RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-215ENST00000568903 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
TNRC6A-215ENST00000568903 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
TNRC6A-215ENST00000568903 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
TNRC6A-215ENST00000568903 ABCC9O60706 1549 aa22.16■■□□□ 1.14
TNRC6A-215ENST00000568903 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
TNRC6A-215ENST00000568903 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
TNRC6A-215ENST00000568903 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
TNRC6A-215ENST00000568903 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
TNRC6A-215ENST00000568903 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
TNRC6A-215ENST00000568903 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
TNRC6A-215ENST00000568903 NACADO15069 1562 aa20.8■□□□□ 0.92
TNRC6A-215ENST00000568903 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
TNRC6A-215ENST00000568903 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
TNRC6A-215ENST00000568903 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
TNRC6A-215ENST00000568903 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
TNRC6A-215ENST00000568903 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.86
TNRC6A-215ENST00000568903 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
TNRC6A-215ENST00000568903 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
TNRC6A-215ENST00000568903 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
TNRC6A-215ENST00000568903 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
TNRC6A-215ENST00000568903 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
TNRC6A-215ENST00000568903 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
TNRC6A-215ENST00000568903 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
TNRC6A-215ENST00000568903 FOXD1Q16676 465 aa19.54■□□□□ 0.72
TNRC6A-215ENST00000568903 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
TNRC6A-215ENST00000568903 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
TNRC6A-215ENST00000568903 ADRA2BP18089 450 aa19.19■□□□□ 0.66
TNRC6A-215ENST00000568903 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
TNRC6A-215ENST00000568903 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
TNRC6A-215ENST00000568903 DNAJC5Q9H3Z4 198 aa19.09■□□□□ 0.65
TNRC6A-215ENST00000568903 SMARCA2P51531 1590 aa19.08■□□□□ 0.65
TNRC6A-215ENST00000568903 NESP48681 1621 aa19.07■□□□□ 0.64
TNRC6A-215ENST00000568903 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
TNRC6A-215ENST00000568903 ERCC6Q03468 1493 aa19.05■□□□□ 0.64
TNRC6A-215ENST00000568903 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
TNRC6A-215ENST00000568903 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.63
TNRC6A-215ENST00000568903 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
TNRC6A-215ENST00000568903 CUX2O14529 1486 aa18.97■□□□□ 0.63
TNRC6A-215ENST00000568903 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
TNRC6A-215ENST00000568903 WIZO95785 1651 aa18.78■□□□□ 0.6
TNRC6A-215ENST00000568903 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
TNRC6A-215ENST00000568903 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
TNRC6A-215ENST00000568903 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
TNRC6A-215ENST00000568903 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
TNRC6A-215ENST00000568903 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
TNRC6A-215ENST00000568903 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
TNRC6A-215ENST00000568903 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
TNRC6A-215ENST00000568903 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
TNRC6A-215ENST00000568903 WDR62O43379 1518 aa18.49■□□□□ 0.55
TNRC6A-215ENST00000568903 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
TNRC6A-215ENST00000568903 CFTRP13569 1480 aa18.46■□□□□ 0.55
TNRC6A-215ENST00000568903 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
TNRC6A-215ENST00000568903 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
TNRC6A-215ENST00000568903 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
TNRC6A-215ENST00000568903 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.53
TNRC6A-215ENST00000568903 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
TNRC6A-215ENST00000568903 KCNA4P22459 653 aa18.27■□□□□ 0.52
TNRC6A-215ENST00000568903 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
TNRC6A-215ENST00000568903 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
TNRC6A-215ENST00000568903 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
TNRC6A-215ENST00000568903 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
TNRC6A-215ENST00000568903 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
TNRC6A-215ENST00000568903 IFT140Q96RY7 1462 aa18.08■□□□□ 0.49
TNRC6A-215ENST00000568903 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
TNRC6A-215ENST00000568903 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.477e-11■■■■□ 23.3
TNRC6A-215ENST00000568903 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
TNRC6A-215ENST00000568903 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
TNRC6A-215ENST00000568903 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
TNRC6A-215ENST00000568903 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
TNRC6A-215ENST00000568903 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
TNRC6A-215ENST00000568903 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
TNRC6A-215ENST00000568903 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
TNRC6A-215ENST00000568903 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
TNRC6A-215ENST00000568903 MSH5O43196 834 aa17.91■□□□□ 0.46
TNRC6A-215ENST00000568903 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
TNRC6A-215ENST00000568903 FBLN2P98095 1184 aa17.89■□□□□ 0.45
TNRC6A-215ENST00000568903 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
TNRC6A-215ENST00000568903 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
TNRC6A-215ENST00000568903 SOGA1O94964 1423 aa17.88■□□□□ 0.45
TNRC6A-215ENST00000568903 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
TNRC6A-215ENST00000568903 CHD1O14646 1710 aa17.86■□□□□ 0.45
TNRC6A-215ENST00000568903 CUX1P39880 1505 aa17.84■□□□□ 0.45
TNRC6A-215ENST00000568903 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
TNRC6A-215ENST00000568903 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
TNRC6A-215ENST00000568903 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
TNRC6A-215ENST00000568903 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
TNRC6A-215ENST00000568903 CHMP7Q8WUX9 453 aaPredicted RBP17.71■□□□□ 0.43
TNRC6A-215ENST00000568903 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
TNRC6A-215ENST00000568903 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
TNRC6A-215ENST00000568903 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
TNRC6A-215ENST00000568903 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
TNRC6A-215ENST00000568903 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
TNRC6A-215ENST00000568903 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
TNRC6A-215ENST00000568903 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
TNRC6A-215ENST00000568903 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
TNRC6A-215ENST00000568903 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
TNRC6A-215ENST00000568903 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
TNRC6A-215ENST00000568903 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
TNRC6A-215ENST00000568903 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
TNRC6A-215ENST00000568903 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms