RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
USB1-211ENST00000565662 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
USB1-211ENST00000565662 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
USB1-211ENST00000565662 TRHP20396 242 aaPredicted RBP28.47■■■□□ 2.15
USB1-211ENST00000565662 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
USB1-211ENST00000565662 IQGAP2Q13576 1575 aa28.43■■■□□ 2.14
USB1-211ENST00000565662 CARMIL2Q6F5E8 1435 aa28.4■■■□□ 2.14
USB1-211ENST00000565662 CTTNBP2Q8WZ74 1663 aa28.28■■■□□ 2.12
USB1-211ENST00000565662 EEA1Q15075 1411 aa28.26■■■□□ 2.12
USB1-211ENST00000565662 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.11
USB1-211ENST00000565662 UGGT2Q9NYU1 1516 aa28.26■■■□□ 2.11
USB1-211ENST00000565662 TNIKQ9UKE5 1360 aa28.25■■■□□ 2.11
USB1-211ENST00000565662 MAPKBP1O60336 1514 aa28.24■■■□□ 2.11
USB1-211ENST00000565662 PRXQ9BXM0 1461 aa28.22■■■□□ 2.11
USB1-211ENST00000565662 PTPRGP23470 1445 aa28.22■■■□□ 2.11
USB1-211ENST00000565662 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
USB1-211ENST00000565662 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
USB1-211ENST00000565662 DISP1Q96F81 1524 aa28.14■■■□□ 2.1
USB1-211ENST00000565662 KIAA0556O60303 1618 aa28.14■■■□□ 2.09
USB1-211ENST00000565662 UHRF1BP1LA0JNW5 1464 aa28.12■■■□□ 2.09
USB1-211ENST00000565662 KIF13AQ9H1H9 1805 aa28.1■■■□□ 2.09
USB1-211ENST00000565662 ABCC2Q92887 1545 aa28.08■■■□□ 2.09
USB1-211ENST00000565662 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
USB1-211ENST00000565662 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
USB1-211ENST00000565662 UACAQ9BZF9 1416 aa28.05■■■□□ 2.08
USB1-211ENST00000565662 DIP2BQ9P265 1576 aa28.03■■■□□ 2.08
USB1-211ENST00000565662 FAM9AQ8IZU1 332 aaPredicted RBP28.01■■■□□ 2.07
USB1-211ENST00000565662 PLB1Q6P1J6 1458 aa27.98■■■□□ 2.07
USB1-211ENST00000565662 KDM5BQ9UGL1 1544 aa27.94■■■□□ 2.06
USB1-211ENST00000565662 FAM69CQ0P6D2 419 aa27.92■■■□□ 2.06
USB1-211ENST00000565662 KIF21BO75037 1637 aa27.91■■■□□ 2.06
USB1-211ENST00000565662 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
USB1-211ENST00000565662 GLI2P10070 1586 aa27.87■■■□□ 2.05
USB1-211ENST00000565662 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
USB1-211ENST00000565662 ZCCHC11Q5TAX3 1644 aaKnown RBP27.85■■■□□ 2.05
USB1-211ENST00000565662 SAMD9Q5K651 1589 aa27.84■■■□□ 2.05
USB1-211ENST00000565662 ABCA8O94911 1581 aa27.83■■■□□ 2.05
USB1-211ENST00000565662 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
USB1-211ENST00000565662 EFCAB5A4FU69 1503 aa27.76■■■□□ 2.03
USB1-211ENST00000565662 WDR7Q9Y4E6 1490 aa27.74■■■□□ 2.03
USB1-211ENST00000565662 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
USB1-211ENST00000565662 KDM6BO15054 1643 aa27.7■■■□□ 2.03
USB1-211ENST00000565662 TSPOAP1O95153 1857 aa27.7■■■□□ 2.03
USB1-211ENST00000565662 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.02
USB1-211ENST00000565662 MAP3K4Q9Y6R4 1608 aa27.68■■■□□ 2.02
USB1-211ENST00000565662 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
USB1-211ENST00000565662 CFAP43Q8NDM7 1665 aa27.63■■■□□ 2.01
USB1-211ENST00000565662 PPRC1Q5VV67 1664 aaKnown RBP27.6■■■□□ 2.01
USB1-211ENST00000565662 P3H3Q8IVL6 736 aa27.54■■■□□ 2
USB1-211ENST00000565662 MAGI3Q5TCQ9 1506 aa27.51■■■□□ 2
USB1-211ENST00000565662 ATP10BO94823 1461 aa27.51■■■□□ 2
USB1-211ENST00000565662 FHOD3Q2V2M9 1422 aa27.51■■□□□ 1.99
USB1-211ENST00000565662 UBTFP17480 764 aaKnown RBP27.51■■□□□ 1.99
USB1-211ENST00000565662 CD109Q6YHK3 1445 aa27.48■■□□□ 1.99
USB1-211ENST00000565662 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
USB1-211ENST00000565662 NUP153P49790 1475 aaKnown RBP27.46■■□□□ 1.99
USB1-211ENST00000565662 ABCA9Q8IUA7 1624 aa27.43■■□□□ 1.98
USB1-211ENST00000565662 PHLDB1Q86UU1 1377 aa27.4■■□□□ 1.98
USB1-211ENST00000565662 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
USB1-211ENST00000565662 RANGAP1P46060 587 aaPredicted RBP27.39■■□□□ 1.98
USB1-211ENST00000565662 HECW1Q76N89 1606 aa27.38■■□□□ 1.97
USB1-211ENST00000565662 KCNH8Q96L42 1107 aa27.38■■□□□ 1.97
USB1-211ENST00000565662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
USB1-211ENST00000565662 HNRNPUL2Q1KMD3 747 aaKnown RBP27.37■■□□□ 1.97
USB1-211ENST00000565662 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
USB1-211ENST00000565662 PLEKHD1A6NEE1 506 aa27.32■■□□□ 1.96
USB1-211ENST00000565662 NEO1Q92859 1461 aa27.29■■□□□ 1.96
USB1-211ENST00000565662 CFAP74Q9C0B2 1584 aa27.28■■□□□ 1.96
USB1-211ENST00000565662 ARAP3Q8WWN8 1544 aa27.28■■□□□ 1.96
USB1-211ENST00000565662 ARID3CA6NKF2 412 aa27.28■■□□□ 1.96
USB1-211ENST00000565662 CDK11AQ9UQ88 783 aaPredicted RBP27.25■■□□□ 1.95
USB1-211ENST00000565662 COL17A1Q9UMD9 1497 aaPredicted RBP27.24■■□□□ 1.95
USB1-211ENST00000565662 EHMT2Q96KQ7 1210 aa27.19■■□□□ 1.94
USB1-211ENST00000565662 CCDC18Q5T9S5 1454 aa27.19■■□□□ 1.94
USB1-211ENST00000565662 CDK13Q14004 1512 aaKnown RBP27.17■■□□□ 1.94
USB1-211ENST00000565662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.15■■□□□ 1.94
USB1-211ENST00000565662 CLIP1P30622 1438 aa27.15■■□□□ 1.94
USB1-211ENST00000565662 CASKIN1Q8WXD9 1431 aa27.13■■□□□ 1.93
USB1-211ENST00000565662 KIF14Q15058 1648 aa27.12■■□□□ 1.93
USB1-211ENST00000565662 FYCO1Q9BQS8 1478 aa27.12■■□□□ 1.93
USB1-211ENST00000565662 TTC37Q6PGP7 1564 aa27.09■■□□□ 1.93
USB1-211ENST00000565662 FANCAO15360 1455 aa27.09■■□□□ 1.93
USB1-211ENST00000565662 ATP1B4Q9UN42 357 aaPredicted RBP27.08■■□□□ 1.93
USB1-211ENST00000565662 PCF11O94913 1555 aaKnown RBP27.08■■□□□ 1.93
USB1-211ENST00000565662 TROQ12816 1431 aaPredicted RBP27.07■■□□□ 1.92
USB1-211ENST00000565662 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
USB1-211ENST00000565662 ADGRL1O94910 1474 aa27.05■■□□□ 1.92
USB1-211ENST00000565662 DENND4BO75064 1496 aaPredicted RBP27.03■■□□□ 1.92
USB1-211ENST00000565662 AKNAQ7Z591 1439 aa27.03■■□□□ 1.92
USB1-211ENST00000565662 PLCH2O75038 1416 aa27.02■■□□□ 1.92
USB1-211ENST00000565662 LRRIQ1Q96JM4 1722 aa27.01■■□□□ 1.91
USB1-211ENST00000565662 KDM4FA0A1W2PPD8 638 aa27■■□□□ 1.91
USB1-211ENST00000565662 RICTORQ6R327 1708 aa26.99■■□□□ 1.91
USB1-211ENST00000565662 FRMPD1Q5SYB0 1578 aa26.98■■□□□ 1.91
USB1-211ENST00000565662 ZMYM4Q5VZL5 1548 aa26.96■■□□□ 1.91
USB1-211ENST00000565662 MAGI2Q86UL8 1455 aa26.95■■□□□ 1.91
USB1-211ENST00000565662 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.9
USB1-211ENST00000565662 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
USB1-211ENST00000565662 RAPGEF3O95398 923 aa26.89■■□□□ 1.9
USB1-211ENST00000565662 ARHGAP5Q13017 1502 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms