RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
RNF40-208ENST00000565995 MAPKBP1O60336 1514 aa22.91■■□□□ 1.26
RNF40-208ENST00000565995 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.25
RNF40-208ENST00000565995 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
RNF40-208ENST00000565995 DIP2BQ9P265 1576 aa22.85■■□□□ 1.25
RNF40-208ENST00000565995 CUL7Q14999 1698 aa22.81■■□□□ 1.24
RNF40-208ENST00000565995 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
RNF40-208ENST00000565995 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
RNF40-208ENST00000565995 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
RNF40-208ENST00000565995 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
RNF40-208ENST00000565995 IGF1RP08069 1367 aa22.75■■□□□ 1.23
RNF40-208ENST00000565995 KDM6BO15054 1643 aa22.71■■□□□ 1.23
RNF40-208ENST00000565995 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
RNF40-208ENST00000565995 PPRC1Q5VV67 1664 aaKnown RBP22.6■■□□□ 1.21
RNF40-208ENST00000565995 PTPRGP23470 1445 aa22.59■■□□□ 1.21
RNF40-208ENST00000565995 GLI2P10070 1586 aa22.59■■□□□ 1.21
RNF40-208ENST00000565995 KDM4FA0A1W2PPD8 638 aa22.58■■□□□ 1.21
RNF40-208ENST00000565995 ABCC2Q92887 1545 aa22.57■■□□□ 1.2
RNF40-208ENST00000565995 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
RNF40-208ENST00000565995 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
RNF40-208ENST00000565995 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
RNF40-208ENST00000565995 CARMIL2Q6F5E8 1435 aa22.54■■□□□ 1.2
RNF40-208ENST00000565995 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
RNF40-208ENST00000565995 PLB1Q6P1J6 1458 aa22.51■■□□□ 1.19
RNF40-208ENST00000565995 ASXL2Q76L83 1435 aa22.48■■□□□ 1.19
RNF40-208ENST00000565995 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
RNF40-208ENST00000565995 DISP1Q96F81 1524 aa22.46■■□□□ 1.19
RNF40-208ENST00000565995 KDM5BQ9UGL1 1544 aa22.43■■□□□ 1.18
RNF40-208ENST00000565995 UACAQ9BZF9 1416 aa22.43■■□□□ 1.18
RNF40-208ENST00000565995 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
RNF40-208ENST00000565995 ZCCHC11Q5TAX3 1644 aaKnown RBP22.4■■□□□ 1.18
RNF40-208ENST00000565995 EPRSP07814 1512 aaKnown RBP22.38■■□□□ 1.17
RNF40-208ENST00000565995 KIAA0556O60303 1618 aa22.35■■□□□ 1.17
RNF40-208ENST00000565995 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
RNF40-208ENST00000565995 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
RNF40-208ENST00000565995 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
RNF40-208ENST00000565995 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
RNF40-208ENST00000565995 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
RNF40-208ENST00000565995 TEX14Q8IWB6 1497 aa22.32■■□□□ 1.16
RNF40-208ENST00000565995 CFAP43Q8NDM7 1665 aa22.26■■□□□ 1.15
RNF40-208ENST00000565995 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
RNF40-208ENST00000565995 ABCA8O94911 1581 aa22.19■■□□□ 1.14
RNF40-208ENST00000565995 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
RNF40-208ENST00000565995 ILDR1Q86SU0 546 aaPredicted RBP22.17■■□□□ 1.14
RNF40-208ENST00000565995 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
RNF40-208ENST00000565995 HECW2Q9P2P5 1572 aa22.15■■□□□ 1.14
RNF40-208ENST00000565995 CD109Q6YHK3 1445 aa22.11■■□□□ 1.13
RNF40-208ENST00000565995 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
RNF40-208ENST00000565995 ARAP3Q8WWN8 1544 aa22.04■■□□□ 1.12
RNF40-208ENST00000565995 KIF21BO75037 1637 aa22.03■■□□□ 1.12
RNF40-208ENST00000565995 ABCA9Q8IUA7 1624 aa22■■□□□ 1.11
RNF40-208ENST00000565995 KCNH8Q96L42 1107 aa22■■□□□ 1.11
RNF40-208ENST00000565995 ATP10BO94823 1461 aa21.96■■□□□ 1.11
RNF40-208ENST00000565995 PHLDB1Q86UU1 1377 aa21.95■■□□□ 1.1
RNF40-208ENST00000565995 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
RNF40-208ENST00000565995 SAMD9Q5K651 1589 aa21.93■■□□□ 1.1
RNF40-208ENST00000565995 RAPGEF6Q8TEU7 1601 aa21.88■■□□□ 1.09
RNF40-208ENST00000565995 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
RNF40-208ENST00000565995 NEO1Q92859 1461 aa21.85■■□□□ 1.09
RNF40-208ENST00000565995 BCORL1Q5H9F3 1711 aa21.85■■□□□ 1.09
RNF40-208ENST00000565995 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
RNF40-208ENST00000565995 PTPRMP28827 1452 aa21.81■■□□□ 1.08
RNF40-208ENST00000565995 RICTORQ6R327 1708 aa21.79■■□□□ 1.08
RNF40-208ENST00000565995 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
RNF40-208ENST00000565995 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
RNF40-208ENST00000565995 MADDQ8WXG6 1647 aa21.75■■□□□ 1.07
RNF40-208ENST00000565995 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
RNF40-208ENST00000565995 ARID3CA6NKF2 412 aa21.74■■□□□ 1.07
RNF40-208ENST00000565995 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
RNF40-208ENST00000565995 CFAP74Q9C0B2 1584 aa21.71■■□□□ 1.07
RNF40-208ENST00000565995 FBXO41Q8TF61 875 aa21.71■■□□□ 1.07
RNF40-208ENST00000565995 ARHGEF40Q8TER5 1519 aa21.7■■□□□ 1.06
RNF40-208ENST00000565995 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
RNF40-208ENST00000565995 RIMS1Q86UR5 1692 aaKnown RBP21.68■■□□□ 1.06
RNF40-208ENST00000565995 LMTK3Q96Q04 1460 aa21.65■■□□□ 1.06
RNF40-208ENST00000565995 FHOD3Q2V2M9 1422 aa21.65■■□□□ 1.06
RNF40-208ENST00000565995 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
RNF40-208ENST00000565995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
RNF40-208ENST00000565995 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.06
RNF40-208ENST00000565995 EEA1Q15075 1411 aa21.64■■□□□ 1.06
RNF40-208ENST00000565995 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
RNF40-208ENST00000565995 SIGLEC1Q9BZZ2 1709 aa21.63■■□□□ 1.05
RNF40-208ENST00000565995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.63■■□□□ 1.05
RNF40-208ENST00000565995 HNRNPUL2Q1KMD3 747 aaKnown RBP21.63■■□□□ 1.05
RNF40-208ENST00000565995 PLEKHD1A6NEE1 506 aa21.62■■□□□ 1.05
RNF40-208ENST00000565995 FANCAO15360 1455 aa21.61■■□□□ 1.05
RNF40-208ENST00000565995 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
RNF40-208ENST00000565995 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
RNF40-208ENST00000565995 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.05
RNF40-208ENST00000565995 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.04
RNF40-208ENST00000565995 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
RNF40-208ENST00000565995 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
RNF40-208ENST00000565995 POGZQ7Z3K3 1410 aa21.54■■□□□ 1.04
RNF40-208ENST00000565995 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
RNF40-208ENST00000565995 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.03
RNF40-208ENST00000565995 YEATS2Q9ULM3 1422 aa21.49■■□□□ 1.03
RNF40-208ENST00000565995 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
RNF40-208ENST00000565995 PLCH2O75038 1416 aa21.48■■□□□ 1.03
RNF40-208ENST00000565995 CDK13Q14004 1512 aaKnown RBP21.46■■□□□ 1.03
RNF40-208ENST00000565995 PREX1Q8TCU6 1659 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms