RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
SNX29-207ENST00000568949 NPM1P06748 294 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNX29-207ENST00000568949 FAM69CQ0P6D2 419 aa22.39■■□□□ 1.17
SNX29-207ENST00000568949 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
SNX29-207ENST00000568949 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
SNX29-207ENST00000568949 DIP2BQ9P265 1576 aa22.31■■□□□ 1.16
SNX29-207ENST00000568949 ADCY10Q96PN6 1610 aa22.3■■□□□ 1.16
SNX29-207ENST00000568949 KIAA0586Q9BVV6 1533 aa22.26■■□□□ 1.15
SNX29-207ENST00000568949 KDM6BO15054 1643 aa22.23■■□□□ 1.15
SNX29-207ENST00000568949 IGF1RP08069 1367 aa22.19■■□□□ 1.14
SNX29-207ENST00000568949 KDM4FA0A1W2PPD8 638 aa22.18■■□□□ 1.14
SNX29-207ENST00000568949 CUL7Q14999 1698 aa22.17■■□□□ 1.14
SNX29-207ENST00000568949 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
SNX29-207ENST00000568949 KIF27Q86VH2 1401 aa22.15■■□□□ 1.14
SNX29-207ENST00000568949 PTPRGP23470 1445 aa22.13■■□□□ 1.13
SNX29-207ENST00000568949 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
SNX29-207ENST00000568949 TNIKQ9UKE5 1360 aa22.06■■□□□ 1.12
SNX29-207ENST00000568949 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
SNX29-207ENST00000568949 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
SNX29-207ENST00000568949 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
SNX29-207ENST00000568949 GLI2P10070 1586 aa22.03■■□□□ 1.12
SNX29-207ENST00000568949 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
SNX29-207ENST00000568949 UHRF1BP1LA0JNW5 1464 aa22■■□□□ 1.11
SNX29-207ENST00000568949 TTBK1Q5TCY1 1321 aaPredicted RBP21.99■■□□□ 1.11
SNX29-207ENST00000568949 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
SNX29-207ENST00000568949 IQGAP2Q13576 1575 aa21.96■■□□□ 1.11
SNX29-207ENST00000568949 UACAQ9BZF9 1416 aa21.95■■□□□ 1.1
SNX29-207ENST00000568949 ADGRL1O94910 1474 aa21.9■■□□□ 1.1
SNX29-207ENST00000568949 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
SNX29-207ENST00000568949 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.09
SNX29-207ENST00000568949 KDM5BQ9UGL1 1544 aa21.89■■□□□ 1.09
SNX29-207ENST00000568949 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
SNX29-207ENST00000568949 COL17A1Q9UMD9 1497 aaPredicted RBP21.87■■□□□ 1.09
SNX29-207ENST00000568949 MAP3K4Q9Y6R4 1608 aa21.87■■□□□ 1.09
SNX29-207ENST00000568949 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
SNX29-207ENST00000568949 UGGT2Q9NYU1 1516 aa21.84■■□□□ 1.09
SNX29-207ENST00000568949 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
SNX29-207ENST00000568949 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
SNX29-207ENST00000568949 KIAA0556O60303 1618 aa21.77■■□□□ 1.07
SNX29-207ENST00000568949 WDR7Q9Y4E6 1490 aa21.73■■□□□ 1.07
SNX29-207ENST00000568949 HECW2Q9P2P5 1572 aa21.73■■□□□ 1.07
SNX29-207ENST00000568949 MAGI3Q5TCQ9 1506 aa21.67■■□□□ 1.06
SNX29-207ENST00000568949 CD109Q6YHK3 1445 aa21.65■■□□□ 1.06
SNX29-207ENST00000568949 CFAP43Q8NDM7 1665 aa21.65■■□□□ 1.06
SNX29-207ENST00000568949 GOLGA3Q08378 1498 aa21.64■■□□□ 1.05
SNX29-207ENST00000568949 ABCA8O94911 1581 aa21.61■■□□□ 1.05
SNX29-207ENST00000568949 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
SNX29-207ENST00000568949 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
SNX29-207ENST00000568949 ARAP3Q8WWN8 1544 aa21.52■■□□□ 1.04
SNX29-207ENST00000568949 KIF21BO75037 1637 aa21.51■■□□□ 1.03
SNX29-207ENST00000568949 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
SNX29-207ENST00000568949 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
SNX29-207ENST00000568949 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
SNX29-207ENST00000568949 ATP10BO94823 1461 aa21.43■■□□□ 1.02
SNX29-207ENST00000568949 FBXO41Q8TF61 875 aa21.41■■□□□ 1.02
SNX29-207ENST00000568949 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
SNX29-207ENST00000568949 ADAMTSL3P82987 1691 aa21.4■■□□□ 1.02
SNX29-207ENST00000568949 PTPRMP28827 1452 aa21.38■■□□□ 1.01
SNX29-207ENST00000568949 ARID3CA6NKF2 412 aa21.37■■□□□ 1.01
SNX29-207ENST00000568949 NEO1Q92859 1461 aa21.36■■□□□ 1.01
SNX29-207ENST00000568949 RAPGEF3O95398 923 aa21.34■■□□□ 1.01
SNX29-207ENST00000568949 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
SNX29-207ENST00000568949 RAPGEF6Q8TEU7 1601 aa21.29■■□□□ 1
SNX29-207ENST00000568949 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
SNX29-207ENST00000568949 SAMD9Q5K651 1589 aa21.29■■□□□ 1
SNX29-207ENST00000568949 FRMPD1Q5SYB0 1578 aa21.27■■□□□ 1
SNX29-207ENST00000568949 PCF11O94913 1555 aaKnown RBP21.25■□□□□ 0.99
SNX29-207ENST00000568949 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
SNX29-207ENST00000568949 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
SNX29-207ENST00000568949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
SNX29-207ENST00000568949 HNRNPUL2Q1KMD3 747 aaKnown RBP21.24■□□□□ 0.99
SNX29-207ENST00000568949 LMTK3Q96Q04 1460 aa21.22■□□□□ 0.99
SNX29-207ENST00000568949 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
SNX29-207ENST00000568949 ARHGEF40Q8TER5 1519 aa21.2■□□□□ 0.98
SNX29-207ENST00000568949 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
SNX29-207ENST00000568949 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
SNX29-207ENST00000568949 FHOD3Q2V2M9 1422 aa21.17■□□□□ 0.98
SNX29-207ENST00000568949 RICTORQ6R327 1708 aa21.17■□□□□ 0.98
SNX29-207ENST00000568949 AKNAQ7Z591 1439 aa21.16■□□□□ 0.98
SNX29-207ENST00000568949 PLEKHD1A6NEE1 506 aa21.16■□□□□ 0.98
SNX29-207ENST00000568949 RIMS1Q86UR5 1692 aaKnown RBP21.15■□□□□ 0.98
SNX29-207ENST00000568949 CFAP74Q9C0B2 1584 aa21.14■□□□□ 0.98
SNX29-207ENST00000568949 FANCAO15360 1455 aa21.13■□□□□ 0.97
SNX29-207ENST00000568949 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
SNX29-207ENST00000568949 ZMYM4Q5VZL5 1548 aa21.11■□□□□ 0.97
SNX29-207ENST00000568949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.09■□□□□ 0.97
SNX29-207ENST00000568949 MAGI2Q86UL8 1455 aa21.08■□□□□ 0.97
SNX29-207ENST00000568949 EFCAB5A4FU69 1503 aa21.08■□□□□ 0.96
SNX29-207ENST00000568949 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
SNX29-207ENST00000568949 EEA1Q15075 1411 aa21.06■□□□□ 0.96
SNX29-207ENST00000568949 HSPA2P54652 639 aa21.06■□□□□ 0.96
SNX29-207ENST00000568949 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
SNX29-207ENST00000568949 YEATS2Q9ULM3 1422 aa21.04■□□□□ 0.96
SNX29-207ENST00000568949 TTC37Q6PGP7 1564 aa21.04■□□□□ 0.96
SNX29-207ENST00000568949 SIGLEC1Q9BZZ2 1709 aa21.03■□□□□ 0.96
SNX29-207ENST00000568949 HECW1Q76N89 1606 aa21■□□□□ 0.95
SNX29-207ENST00000568949 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
SNX29-207ENST00000568949 CERKQ8TCT0 537 aa21■□□□□ 0.95
SNX29-207ENST00000568949 FER1L4A9Z1Z3 1794 aa20.99■□□□□ 0.95
SNX29-207ENST00000568949 PLCH2O75038 1416 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms