RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
TRADD-204ENST00000566104 JPH4Q96JJ6 628 aa34.27■■■■□ 3.08
TRADD-204ENST00000566104 KIAA0586Q9BVV6 1533 aa34.25■■■■□ 3.07
TRADD-204ENST00000566104 CARMIL1Q5VZK9 1371 aa34.23■■■■□ 3.07
TRADD-204ENST00000566104 IQGAP2Q13576 1575 aa34.04■■■■□ 3.04
TRADD-204ENST00000566104 RAPGEF2Q9Y4G8 1499 aa34.02■■■■□ 3.04
TRADD-204ENST00000566104 CARMIL2Q6F5E8 1435 aa33.93■■■■□ 3.02
TRADD-204ENST00000566104 ADCY10Q96PN6 1610 aa33.92■■■■□ 3.02
TRADD-204ENST00000566104 CTTNBP2Q8WZ74 1663 aa33.87■■■■□ 3.01
TRADD-204ENST00000566104 KIF13AQ9H1H9 1805 aa33.85■■■■□ 3.01
TRADD-204ENST00000566104 NPM1P06748 294 aaKnown RBP eCLIP33.83■■■■□ 3.01
TRADD-204ENST00000566104 MAPKBP1O60336 1514 aa33.83■■■■□ 3.01
TRADD-204ENST00000566104 TNIKQ9UKE5 1360 aa33.82■■■■□ 3
TRADD-204ENST00000566104 PTPRGP23470 1445 aa33.81■■■■□ 3
TRADD-204ENST00000566104 UGGT2Q9NYU1 1516 aa33.8■■■■□ 3
TRADD-204ENST00000566104 DISP1Q96F81 1524 aa33.76■■■■□ 3
TRADD-204ENST00000566104 PRXQ9BXM0 1461 aa33.75■■■□□ 2.99
TRADD-204ENST00000566104 KIAA0556O60303 1618 aa33.71■■■□□ 2.99
TRADD-204ENST00000566104 ABCC10Q5T3U5 1492 aa33.69■■■□□ 2.98
TRADD-204ENST00000566104 DIP2BQ9P265 1576 aa33.67■■■□□ 2.98
TRADD-204ENST00000566104 TTBK1Q5TCY1 1321 aaPredicted RBP33.65■■■□□ 2.98
TRADD-204ENST00000566104 ABCC2Q92887 1545 aa33.63■■■□□ 2.97
TRADD-204ENST00000566104 UHRF1BP1LA0JNW5 1464 aa33.63■■■□□ 2.97
TRADD-204ENST00000566104 EEA1Q15075 1411 aa33.61■■■□□ 2.97
TRADD-204ENST00000566104 GOLGA3Q08378 1498 aa33.6■■■□□ 2.97
TRADD-204ENST00000566104 UACAQ9BZF9 1416 aa33.6■■■□□ 2.97
TRADD-204ENST00000566104 FAM69CQ0P6D2 419 aa33.56■■■□□ 2.96
TRADD-204ENST00000566104 CSRNP3Q8WYN3 585 aa33.52■■■□□ 2.96
TRADD-204ENST00000566104 PLB1Q6P1J6 1458 aa33.47■■■□□ 2.95
TRADD-204ENST00000566104 KDM5BQ9UGL1 1544 aa33.46■■■□□ 2.95
TRADD-204ENST00000566104 ASXL2Q76L83 1435 aa33.45■■■□□ 2.94
TRADD-204ENST00000566104 ZCCHC11Q5TAX3 1644 aaKnown RBP33.44■■■□□ 2.94
TRADD-204ENST00000566104 TSPOAP1O95153 1857 aa33.44■■■□□ 2.94
TRADD-204ENST00000566104 GLI2P10070 1586 aa33.38■■■□□ 2.93
TRADD-204ENST00000566104 ABCA8O94911 1581 aa33.35■■■□□ 2.93
TRADD-204ENST00000566104 KIF21BO75037 1637 aa33.32■■■□□ 2.92
TRADD-204ENST00000566104 SAMD9Q5K651 1589 aa33.31■■■□□ 2.92
TRADD-204ENST00000566104 KDM6BO15054 1643 aa33.29■■■□□ 2.92
TRADD-204ENST00000566104 FAM9AQ8IZU1 332 aaPredicted RBP33.28■■■□□ 2.92
TRADD-204ENST00000566104 EPRSP07814 1512 aaKnown RBP33.25■■■□□ 2.91
TRADD-204ENST00000566104 MAP3K4Q9Y6R4 1608 aa33.23■■■□□ 2.91
TRADD-204ENST00000566104 WDR7Q9Y4E6 1490 aa33.23■■■□□ 2.91
TRADD-204ENST00000566104 PPRC1Q5VV67 1664 aaKnown RBP33.23■■■□□ 2.91
TRADD-204ENST00000566104 CHIC1Q5VXU3 224 aa33.2■■■□□ 2.91
TRADD-204ENST00000566104 P3H3Q8IVL6 736 aa33.14■■■□□ 2.9
TRADD-204ENST00000566104 RAPGEF6Q8TEU7 1601 aa33.12■■■□□ 2.89
TRADD-204ENST00000566104 TEX14Q8IWB6 1497 aa33.12■■■□□ 2.89
TRADD-204ENST00000566104 EFCAB5A4FU69 1503 aa33.1■■■□□ 2.89
TRADD-204ENST00000566104 CFAP43Q8NDM7 1665 aa33.1■■■□□ 2.89
TRADD-204ENST00000566104 AEBP2Q6ZN18 517 aaPredicted RBP33.02■■■□□ 2.88
TRADD-204ENST00000566104 ATP10BO94823 1461 aa33.01■■■□□ 2.88
TRADD-204ENST00000566104 FHOD3Q2V2M9 1422 aa33.01■■■□□ 2.87
TRADD-204ENST00000566104 RANGAP1P46060 587 aaPredicted RBP33■■■□□ 2.87
TRADD-204ENST00000566104 MAGI3Q5TCQ9 1506 aa32.94■■■□□ 2.86
TRADD-204ENST00000566104 CD109Q6YHK3 1445 aa32.94■■■□□ 2.86
TRADD-204ENST00000566104 KCNH8Q96L42 1107 aa32.93■■■□□ 2.86
TRADD-204ENST00000566104 ARID3CA6NKF2 412 aa32.92■■■□□ 2.86
TRADD-204ENST00000566104 NUP153P49790 1475 aaKnown RBP32.92■■■□□ 2.86
TRADD-204ENST00000566104 UBTFP17480 764 aaKnown RBP32.91■■■□□ 2.86
TRADD-204ENST00000566104 ABCA9Q8IUA7 1624 aa32.87■■■□□ 2.85
TRADD-204ENST00000566104 COL17A1Q9UMD9 1497 aaPredicted RBP32.83■■■□□ 2.85
TRADD-204ENST00000566104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.82■■■□□ 2.84
TRADD-204ENST00000566104 HNRNPUL2Q1KMD3 747 aaKnown RBP32.82■■■□□ 2.84
TRADD-204ENST00000566104 EHMT2Q96KQ7 1210 aa32.82■■■□□ 2.84
TRADD-204ENST00000566104 FMN1Q68DA7 1419 aa32.76■■■□□ 2.83
TRADD-204ENST00000566104 ARHGAP35Q9NRY4 1499 aa32.74■■■□□ 2.83
TRADD-204ENST00000566104 HECW1Q76N89 1606 aa32.72■■■□□ 2.83
TRADD-204ENST00000566104 ARAP3Q8WWN8 1544 aa32.67■■■□□ 2.82
TRADD-204ENST00000566104 PLEKHD1A6NEE1 506 aa32.67■■■□□ 2.82
TRADD-204ENST00000566104 PHLDB1Q86UU1 1377 aa32.67■■■□□ 2.82
TRADD-204ENST00000566104 CDK13Q14004 1512 aaKnown RBP32.64■■■□□ 2.82
TRADD-204ENST00000566104 NEO1Q92859 1461 aa32.63■■■□□ 2.81
TRADD-204ENST00000566104 CFAP74Q9C0B2 1584 aa32.58■■■□□ 2.81
TRADD-204ENST00000566104 KDM4FA0A1W2PPD8 638 aa32.58■■■□□ 2.81
TRADD-204ENST00000566104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.56■■■□□ 2.82e-6■■■■■ 51.7
TRADD-204ENST00000566104 ADGRL1O94910 1474 aa32.55■■■□□ 2.8
TRADD-204ENST00000566104 TTC37Q6PGP7 1564 aa32.54■■■□□ 2.8
TRADD-204ENST00000566104 ATP1B4Q9UN42 357 aaPredicted RBP32.51■■■□□ 2.79
TRADD-204ENST00000566104 LRRIQ1Q96JM4 1722 aa32.48■■■□□ 2.79
TRADD-204ENST00000566104 CDK11AQ9UQ88 783 aaPredicted RBP32.47■■■□□ 2.79
TRADD-204ENST00000566104 FANCAO15360 1455 aa32.46■■■□□ 2.79
TRADD-204ENST00000566104 PCF11O94913 1555 aaKnown RBP32.45■■■□□ 2.78
TRADD-204ENST00000566104 FRMPD1Q5SYB0 1578 aa32.44■■■□□ 2.78
TRADD-204ENST00000566104 KIF14Q15058 1648 aa32.44■■■□□ 2.78
TRADD-204ENST00000566104 MYO5CQ9NQX4 1742 aa32.43■■■□□ 2.78
TRADD-204ENST00000566104 CCDC18Q5T9S5 1454 aa32.41■■■□□ 2.78
TRADD-204ENST00000566104 RICTORQ6R327 1708 aa32.4■■■□□ 2.78
TRADD-204ENST00000566104 CASKIN1Q8WXD9 1431 aa32.4■■■□□ 2.78
TRADD-204ENST00000566104 CLIP1P30622 1438 aa32.39■■■□□ 2.78
TRADD-204ENST00000566104 AKNAQ7Z591 1439 aa32.39■■■□□ 2.78
TRADD-204ENST00000566104 DENND4BO75064 1496 aaPredicted RBP32.37■■■□□ 2.77
TRADD-204ENST00000566104 TROQ12816 1431 aaPredicted RBP32.37■■■□□ 2.77
TRADD-204ENST00000566104 RAPGEF3O95398 923 aa32.36■■■□□ 2.77
TRADD-204ENST00000566104 FYCO1Q9BQS8 1478 aa32.35■■■□□ 2.77
TRADD-204ENST00000566104 PLCH2O75038 1416 aa32.34■■■□□ 2.77
TRADD-204ENST00000566104 ARHGEF40Q8TER5 1519 aa32.3■■■□□ 2.76
TRADD-204ENST00000566104 ZMYM4Q5VZL5 1548 aa32.28■■■□□ 2.76
TRADD-204ENST00000566104 ARHGAP5Q13017 1502 aa32.21■■■□□ 2.75
TRADD-204ENST00000566104 POGZQ7Z3K3 1410 aa32.19■■■□□ 2.74
TRADD-204ENST00000566104 EFCAB2Q5VUJ9 269 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms