RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 JPH4Q96JJ6 628 aa32.42■■■□□ 2.78
CPNE7-208ENST00000566398 PRG4Q92954 1404 aaPredicted RBP32.41■■■□□ 2.78
CPNE7-208ENST00000566398 KIAA0586Q9BVV6 1533 aa32.36■■■□□ 2.77
CPNE7-208ENST00000566398 TRHP20396 242 aaPredicted RBP32.3■■■□□ 2.76
CPNE7-208ENST00000566398 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
CPNE7-208ENST00000566398 IQGAP2Q13576 1575 aa32.11■■■□□ 2.73
CPNE7-208ENST00000566398 CARMIL2Q6F5E8 1435 aa32.06■■■□□ 2.72
CPNE7-208ENST00000566398 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
CPNE7-208ENST00000566398 PTPRGP23470 1445 aa31.99■■■□□ 2.71
CPNE7-208ENST00000566398 TNIKQ9UKE5 1360 aa31.97■■■□□ 2.71
CPNE7-208ENST00000566398 NPM1P06748 294 aaKnown RBP eCLIP31.94■■■□□ 2.7
CPNE7-208ENST00000566398 UGGT2Q9NYU1 1516 aa31.94■■■□□ 2.7
CPNE7-208ENST00000566398 DISP1Q96F81 1524 aa31.92■■■□□ 2.7
CPNE7-208ENST00000566398 TTBK1Q5TCY1 1321 aaPredicted RBP31.92■■■□□ 2.7
CPNE7-208ENST00000566398 ADCY10Q96PN6 1610 aa31.92■■■□□ 2.7
CPNE7-208ENST00000566398 EEA1Q15075 1411 aa31.9■■■□□ 2.7
CPNE7-208ENST00000566398 CSRNP3Q8WYN3 585 aa31.89■■■□□ 2.7
CPNE7-208ENST00000566398 MAPKBP1O60336 1514 aa31.83■■■□□ 2.69
CPNE7-208ENST00000566398 CTTNBP2Q8WZ74 1663 aa31.82■■■□□ 2.68
CPNE7-208ENST00000566398 KIAA0556O60303 1618 aa31.81■■■□□ 2.68
CPNE7-208ENST00000566398 GOLGA3Q08378 1498 aa31.76■■■□□ 2.67
CPNE7-208ENST00000566398 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
CPNE7-208ENST00000566398 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
CPNE7-208ENST00000566398 ABCC2Q92887 1545 aa31.75■■■□□ 2.67
CPNE7-208ENST00000566398 UHRF1BP1LA0JNW5 1464 aa31.73■■■□□ 2.67
CPNE7-208ENST00000566398 ABCC10Q5T3U5 1492 aa31.72■■■□□ 2.67
CPNE7-208ENST00000566398 FAM9AQ8IZU1 332 aaPredicted RBP31.72■■■□□ 2.67
CPNE7-208ENST00000566398 FAM69CQ0P6D2 419 aa31.68■■■□□ 2.66
CPNE7-208ENST00000566398 DIP2BQ9P265 1576 aa31.64■■■□□ 2.65
CPNE7-208ENST00000566398 KIF13AQ9H1H9 1805 aa31.63■■■□□ 2.65
CPNE7-208ENST00000566398 KDM5BQ9UGL1 1544 aa31.58■■■□□ 2.65
CPNE7-208ENST00000566398 ASXL2Q76L83 1435 aa31.58■■■□□ 2.65
CPNE7-208ENST00000566398 PLB1Q6P1J6 1458 aa31.56■■■□□ 2.64
CPNE7-208ENST00000566398 KIF21BO75037 1637 aa31.54■■■□□ 2.64
CPNE7-208ENST00000566398 P3H3Q8IVL6 736 aa31.49■■■□□ 2.63
CPNE7-208ENST00000566398 ABCA8O94911 1581 aa31.48■■■□□ 2.63
CPNE7-208ENST00000566398 SAMD9Q5K651 1589 aa31.47■■■□□ 2.63
CPNE7-208ENST00000566398 ZCCHC11Q5TAX3 1644 aaKnown RBP31.46■■■□□ 2.63
CPNE7-208ENST00000566398 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
CPNE7-208ENST00000566398 GLI2P10070 1586 aa31.39■■■□□ 2.62
CPNE7-208ENST00000566398 EPRSP07814 1512 aaKnown RBP31.38■■■□□ 2.61
CPNE7-208ENST00000566398 WDR7Q9Y4E6 1490 aa31.37■■■□□ 2.61
CPNE7-208ENST00000566398 EHMT2Q96KQ7 1210 aa31.35■■■□□ 2.61
CPNE7-208ENST00000566398 UBTFP17480 764 aaKnown RBP31.33■■■□□ 2.61
CPNE7-208ENST00000566398 FHOD3Q2V2M9 1422 aa31.32■■■□□ 2.61
CPNE7-208ENST00000566398 EFCAB5A4FU69 1503 aa31.3■■■□□ 2.6
CPNE7-208ENST00000566398 ARID3CA6NKF2 412 aa31.27■■■□□ 2.6
CPNE7-208ENST00000566398 TSPOAP1O95153 1857 aa31.25■■■□□ 2.59
CPNE7-208ENST00000566398 RAPGEF6Q8TEU7 1601 aa31.24■■■□□ 2.59
CPNE7-208ENST00000566398 ATP10BO94823 1461 aa31.23■■■□□ 2.59
CPNE7-208ENST00000566398 KDM6BO15054 1643 aa31.23■■■□□ 2.59
CPNE7-208ENST00000566398 MAP3K4Q9Y6R4 1608 aa31.2■■■□□ 2.59
CPNE7-208ENST00000566398 KCNH8Q96L42 1107 aa31.19■■■□□ 2.58
CPNE7-208ENST00000566398 PPRC1Q5VV67 1664 aaKnown RBP31.17■■■□□ 2.58
CPNE7-208ENST00000566398 TEX14Q8IWB6 1497 aa31.17■■■□□ 2.58
CPNE7-208ENST00000566398 NUP153P49790 1475 aaKnown RBP31.16■■■□□ 2.58
CPNE7-208ENST00000566398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.12■■■□□ 2.57
CPNE7-208ENST00000566398 HNRNPUL2Q1KMD3 747 aaKnown RBP31.12■■■□□ 2.57
CPNE7-208ENST00000566398 CD109Q6YHK3 1445 aa31.11■■■□□ 2.57
CPNE7-208ENST00000566398 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
CPNE7-208ENST00000566398 MAGI3Q5TCQ9 1506 aa31.06■■■□□ 2.56
CPNE7-208ENST00000566398 CFAP43Q8NDM7 1665 aa31.05■■■□□ 2.56
CPNE7-208ENST00000566398 FMN1Q68DA7 1419 aa31.05■■■□□ 2.56
CPNE7-208ENST00000566398 COL17A1Q9UMD9 1497 aaPredicted RBP30.99■■■□□ 2.55
CPNE7-208ENST00000566398 PLEKHD1A6NEE1 506 aa30.95■■■□□ 2.55
CPNE7-208ENST00000566398 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
CPNE7-208ENST00000566398 ABCA9Q8IUA7 1624 aa30.94■■■□□ 2.54
CPNE7-208ENST00000566398 CDK13Q14004 1512 aaKnown RBP30.9■■■□□ 2.54
CPNE7-208ENST00000566398 ATP1B4Q9UN42 357 aaPredicted RBP30.9■■■□□ 2.54
CPNE7-208ENST00000566398 HECW1Q76N89 1606 aa30.9■■■□□ 2.54
CPNE7-208ENST00000566398 PHLDB1Q86UU1 1377 aa30.81■■■□□ 2.52
CPNE7-208ENST00000566398 CLIP1P30622 1438 aa30.81■■■□□ 2.52
CPNE7-208ENST00000566398 ARAP3Q8WWN8 1544 aa30.78■■■□□ 2.52
CPNE7-208ENST00000566398 NEO1Q92859 1461 aa30.78■■■□□ 2.52
CPNE7-208ENST00000566398 CDK11AQ9UQ88 783 aaPredicted RBP30.77■■■□□ 2.52
CPNE7-208ENST00000566398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.75■■■□□ 2.512e-8■■□□□ 11.8
CPNE7-208ENST00000566398 CASKIN1Q8WXD9 1431 aa30.74■■■□□ 2.51
CPNE7-208ENST00000566398 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
CPNE7-208ENST00000566398 TTC37Q6PGP7 1564 aa30.71■■■□□ 2.51
CPNE7-208ENST00000566398 KDM4FA0A1W2PPD8 638 aa30.68■■■□□ 2.5
CPNE7-208ENST00000566398 CCDC18Q5T9S5 1454 aa30.68■■■□□ 2.5
CPNE7-208ENST00000566398 TROQ12816 1431 aaPredicted RBP30.66■■■□□ 2.5
CPNE7-208ENST00000566398 FANCAO15360 1455 aa30.66■■■□□ 2.5
CPNE7-208ENST00000566398 FYCO1Q9BQS8 1478 aa30.66■■■□□ 2.5
CPNE7-208ENST00000566398 RAPGEF3O95398 923 aa30.63■■■□□ 2.49
CPNE7-208ENST00000566398 CFAP74Q9C0B2 1584 aa30.62■■■□□ 2.49
CPNE7-208ENST00000566398 AKNAQ7Z591 1439 aa30.61■■■□□ 2.49
CPNE7-208ENST00000566398 KIF14Q15058 1648 aa30.61■■■□□ 2.49
CPNE7-208ENST00000566398 ADGRL1O94910 1474 aa30.6■■■□□ 2.49
CPNE7-208ENST00000566398 PLCH2O75038 1416 aa30.59■■■□□ 2.49
CPNE7-208ENST00000566398 CEP162Q5TB80 1403 aa30.58■■■□□ 2.49
CPNE7-208ENST00000566398 LRRIQ1Q96JM4 1722 aa30.57■■■□□ 2.48
CPNE7-208ENST00000566398 DENND4BO75064 1496 aaPredicted RBP30.57■■■□□ 2.48
CPNE7-208ENST00000566398 FRMPD1Q5SYB0 1578 aa30.54■■■□□ 2.48
CPNE7-208ENST00000566398 EFCAB2Q5VUJ9 269 aa30.49■■■□□ 2.47
CPNE7-208ENST00000566398 MYO5CQ9NQX4 1742 aa30.46■■■□□ 2.47
CPNE7-208ENST00000566398 SCAPERQ9BY12 1400 aa30.45■■■□□ 2.46
CPNE7-208ENST00000566398 ARHGAP5Q13017 1502 aa30.44■■■□□ 2.46
CPNE7-208ENST00000566398 LOC105371045A0A1W2PR82 267 aa30.44■■■□□ 2.46
CPNE7-208ENST00000566398 POGZQ7Z3K3 1410 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms