RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.8■■□□□ 1.082e-15■□□□□ 10.9
CPNE7-208ENST00000566398 HNRNPLP14866 589 aaKnown RBP eCLIP19.8■□□□□ 0.764e-15■■□□□ 13.9
CPNE7-208ENST00000566398 RBFOX2O43251 390 aaKnown RBP eCLIP14.6□□□□□ -0.073e-14■■■■■ 42.5
CPNE7-208ENST00000566398 AGGF1Q8N302 714 aaeCLIP18.32■□□□□ 0.521e-10■□□□□ 10.1
CPNE7-208ENST00000566398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.31■■□□□ 1.324e-10■■■□□ 18.4
CPNE7-208ENST00000566398 EFTUD2Q15029 972 aaKnown RBP eCLIP17.96■□□□□ 0.476e-9■■■□□ 16.8
CPNE7-208ENST00000566398 SF3B4Q15427 424 aaKnown RBP eCLIP17.29■□□□□ 0.361e-8■■■■□ 21.2
CPNE7-208ENST00000566398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.75■■■□□ 2.512e-8■■□□□ 11.8
CPNE7-208ENST00000566398 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.972e-8■■■□□ 15.3
CPNE7-208ENST00000566398 RBM15Q96T37 977 aaKnown RBP eCLIP18.98■□□□□ 0.634e-8■■■■□ 20.1
CPNE7-208ENST00000566398 GTF2F1P35269 517 aaKnown RBP eCLIP21.03■□□□□ 0.961e-7■■■■■ 44.7
CPNE7-208ENST00000566398 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.223e-7■■■■■ 40.6
CPNE7-208ENST00000566398 SRSF1Q07955 248 aaKnown RBP eCLIP17.84■□□□□ 0.455e-7■■□□□ 14
CPNE7-208ENST00000566398 PUM1Q14671 1186 aaKnown RBP eCLIP19.72■□□□□ 0.751e-6■□□□□ 8.1
CPNE7-208ENST00000566398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.07■□□□□ 0.161e-6■□□□□ 10
CPNE7-208ENST00000566398 ZC3H11AO75152 810 aaKnown RBP eCLIP21.03■□□□□ 0.961e-6■■■■□ 24.7
CPNE7-208ENST00000566398 SMNDC1O75940 238 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■□□□ 14.5
CPNE7-208ENST00000566398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■■■■ 67.6
CPNE7-208ENST00000566398 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■□□□ 14.1
CPNE7-208ENST00000566398 RBM22Q9NW64 420 aaKnown RBP eCLIP19.05■□□□□ 0.642e-6■■■□□ 14.9
CPNE7-208ENST00000566398 AARSP49588 968 aaKnown RBP eCLIP20.59■□□□□ 0.894e-6■□□□□ 8.1
CPNE7-208ENST00000566398 FUSP35637 526 aaKnown RBP eCLIP12.73□□□□□ -0.374e-6■■□□□ 12
CPNE7-208ENST00000566398 LARP4Q71RC2 724 aaKnown RBP eCLIP17.35■□□□□ 0.379e-6■■■■■ 29.6
CPNE7-208ENST00000566398 NOLC1Q14978 699 aaKnown RBP eCLIP20.8■□□□□ 0.921e-5■□□□□ 10.6
Retrieved 24 of 24 RNA–protein pairs in 6.9 ms