RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 PRG4Q92954 1404 aaPredicted RBP28.12■■■□□ 2.09
CLN6-208ENST00000567060 KIF13AQ9H1H9 1805 aa28.07■■■□□ 2.08
CLN6-208ENST00000567060 FAM69CQ0P6D2 419 aa27.97■■■□□ 2.07
CLN6-208ENST00000567060 EEA1Q15075 1411 aa27.94■■■□□ 2.06
CLN6-208ENST00000567060 IGF1RP08069 1367 aa27.93■■■□□ 2.06
CLN6-208ENST00000567060 ABCC10Q5T3U5 1492 aa27.93■■■□□ 2.06
CLN6-208ENST00000567060 CUL7Q14999 1698 aa27.91■■■□□ 2.06
CLN6-208ENST00000567060 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
CLN6-208ENST00000567060 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
CLN6-208ENST00000567060 MAPKBP1O60336 1514 aa27.85■■■□□ 2.05
CLN6-208ENST00000567060 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
CLN6-208ENST00000567060 DIP2BQ9P265 1576 aa27.81■■■□□ 2.04
CLN6-208ENST00000567060 KIAA0586Q9BVV6 1533 aa27.78■■■□□ 2.04
CLN6-208ENST00000567060 CARMIL1Q5VZK9 1371 aa27.78■■■□□ 2.04
CLN6-208ENST00000567060 KDM4FA0A1W2PPD8 638 aa27.75■■■□□ 2.03
CLN6-208ENST00000567060 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
CLN6-208ENST00000567060 RAPGEF2Q9Y4G8 1499 aa27.69■■■□□ 2.02
CLN6-208ENST00000567060 PRXQ9BXM0 1461 aa27.68■■■□□ 2.02
CLN6-208ENST00000567060 KDM6BO15054 1643 aa27.65■■■□□ 2.02
CLN6-208ENST00000567060 PTPRGP23470 1445 aa27.63■■■□□ 2.01
CLN6-208ENST00000567060 TSPOAP1O95153 1857 aa27.61■■■□□ 2.01
CLN6-208ENST00000567060 TTBK1Q5TCY1 1321 aaPredicted RBP27.57■■■□□ 2
CLN6-208ENST00000567060 KIF21BO75037 1637 aa27.54■■■□□ 2
CLN6-208ENST00000567060 TNIKQ9UKE5 1360 aa27.52■■■□□ 2
CLN6-208ENST00000567060 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
CLN6-208ENST00000567060 ABCC2Q92887 1545 aa27.5■■□□□ 1.99
CLN6-208ENST00000567060 CARMIL2Q6F5E8 1435 aa27.48■■□□□ 1.99
CLN6-208ENST00000567060 ASXL2Q76L83 1435 aa27.48■■□□□ 1.99
CLN6-208ENST00000567060 PLB1Q6P1J6 1458 aa27.44■■□□□ 1.98
CLN6-208ENST00000567060 GLI2P10070 1586 aa27.42■■□□□ 1.98
CLN6-208ENST00000567060 PPRC1Q5VV67 1664 aaKnown RBP27.42■■□□□ 1.98
CLN6-208ENST00000567060 UHRF1BP1LA0JNW5 1464 aa27.41■■□□□ 1.98
CLN6-208ENST00000567060 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
CLN6-208ENST00000567060 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
CLN6-208ENST00000567060 UACAQ9BZF9 1416 aa27.39■■□□□ 1.97
CLN6-208ENST00000567060 IQGAP2Q13576 1575 aa27.39■■□□□ 1.97
CLN6-208ENST00000567060 COL17A1Q9UMD9 1497 aaPredicted RBP27.38■■□□□ 1.97
CLN6-208ENST00000567060 DISP1Q96F81 1524 aa27.37■■□□□ 1.97
CLN6-208ENST00000567060 ILDR1Q86SU0 546 aaPredicted RBP27.32■■□□□ 1.96
CLN6-208ENST00000567060 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
CLN6-208ENST00000567060 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
CLN6-208ENST00000567060 ADGRL1O94910 1474 aa27.3■■□□□ 1.96
CLN6-208ENST00000567060 UGGT2Q9NYU1 1516 aa27.28■■□□□ 1.96
CLN6-208ENST00000567060 MAP3K4Q9Y6R4 1608 aa27.23■■□□□ 1.95
CLN6-208ENST00000567060 UBTFP17480 764 aaKnown RBP27.21■■□□□ 1.95
CLN6-208ENST00000567060 ZCCHC11Q5TAX3 1644 aaKnown RBP27.19■■□□□ 1.94
CLN6-208ENST00000567060 TEX14Q8IWB6 1497 aa27.17■■□□□ 1.94
CLN6-208ENST00000567060 KIAA0556O60303 1618 aa27.15■■□□□ 1.94
CLN6-208ENST00000567060 WDR7Q9Y4E6 1490 aa27.1■■□□□ 1.93
CLN6-208ENST00000567060 EFCAB5A4FU69 1503 aa27.08■■□□□ 1.93
CLN6-208ENST00000567060 SAMD9Q5K651 1589 aa27.07■■□□□ 1.92
CLN6-208ENST00000567060 HECW2Q9P2P5 1572 aa27.05■■□□□ 1.92
CLN6-208ENST00000567060 KCNH8Q96L42 1107 aa27.03■■□□□ 1.92
CLN6-208ENST00000567060 CD109Q6YHK3 1445 aa27.02■■□□□ 1.92
CLN6-208ENST00000567060 EHMT2Q96KQ7 1210 aa27.02■■□□□ 1.92
CLN6-208ENST00000567060 MAGI3Q5TCQ9 1506 aa27■■□□□ 1.91
CLN6-208ENST00000567060 ABCA8O94911 1581 aa26.97■■□□□ 1.91
CLN6-208ENST00000567060 CFAP43Q8NDM7 1665 aa26.92■■□□□ 1.9
CLN6-208ENST00000567060 ARHGAP35Q9NRY4 1499 aa26.89■■□□□ 1.9
CLN6-208ENST00000567060 LOC105371045A0A1W2PR82 267 aa26.88■■□□□ 1.89
CLN6-208ENST00000567060 CLIP1P30622 1438 aa26.87■■□□□ 1.89
CLN6-208ENST00000567060 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
CLN6-208ENST00000567060 FHOD3Q2V2M9 1422 aa26.82■■□□□ 1.88
CLN6-208ENST00000567060 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
CLN6-208ENST00000567060 FMN1Q68DA7 1419 aa26.82■■□□□ 1.88
CLN6-208ENST00000567060 ARID3CA6NKF2 412 aa26.82■■□□□ 1.88
CLN6-208ENST00000567060 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
CLN6-208ENST00000567060 ARAP3Q8WWN8 1544 aa26.81■■□□□ 1.88
CLN6-208ENST00000567060 ATP10BO94823 1461 aa26.81■■□□□ 1.88
CLN6-208ENST00000567060 RAPGEF6Q8TEU7 1601 aa26.72■■□□□ 1.87
CLN6-208ENST00000567060 RAPGEF3O95398 923 aa26.71■■□□□ 1.87
CLN6-208ENST00000567060 PHLDB1Q86UU1 1377 aa26.7■■□□□ 1.86
CLN6-208ENST00000567060 ABCA9Q8IUA7 1624 aa26.68■■□□□ 1.86
CLN6-208ENST00000567060 PTPRMP28827 1452 aa26.66■■□□□ 1.86
CLN6-208ENST00000567060 ADAMTSL3P82987 1691 aa26.64■■□□□ 1.86
CLN6-208ENST00000567060 FBXO41Q8TF61 875 aa26.63■■□□□ 1.85
CLN6-208ENST00000567060 HECW1Q76N89 1606 aa26.61■■□□□ 1.85
CLN6-208ENST00000567060 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
CLN6-208ENST00000567060 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
CLN6-208ENST00000567060 NEO1Q92859 1461 aa26.6■■□□□ 1.85
CLN6-208ENST00000567060 FYCO1Q9BQS8 1478 aa26.58■■□□□ 1.85
CLN6-208ENST00000567060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.56■■□□□ 1.84
CLN6-208ENST00000567060 HNRNPUL2Q1KMD3 747 aaKnown RBP26.56■■□□□ 1.84
CLN6-208ENST00000567060 FRMPD1Q5SYB0 1578 aa26.54■■□□□ 1.84
CLN6-208ENST00000567060 VPS8Q8N3P4 1428 aa26.53■■□□□ 1.84
CLN6-208ENST00000567060 PCF11O94913 1555 aaKnown RBP26.53■■□□□ 1.84
CLN6-208ENST00000567060 ARID4BQ4LE39 1312 aaPredicted RBP26.52■■□□□ 1.84
CLN6-208ENST00000567060 BCORL1Q5H9F3 1711 aa26.51■■□□□ 1.83
CLN6-208ENST00000567060 CCDC18Q5T9S5 1454 aa26.51■■□□□ 1.83
CLN6-208ENST00000567060 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
CLN6-208ENST00000567060 LMTK3Q96Q04 1460 aa26.46■■□□□ 1.83
CLN6-208ENST00000567060 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
CLN6-208ENST00000567060 CDK11AQ9UQ88 783 aaPredicted RBP26.44■■□□□ 1.82
CLN6-208ENST00000567060 ATP1B4Q9UN42 357 aaPredicted RBP26.43■■□□□ 1.82
CLN6-208ENST00000567060 DENND4BO75064 1496 aaPredicted RBP26.42■■□□□ 1.82
CLN6-208ENST00000567060 AKNAQ7Z591 1439 aa26.41■■□□□ 1.82
CLN6-208ENST00000567060 CDK13Q14004 1512 aaKnown RBP26.39■■□□□ 1.81
CLN6-208ENST00000567060 RICTORQ6R327 1708 aa26.38■■□□□ 1.81
CLN6-208ENST00000567060 ARHGEF40Q8TER5 1519 aa26.38■■□□□ 1.81
CLN6-208ENST00000567060 LRRIQ1Q96JM4 1722 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms