RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
HERPUD1-218ENST00000569569 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
HERPUD1-218ENST00000569569 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
HERPUD1-218ENST00000569569 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
HERPUD1-218ENST00000569569 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
HERPUD1-218ENST00000569569 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
HERPUD1-218ENST00000569569 IQGAP2Q13576 1575 aa23.16■■□□□ 1.3
HERPUD1-218ENST00000569569 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
HERPUD1-218ENST00000569569 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
HERPUD1-218ENST00000569569 EEA1Q15075 1411 aa23.15■■□□□ 1.3
HERPUD1-218ENST00000569569 CTTNBP2Q8WZ74 1663 aa23.1■■□□□ 1.29
HERPUD1-218ENST00000569569 CARMIL2Q6F5E8 1435 aa23.07■■□□□ 1.28
HERPUD1-218ENST00000569569 FAM9AQ8IZU1 332 aaPredicted RBP23.04■■□□□ 1.28
HERPUD1-218ENST00000569569 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
HERPUD1-218ENST00000569569 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
HERPUD1-218ENST00000569569 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
HERPUD1-218ENST00000569569 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
HERPUD1-218ENST00000569569 PTPRGP23470 1445 aa22.98■■□□□ 1.27
HERPUD1-218ENST00000569569 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
HERPUD1-218ENST00000569569 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
HERPUD1-218ENST00000569569 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
HERPUD1-218ENST00000569569 KIF21BO75037 1637 aa22.91■■□□□ 1.26
HERPUD1-218ENST00000569569 NPM1P06748 294 aaKnown RBP eCLIP22.91■■□□□ 1.26
HERPUD1-218ENST00000569569 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
HERPUD1-218ENST00000569569 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
HERPUD1-218ENST00000569569 UHRF1BP1LA0JNW5 1464 aa22.8■■□□□ 1.24
HERPUD1-218ENST00000569569 MAPKBP1O60336 1514 aa22.79■■□□□ 1.24
HERPUD1-218ENST00000569569 ABCC2Q92887 1545 aa22.77■■□□□ 1.24
HERPUD1-218ENST00000569569 KIF13AQ9H1H9 1805 aa22.77■■□□□ 1.24
HERPUD1-218ENST00000569569 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
HERPUD1-218ENST00000569569 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
HERPUD1-218ENST00000569569 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
HERPUD1-218ENST00000569569 EHMT2Q96KQ7 1210 aa22.73■■□□□ 1.23
HERPUD1-218ENST00000569569 RANGAP1P46060 587 aaPredicted RBP22.71■■□□□ 1.23
HERPUD1-218ENST00000569569 ABCC10Q5T3U5 1492 aa22.7■■□□□ 1.22
HERPUD1-218ENST00000569569 PLB1Q6P1J6 1458 aa22.7■■□□□ 1.22
HERPUD1-218ENST00000569569 ABCA8O94911 1581 aa22.69■■□□□ 1.22
HERPUD1-218ENST00000569569 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
HERPUD1-218ENST00000569569 FAM69CQ0P6D2 419 aa22.67■■□□□ 1.22
HERPUD1-218ENST00000569569 ZCCHC11Q5TAX3 1644 aaKnown RBP22.67■■□□□ 1.22
HERPUD1-218ENST00000569569 DIP2BQ9P265 1576 aa22.66■■□□□ 1.22
HERPUD1-218ENST00000569569 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.21
HERPUD1-218ENST00000569569 ASXL2Q76L83 1435 aa22.64■■□□□ 1.21
HERPUD1-218ENST00000569569 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
HERPUD1-218ENST00000569569 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
HERPUD1-218ENST00000569569 TSPOAP1O95153 1857 aa22.56■■□□□ 1.2
HERPUD1-218ENST00000569569 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
HERPUD1-218ENST00000569569 GLI2P10070 1586 aa22.54■■□□□ 1.2
HERPUD1-218ENST00000569569 ATP10BO94823 1461 aa22.51■■□□□ 1.19
HERPUD1-218ENST00000569569 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
HERPUD1-218ENST00000569569 WDR7Q9Y4E6 1490 aa22.51■■□□□ 1.19
HERPUD1-218ENST00000569569 EPRSP07814 1512 aaKnown RBP22.51■■□□□ 1.19
HERPUD1-218ENST00000569569 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
HERPUD1-218ENST00000569569 NUP153P49790 1475 aaKnown RBP22.45■■□□□ 1.18
HERPUD1-218ENST00000569569 FMN1Q68DA7 1419 aa22.44■■□□□ 1.18
HERPUD1-218ENST00000569569 MAP3K4Q9Y6R4 1608 aa22.43■■□□□ 1.18
HERPUD1-218ENST00000569569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
HERPUD1-218ENST00000569569 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
HERPUD1-218ENST00000569569 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
HERPUD1-218ENST00000569569 PPRC1Q5VV67 1664 aaKnown RBP22.41■■□□□ 1.18
HERPUD1-218ENST00000569569 CFAP43Q8NDM7 1665 aa22.38■■□□□ 1.17
HERPUD1-218ENST00000569569 CLIP1P30622 1438 aa22.34■■□□□ 1.17
HERPUD1-218ENST00000569569 PLEKHD1A6NEE1 506 aa22.34■■□□□ 1.17
HERPUD1-218ENST00000569569 HECW1Q76N89 1606 aa22.34■■□□□ 1.17
HERPUD1-218ENST00000569569 KDM6BO15054 1643 aa22.33■■□□□ 1.17
HERPUD1-218ENST00000569569 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
HERPUD1-218ENST00000569569 TEX14Q8IWB6 1497 aa22.33■■□□□ 1.16
HERPUD1-218ENST00000569569 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
HERPUD1-218ENST00000569569 ABCA9Q8IUA7 1624 aa22.29■■□□□ 1.16
HERPUD1-218ENST00000569569 CDK13Q14004 1512 aaKnown RBP22.28■■□□□ 1.16
HERPUD1-218ENST00000569569 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
HERPUD1-218ENST00000569569 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
HERPUD1-218ENST00000569569 LRRIQ1Q96JM4 1722 aa22.26■■□□□ 1.15
HERPUD1-218ENST00000569569 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
HERPUD1-218ENST00000569569 CDK11AQ9UQ88 783 aaPredicted RBP22.23■■□□□ 1.15
HERPUD1-218ENST00000569569 PCF11O94913 1555 aaKnown RBP22.23■■□□□ 1.15
HERPUD1-218ENST00000569569 CEP162Q5TB80 1403 aa22.22■■□□□ 1.15
HERPUD1-218ENST00000569569 COL17A1Q9UMD9 1497 aaPredicted RBP22.18■■□□□ 1.14
HERPUD1-218ENST00000569569 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
HERPUD1-218ENST00000569569 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
HERPUD1-218ENST00000569569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.16■■□□□ 1.146e-6■■■■□ 21.5
HERPUD1-218ENST00000569569 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
HERPUD1-218ENST00000569569 PHLDB1Q86UU1 1377 aa22.13■■□□□ 1.13
HERPUD1-218ENST00000569569 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
HERPUD1-218ENST00000569569 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
HERPUD1-218ENST00000569569 NEO1Q92859 1461 aa22.1■■□□□ 1.13
HERPUD1-218ENST00000569569 ARAP3Q8WWN8 1544 aa22.1■■□□□ 1.13
HERPUD1-218ENST00000569569 KIF14Q15058 1648 aa22.09■■□□□ 1.13
HERPUD1-218ENST00000569569 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
HERPUD1-218ENST00000569569 CFAP74Q9C0B2 1584 aa22.06■■□□□ 1.12
HERPUD1-218ENST00000569569 PLCH2O75038 1416 aa22.04■■□□□ 1.12
HERPUD1-218ENST00000569569 FANCAO15360 1455 aa22.03■■□□□ 1.12
HERPUD1-218ENST00000569569 AKNAQ7Z591 1439 aa22.02■■□□□ 1.12
HERPUD1-218ENST00000569569 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
HERPUD1-218ENST00000569569 EFCAB2Q5VUJ9 269 aa21.97■■□□□ 1.11
HERPUD1-218ENST00000569569 CDC42BPBQ9Y5S2 1711 aa21.97■■□□□ 1.11
HERPUD1-218ENST00000569569 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
HERPUD1-218ENST00000569569 DENND4BO75064 1496 aaPredicted RBP21.95■■□□□ 1.1
HERPUD1-218ENST00000569569 RICTORQ6R327 1708 aa21.94■■□□□ 1.1
HERPUD1-218ENST00000569569 MTUS2Q5JR59 1369 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms