RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 JPH4Q96JJ6 628 aa31.15■■■□□ 2.58
SYNGR3-204ENST00000564642 ERCC6L2Q5T890 1561 aa31.14■■■□□ 2.58
SYNGR3-204ENST00000564642 RUSC2Q8N2Y8 1516 aa31.13■■■□□ 2.57
SYNGR3-204ENST00000564642 PRG4Q92954 1404 aaPredicted RBP31.08■■■□□ 2.57
SYNGR3-204ENST00000564642 KIAA0586Q9BVV6 1533 aa31.07■■■□□ 2.56
SYNGR3-204ENST00000564642 RAPGEF2Q9Y4G8 1499 aa30.99■■■□□ 2.55
SYNGR3-204ENST00000564642 IQGAP2Q13576 1575 aa30.87■■■□□ 2.53
SYNGR3-204ENST00000564642 CARMIL2Q6F5E8 1435 aa30.79■■■□□ 2.52
SYNGR3-204ENST00000564642 PRXQ9BXM0 1461 aa30.77■■■□□ 2.52
SYNGR3-204ENST00000564642 CSRNP3Q8WYN3 585 aa30.76■■■□□ 2.51
SYNGR3-204ENST00000564642 CTTNBP2Q8WZ74 1663 aa30.72■■■□□ 2.51
SYNGR3-204ENST00000564642 EEA1Q15075 1411 aa30.72■■■□□ 2.51
SYNGR3-204ENST00000564642 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
SYNGR3-204ENST00000564642 TTBK1Q5TCY1 1321 aaPredicted RBP30.7■■■□□ 2.5
SYNGR3-204ENST00000564642 PTPRGP23470 1445 aa30.69■■■□□ 2.5
SYNGR3-204ENST00000564642 TNIKQ9UKE5 1360 aa30.68■■■□□ 2.5
SYNGR3-204ENST00000564642 NPM1P06748 294 aaKnown RBP eCLIP30.68■■■□□ 2.5
SYNGR3-204ENST00000564642 UGGT2Q9NYU1 1516 aa30.67■■■□□ 2.5
SYNGR3-204ENST00000564642 DISP1Q96F81 1524 aa30.63■■■□□ 2.49
SYNGR3-204ENST00000564642 FAM9AQ8IZU1 332 aaPredicted RBP30.63■■■□□ 2.49
SYNGR3-204ENST00000564642 ADCY10Q96PN6 1610 aa30.62■■■□□ 2.49
SYNGR3-204ENST00000564642 ILDR1Q86SU0 546 aaPredicted RBP30.6■■■□□ 2.49
SYNGR3-204ENST00000564642 KIAA0556O60303 1618 aa30.56■■■□□ 2.48
SYNGR3-204ENST00000564642 GOLGA3Q08378 1498 aa30.52■■■□□ 2.48
SYNGR3-204ENST00000564642 MAPKBP1O60336 1514 aa30.47■■■□□ 2.47
SYNGR3-204ENST00000564642 UACAQ9BZF9 1416 aa30.47■■■□□ 2.47
SYNGR3-204ENST00000564642 UHRF1BP1LA0JNW5 1464 aa30.43■■■□□ 2.46
SYNGR3-204ENST00000564642 KIF13AQ9H1H9 1805 aa30.43■■■□□ 2.46
SYNGR3-204ENST00000564642 ABCC2Q92887 1545 aa30.42■■■□□ 2.46
SYNGR3-204ENST00000564642 KIF21BO75037 1637 aa30.4■■■□□ 2.46
SYNGR3-204ENST00000564642 FAM69CQ0P6D2 419 aa30.38■■■□□ 2.45
SYNGR3-204ENST00000564642 ABCC10Q5T3U5 1492 aa30.38■■■□□ 2.45
SYNGR3-204ENST00000564642 P3H3Q8IVL6 736 aa30.34■■■□□ 2.45
SYNGR3-204ENST00000564642 DIP2BQ9P265 1576 aa30.3■■■□□ 2.44
SYNGR3-204ENST00000564642 RANGAP1P46060 587 aaPredicted RBP30.3■■■□□ 2.44
SYNGR3-204ENST00000564642 PLB1Q6P1J6 1458 aa30.29■■■□□ 2.44
SYNGR3-204ENST00000564642 KDM5BQ9UGL1 1544 aa30.28■■■□□ 2.44
SYNGR3-204ENST00000564642 EHMT2Q96KQ7 1210 aa30.28■■■□□ 2.44
SYNGR3-204ENST00000564642 SAMD9Q5K651 1589 aa30.26■■■□□ 2.43
SYNGR3-204ENST00000564642 ASXL2Q76L83 1435 aa30.26■■■□□ 2.43
SYNGR3-204ENST00000564642 ZCCHC11Q5TAX3 1644 aaKnown RBP30.25■■■□□ 2.43
SYNGR3-204ENST00000564642 UBTFP17480 764 aaKnown RBP30.24■■■□□ 2.43
SYNGR3-204ENST00000564642 ABCA8O94911 1581 aa30.24■■■□□ 2.43
SYNGR3-204ENST00000564642 TSPOAP1O95153 1857 aa30.15■■■□□ 2.42
SYNGR3-204ENST00000564642 FHOD3Q2V2M9 1422 aa30.1■■■□□ 2.41
SYNGR3-204ENST00000564642 EFCAB5A4FU69 1503 aa30.1■■■□□ 2.41
SYNGR3-204ENST00000564642 GLI2P10070 1586 aa30.1■■■□□ 2.41
SYNGR3-204ENST00000564642 EPRSP07814 1512 aaKnown RBP30.07■■■□□ 2.4
SYNGR3-204ENST00000564642 RAPGEF6Q8TEU7 1601 aa30.06■■■□□ 2.4
SYNGR3-204ENST00000564642 WDR7Q9Y4E6 1490 aa30.06■■■□□ 2.4
SYNGR3-204ENST00000564642 ARID3CA6NKF2 412 aa30.05■■■□□ 2.4
SYNGR3-204ENST00000564642 ATP10BO94823 1461 aa30■■■□□ 2.39
SYNGR3-204ENST00000564642 KCNH8Q96L42 1107 aa30■■■□□ 2.39
SYNGR3-204ENST00000564642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
SYNGR3-204ENST00000564642 HNRNPUL2Q1KMD3 747 aaKnown RBP29.97■■■□□ 2.39
SYNGR3-204ENST00000564642 MAP3K4Q9Y6R4 1608 aa29.96■■■□□ 2.39
SYNGR3-204ENST00000564642 PPRC1Q5VV67 1664 aaKnown RBP29.93■■■□□ 2.38
SYNGR3-204ENST00000564642 KDM6BO15054 1643 aa29.93■■■□□ 2.38
SYNGR3-204ENST00000564642 NUP153P49790 1475 aaKnown RBP29.91■■■□□ 2.38
SYNGR3-204ENST00000564642 ARHGAP35Q9NRY4 1499 aa29.9■■■□□ 2.38
SYNGR3-204ENST00000564642 TEX14Q8IWB6 1497 aa29.87■■■□□ 2.37
SYNGR3-204ENST00000564642 KDM4FA0A1W2PPD8 638 aa29.87■■■□□ 2.37
SYNGR3-204ENST00000564642 CFAP43Q8NDM7 1665 aa29.86■■■□□ 2.37
SYNGR3-204ENST00000564642 FMN1Q68DA7 1419 aa29.85■■■□□ 2.37
SYNGR3-204ENST00000564642 CD109Q6YHK3 1445 aa29.85■■■□□ 2.37
SYNGR3-204ENST00000564642 ATP1B4Q9UN42 357 aaPredicted RBP29.81■■■□□ 2.36
SYNGR3-204ENST00000564642 PLEKHD1A6NEE1 506 aa29.8■■■□□ 2.36
SYNGR3-204ENST00000564642 MAGI3Q5TCQ9 1506 aa29.76■■■□□ 2.35
SYNGR3-204ENST00000564642 HECW1Q76N89 1606 aa29.73■■■□□ 2.35
SYNGR3-204ENST00000564642 ABCA9Q8IUA7 1624 aa29.72■■■□□ 2.35
SYNGR3-204ENST00000564642 CDK13Q14004 1512 aaKnown RBP29.7■■■□□ 2.34
SYNGR3-204ENST00000564642 CLIP1P30622 1438 aa29.67■■■□□ 2.34
SYNGR3-204ENST00000564642 COL17A1Q9UMD9 1497 aaPredicted RBP29.67■■■□□ 2.34
SYNGR3-204ENST00000564642 CDK11AQ9UQ88 783 aaPredicted RBP29.63■■■□□ 2.33
SYNGR3-204ENST00000564642 CASKIN1Q8WXD9 1431 aa29.56■■■□□ 2.32
SYNGR3-204ENST00000564642 PHLDB1Q86UU1 1377 aa29.55■■■□□ 2.32
SYNGR3-204ENST00000564642 LRRIQ1Q96JM4 1722 aa29.55■■■□□ 2.32
SYNGR3-204ENST00000564642 PCF11O94913 1555 aaKnown RBP29.55■■■□□ 2.32
SYNGR3-204ENST00000564642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.32
SYNGR3-204ENST00000564642 ARAP3Q8WWN8 1544 aa29.51■■■□□ 2.32
SYNGR3-204ENST00000564642 NEO1Q92859 1461 aa29.51■■■□□ 2.31
SYNGR3-204ENST00000564642 CCDC18Q5T9S5 1454 aa29.49■■■□□ 2.31
SYNGR3-204ENST00000564642 TTC37Q6PGP7 1564 aa29.49■■■□□ 2.31
SYNGR3-204ENST00000564642 LOC105371045A0A1W2PR82 267 aa29.48■■■□□ 2.31
SYNGR3-204ENST00000564642 FYCO1Q9BQS8 1478 aa29.48■■■□□ 2.31
SYNGR3-204ENST00000564642 TROQ12816 1431 aaPredicted RBP29.46■■■□□ 2.31
SYNGR3-204ENST00000564642 CEP162Q5TB80 1403 aa29.46■■■□□ 2.31
SYNGR3-204ENST00000564642 CFAP74Q9C0B2 1584 aa29.43■■■□□ 2.3
SYNGR3-204ENST00000564642 FANCAO15360 1455 aa29.42■■■□□ 2.3
SYNGR3-204ENST00000564642 KIF14Q15058 1648 aa29.42■■■□□ 2.3
SYNGR3-204ENST00000564642 AKNAQ7Z591 1439 aa29.39■■■□□ 2.3
SYNGR3-204ENST00000564642 RAPGEF3O95398 923 aa29.39■■■□□ 2.3
SYNGR3-204ENST00000564642 PLCH2O75038 1416 aa29.38■■■□□ 2.29
SYNGR3-204ENST00000564642 MYO5CQ9NQX4 1742 aa29.37■■■□□ 2.29
SYNGR3-204ENST00000564642 DENND4BO75064 1496 aaPredicted RBP29.32■■■□□ 2.28
SYNGR3-204ENST00000564642 EFCAB2Q5VUJ9 269 aa29.32■■■□□ 2.28
SYNGR3-204ENST00000564642 HECW2Q9P2P5 1572 aa29.29■■■□□ 2.28
SYNGR3-204ENST00000564642 FRMPD1Q5SYB0 1578 aa29.27■■■□□ 2.28
SYNGR3-204ENST00000564642 RICTORQ6R327 1708 aa29.26■■■□□ 2.27
SYNGR3-204ENST00000564642 ADGRL1O94910 1474 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms