 1486 aa27.29■■□□□ 1.96
KARS-212ENST00000570215 TOP2AP11388 1531 aaKnown RBP27.29■■□□□ 1.96
KARS-212ENST00000570215 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
KARS-212ENST00000570215 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
KARS-212ENST00000570215 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
KARS-212ENST00000570215 CFTRP13569 1480 aa27.06■■□□□ 1.92
KARS-212ENST00000570215 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
KARS-212ENST00000570215 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
KARS-212ENST00000570215 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
KARS-212ENST00000570215 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
KARS-212ENST00000570215 WDR62O43379 1518 aa26.9■■□□□ 1.9
KARS-212ENST00000570215 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
KARS-212ENST00000570215 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
KARS-212ENST00000570215 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
KARS-212ENST00000570215 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
KARS-212ENST00000570215 TOPBP1Q92547 1522 aa26.54■■□□□ 1.84
KARS-212ENST00000570215 DNMBPQ6XZF7 1577 aa26.45■■□□□ 1.82
KARS-212ENST00000570215 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
KARS-212ENST00000570215 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
KARS-212ENST00000570215 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
KARS-212ENST00000570215 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
KARS-212ENST00000570215 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
KARS-212ENST00000570215 CUX1P39880 1505 aa26.28■■□□□ 1.8
KARS-212ENST00000570215 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
KARS-212ENST00000570215 EIF4G3O43432 1585 aaKnown RBP26.23■■□□□ 1.79
KARS-212ENST00000570215 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.798e-6■□□□□ 10
KARS-212ENST00000570215 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
KARS-212ENST00000570215 SOGA1O94964 1423 aa26.18■■□□□ 1.78
KARS-212ENST00000570215 OSCARQ8IYS5 282 aa26.17■■□□□ 1.78
KARS-212ENST00000570215 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
KARS-212ENST00000570215 CHD1O14646 1710 aa25.98■■□□□ 1.75
KARS-212ENST00000570215 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
KARS-212ENST00000570215 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
KARS-212ENST00000570215 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
KARS-212ENST00000570215 FBLN2P98095 1184 aa25.96■■□□□ 1.75
KARS-212ENST00000570215 PHF23Q9BUL5 403 aaPredicted RBP25.96■■□□□ 1.75
KARS-212ENST00000570215 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
KARS-212ENST00000570215 SNAPC4Q5SXM2 1469 aa25.93■■□□□ 1.74
KARS-212ENST00000570215 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
KARS-212ENST00000570215 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
KARS-212ENST00000570215 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
KARS-212ENST00000570215 GRIN2BQ13224 1484 aa25.87■■□□□ 1.73
KARS-212ENST00000570215 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
KARS-212ENST00000570215 RIMBP3CA6NJZ7 1639 aa25.83■■□□□ 1.73
KARS-212ENST00000570215 RIMBP3BA6NNM3 1639 aa25.83■■□□□ 1.73
KARS-212ENST00000570215 RIMBP3Q9UFD9 1639 aa25.83■■□□□ 1.73
KARS-212ENST00000570215 PBRM1Q86U86 1689 aa25.83■■□□□ 1.73
KARS-212ENST00000570215 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
KARS-212ENST00000570215 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
KARS-212ENST00000570215 CHMP7Q8WUX9 453 aaPredicted RBP25.78■■□□□ 1.72
KARS-212ENST00000570215 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
KARS-212ENST00000570215 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
KARS-212ENST00000570215 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
KARS-212ENST00000570215 CYB5RLQ6IPT4 315 aa25.61■■□□□ 1.69
KARS-212ENST00000570215 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
KARS-212ENST00000570215 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
KARS-212ENST00000570215 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
KARS-212ENST00000570215 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
KARS-212ENST00000570215 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
KARS-212ENST00000570215 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
KARS-212ENST00000570215 NUP160Q12769 1436 aa25.46■■□□□ 1.67
KARS-212ENST00000570215 ERCC6L2Q5T890 1561 aa25.4■■□□□ 1.66
KARS-212ENST00000570215 IGF1RP08069 1367 aa25.4■■□□□ 1.66
KARS-212ENST00000570215 SENP3Q9H4L4 574 aaPredicted RBP25.39■■□□□ 1.66
KARS-212ENST00000570215 KIF27Q86VH2 1401 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms