RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
TNRC6A-215ENST00000568903 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
TNRC6A-215ENST00000568903 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
TNRC6A-215ENST00000568903 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.4
TNRC6A-215ENST00000568903 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
TNRC6A-215ENST00000568903 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
TNRC6A-215ENST00000568903 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
TNRC6A-215ENST00000568903 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
TNRC6A-215ENST00000568903 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
TNRC6A-215ENST00000568903 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
TNRC6A-215ENST00000568903 NUP160Q12769 1436 aa17.4■□□□□ 0.38
TNRC6A-215ENST00000568903 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.38
TNRC6A-215ENST00000568903 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
TNRC6A-215ENST00000568903 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
TNRC6A-215ENST00000568903 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
TNRC6A-215ENST00000568903 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
TNRC6A-215ENST00000568903 IGF1RP08069 1367 aa17.23■□□□□ 0.35
TNRC6A-215ENST00000568903 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
TNRC6A-215ENST00000568903 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
TNRC6A-215ENST00000568903 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
TNRC6A-215ENST00000568903 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
TNRC6A-215ENST00000568903 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
TNRC6A-215ENST00000568903 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
TNRC6A-215ENST00000568903 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
TNRC6A-215ENST00000568903 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
TNRC6A-215ENST00000568903 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
TNRC6A-215ENST00000568903 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
TNRC6A-215ENST00000568903 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
TNRC6A-215ENST00000568903 CUL7Q14999 1698 aa17.06■□□□□ 0.32
TNRC6A-215ENST00000568903 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
TNRC6A-215ENST00000568903 ABCC10Q5T3U5 1492 aa17.02■□□□□ 0.32
TNRC6A-215ENST00000568903 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
TNRC6A-215ENST00000568903 PTPRGP23470 1445 aa16.98■□□□□ 0.31
TNRC6A-215ENST00000568903 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
TNRC6A-215ENST00000568903 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
TNRC6A-215ENST00000568903 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
TNRC6A-215ENST00000568903 IQGAP2Q13576 1575 aa16.92■□□□□ 0.3
TNRC6A-215ENST00000568903 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
TNRC6A-215ENST00000568903 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
TNRC6A-215ENST00000568903 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
TNRC6A-215ENST00000568903 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
TNRC6A-215ENST00000568903 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
TNRC6A-215ENST00000568903 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
TNRC6A-215ENST00000568903 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
TNRC6A-215ENST00000568903 UACAQ9BZF9 1416 aa16.84■□□□□ 0.29
TNRC6A-215ENST00000568903 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
TNRC6A-215ENST00000568903 KDM6BO15054 1643 aa16.81■□□□□ 0.28
TNRC6A-215ENST00000568903 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
TNRC6A-215ENST00000568903 KDM4FA0A1W2PPD8 638 aa16.8■□□□□ 0.28
TNRC6A-215ENST00000568903 ZBTB22O15209 634 aa16.8■□□□□ 0.28
TNRC6A-215ENST00000568903 KIAA0556O60303 1618 aa16.78■□□□□ 0.28
TNRC6A-215ENST00000568903 PLB1Q6P1J6 1458 aa16.77■□□□□ 0.28
TNRC6A-215ENST00000568903 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.28
TNRC6A-215ENST00000568903 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
TNRC6A-215ENST00000568903 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
TNRC6A-215ENST00000568903 GLI2P10070 1586 aa16.74■□□□□ 0.27
TNRC6A-215ENST00000568903 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
TNRC6A-215ENST00000568903 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
TNRC6A-215ENST00000568903 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
TNRC6A-215ENST00000568903 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
TNRC6A-215ENST00000568903 CTTNBP2Q8WZ74 1663 aa16.7■□□□□ 0.26
TNRC6A-215ENST00000568903 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
TNRC6A-215ENST00000568903 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
TNRC6A-215ENST00000568903 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
TNRC6A-215ENST00000568903 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
TNRC6A-215ENST00000568903 ABCA8O94911 1581 aa16.65■□□□□ 0.26
TNRC6A-215ENST00000568903 WDR7Q9Y4E6 1490 aa16.65■□□□□ 0.26
TNRC6A-215ENST00000568903 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
TNRC6A-215ENST00000568903 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
TNRC6A-215ENST00000568903 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
TNRC6A-215ENST00000568903 FAM9AQ8IZU1 332 aaPredicted RBP16.59■□□□□ 0.25
TNRC6A-215ENST00000568903 ADGRL1O94910 1474 aa16.57■□□□□ 0.24
TNRC6A-215ENST00000568903 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
TNRC6A-215ENST00000568903 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
TNRC6A-215ENST00000568903 ATP10BO94823 1461 aa16.56■□□□□ 0.24
TNRC6A-215ENST00000568903 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.24
TNRC6A-215ENST00000568903 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
TNRC6A-215ENST00000568903 CFAP43Q8NDM7 1665 aa16.5■□□□□ 0.23
TNRC6A-215ENST00000568903 FHOD3Q2V2M9 1422 aa16.47■□□□□ 0.23
TNRC6A-215ENST00000568903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
TNRC6A-215ENST00000568903 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-215ENST00000568903 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
TNRC6A-215ENST00000568903 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
TNRC6A-215ENST00000568903 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
TNRC6A-215ENST00000568903 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
TNRC6A-215ENST00000568903 EEA1Q15075 1411 aa16.41■□□□□ 0.22
TNRC6A-215ENST00000568903 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
TNRC6A-215ENST00000568903 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
TNRC6A-215ENST00000568903 KIF21BO75037 1637 aa16.39■□□□□ 0.21
TNRC6A-215ENST00000568903 HECW2Q9P2P5 1572 aa16.34■□□□□ 0.21
TNRC6A-215ENST00000568903 PLEKHD1A6NEE1 506 aa16.33■□□□□ 0.2
TNRC6A-215ENST00000568903 FRMPD1Q5SYB0 1578 aa16.31■□□□□ 0.2
TNRC6A-215ENST00000568903 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
TNRC6A-215ENST00000568903 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
TNRC6A-215ENST00000568903 CDK13Q14004 1512 aaKnown RBP16.3■□□□□ 0.2
TNRC6A-215ENST00000568903 NEO1Q92859 1461 aa16.3■□□□□ 0.2
TNRC6A-215ENST00000568903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
TNRC6A-215ENST00000568903 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
TNRC6A-215ENST00000568903 ATP1B4Q9UN42 357 aaPredicted RBP16.28■□□□□ 0.2
TNRC6A-215ENST00000568903 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms