RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
USB1-215ENST00000569252 JPH4Q96JJ6 628 aa26.63■■□□□ 1.85
USB1-215ENST00000569252 RUSC2Q8N2Y8 1516 aa26.63■■□□□ 1.85
USB1-215ENST00000569252 ADCY10Q96PN6 1610 aa26.51■■□□□ 1.83
USB1-215ENST00000569252 FAM69CQ0P6D2 419 aa26.51■■□□□ 1.83
USB1-215ENST00000569252 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
USB1-215ENST00000569252 ABCC10Q5T3U5 1492 aa26.45■■□□□ 1.82
USB1-215ENST00000569252 EEA1Q15075 1411 aa26.45■■□□□ 1.82
USB1-215ENST00000569252 DIP2BQ9P265 1576 aa26.45■■□□□ 1.82
USB1-215ENST00000569252 IGF1RP08069 1367 aa26.45■■□□□ 1.82
USB1-215ENST00000569252 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
USB1-215ENST00000569252 CSRNP3Q8WYN3 585 aa26.42■■□□□ 1.82
USB1-215ENST00000569252 TSPOAP1O95153 1857 aa26.39■■□□□ 1.82
USB1-215ENST00000569252 MAPKBP1O60336 1514 aa26.39■■□□□ 1.81
USB1-215ENST00000569252 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
USB1-215ENST00000569252 KIAA0586Q9BVV6 1533 aa26.35■■□□□ 1.81
USB1-215ENST00000569252 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
USB1-215ENST00000569252 KDM6BO15054 1643 aa26.29■■□□□ 1.8
USB1-215ENST00000569252 CUL7Q14999 1698 aa26.29■■□□□ 1.8
USB1-215ENST00000569252 KDM4FA0A1W2PPD8 638 aa26.24■■□□□ 1.79
USB1-215ENST00000569252 PTPRGP23470 1445 aa26.22■■□□□ 1.79
USB1-215ENST00000569252 RAPGEF2Q9Y4G8 1499 aa26.2■■□□□ 1.78
USB1-215ENST00000569252 PRXQ9BXM0 1461 aa26.15■■□□□ 1.78
USB1-215ENST00000569252 PPRC1Q5VV67 1664 aaKnown RBP26.12■■□□□ 1.77
USB1-215ENST00000569252 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
USB1-215ENST00000569252 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
USB1-215ENST00000569252 ASXL2Q76L83 1435 aa26.11■■□□□ 1.77
USB1-215ENST00000569252 ABCC2Q92887 1545 aa26.1■■□□□ 1.77
USB1-215ENST00000569252 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
USB1-215ENST00000569252 UBTFP17480 764 aaKnown RBP26.08■■□□□ 1.77
USB1-215ENST00000569252 DISP1Q96F81 1524 aa26.06■■□□□ 1.76
USB1-215ENST00000569252 CARMIL2Q6F5E8 1435 aa26.05■■□□□ 1.76
USB1-215ENST00000569252 KIF21BO75037 1637 aa26.01■■□□□ 1.75
USB1-215ENST00000569252 COL17A1Q9UMD9 1497 aaPredicted RBP26■■□□□ 1.75
USB1-215ENST00000569252 GOLGA3Q08378 1498 aa25.99■■□□□ 1.75
USB1-215ENST00000569252 UACAQ9BZF9 1416 aa25.99■■□□□ 1.75
USB1-215ENST00000569252 PLB1Q6P1J6 1458 aa25.98■■□□□ 1.75
USB1-215ENST00000569252 GLI2P10070 1586 aa25.97■■□□□ 1.75
USB1-215ENST00000569252 UHRF1BP1LA0JNW5 1464 aa25.96■■□□□ 1.75
USB1-215ENST00000569252 ZCCHC11Q5TAX3 1644 aaKnown RBP25.95■■□□□ 1.74
USB1-215ENST00000569252 EPRSP07814 1512 aaKnown RBP25.93■■□□□ 1.74
USB1-215ENST00000569252 ADGRL1O94910 1474 aa25.93■■□□□ 1.74
USB1-215ENST00000569252 KIAA0556O60303 1618 aa25.92■■□□□ 1.74
USB1-215ENST00000569252 UGGT2Q9NYU1 1516 aa25.9■■□□□ 1.74
USB1-215ENST00000569252 MAP3K4Q9Y6R4 1608 aa25.9■■□□□ 1.74
USB1-215ENST00000569252 KDM5BQ9UGL1 1544 aa25.89■■□□□ 1.74
USB1-215ENST00000569252 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
USB1-215ENST00000569252 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
USB1-215ENST00000569252 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
USB1-215ENST00000569252 ILDR1Q86SU0 546 aaPredicted RBP25.8■■□□□ 1.72
USB1-215ENST00000569252 WDR7Q9Y4E6 1490 aa25.76■■□□□ 1.71
USB1-215ENST00000569252 ARID3CA6NKF2 412 aa25.74■■□□□ 1.71
USB1-215ENST00000569252 TEX14Q8IWB6 1497 aa25.73■■□□□ 1.71
USB1-215ENST00000569252 KCNH8Q96L42 1107 aa25.73■■□□□ 1.71
USB1-215ENST00000569252 HECW2Q9P2P5 1572 aa25.7■■□□□ 1.71
USB1-215ENST00000569252 ABCA8O94911 1581 aa25.69■■□□□ 1.7
USB1-215ENST00000569252 P3H3Q8IVL6 736 aa25.67■■□□□ 1.7
USB1-215ENST00000569252 CD109Q6YHK3 1445 aa25.63■■□□□ 1.69
USB1-215ENST00000569252 CFAP43Q8NDM7 1665 aa25.6■■□□□ 1.69
USB1-215ENST00000569252 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.68
USB1-215ENST00000569252 CLIP1P30622 1438 aa25.56■■□□□ 1.68
USB1-215ENST00000569252 EFCAB5A4FU69 1503 aa25.55■■□□□ 1.68
USB1-215ENST00000569252 CEP162Q5TB80 1403 aa25.52■■□□□ 1.68
USB1-215ENST00000569252 SAMD9Q5K651 1589 aa25.49■■□□□ 1.67
USB1-215ENST00000569252 ATP10BO94823 1461 aa25.48■■□□□ 1.67
USB1-215ENST00000569252 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
USB1-215ENST00000569252 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
USB1-215ENST00000569252 FMN1Q68DA7 1419 aa25.4■■□□□ 1.66
USB1-215ENST00000569252 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
USB1-215ENST00000569252 RAPGEF3O95398 923 aa25.39■■□□□ 1.66
USB1-215ENST00000569252 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
USB1-215ENST00000569252 ABCA9Q8IUA7 1624 aa25.37■■□□□ 1.65
USB1-215ENST00000569252 RAPGEF6Q8TEU7 1601 aa25.35■■□□□ 1.65
USB1-215ENST00000569252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.34■■□□□ 1.65
USB1-215ENST00000569252 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
USB1-215ENST00000569252 FRMPD1Q5SYB0 1578 aa25.33■■□□□ 1.65
USB1-215ENST00000569252 ADAMTSL3P82987 1691 aa25.29■■□□□ 1.64
USB1-215ENST00000569252 PTPRMP28827 1452 aa25.28■■□□□ 1.64
USB1-215ENST00000569252 NUP153P49790 1475 aaKnown RBP25.28■■□□□ 1.64
USB1-215ENST00000569252 MADDQ8WXG6 1647 aa25.25■■□□□ 1.63
USB1-215ENST00000569252 BCORL1Q5H9F3 1711 aa25.21■■□□□ 1.63
USB1-215ENST00000569252 ARID4BQ4LE39 1312 aaPredicted RBP25.21■■□□□ 1.63
USB1-215ENST00000569252 APLP2Q06481 763 aa25.2■■□□□ 1.62
USB1-215ENST00000569252 PLPPR3Q6T4P5 718 aa25.2■■□□□ 1.62
USB1-215ENST00000569252 NEO1Q92859 1461 aa25.2■■□□□ 1.62
USB1-215ENST00000569252 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.62
USB1-215ENST00000569252 VPS8Q8N3P4 1428 aa25.19■■□□□ 1.62
USB1-215ENST00000569252 CDK11AQ9UQ88 783 aaPredicted RBP25.17■■□□□ 1.62
USB1-215ENST00000569252 SIGLEC1Q9BZZ2 1709 aa25.16■■□□□ 1.62
USB1-215ENST00000569252 RIMS1Q86UR5 1692 aaKnown RBP25.16■■□□□ 1.62
USB1-215ENST00000569252 RICTORQ6R327 1708 aa25.14■■□□□ 1.61
USB1-215ENST00000569252 FYCO1Q9BQS8 1478 aa25.14■■□□□ 1.61
USB1-215ENST00000569252 TTC37Q6PGP7 1564 aa25.14■■□□□ 1.61
USB1-215ENST00000569252 HECW1Q76N89 1606 aa25.13■■□□□ 1.61
USB1-215ENST00000569252 PHLDB1Q86UU1 1377 aa25.13■■□□□ 1.61
USB1-215ENST00000569252 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
USB1-215ENST00000569252 PLEKHD1A6NEE1 506 aa25.12■■□□□ 1.61
USB1-215ENST00000569252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.61
USB1-215ENST00000569252 LMTK3Q96Q04 1460 aa25.1■■□□□ 1.61
USB1-215ENST00000569252 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms