RNA–Protein interactions for RNA: ENST00000564139.5

E4F1-204, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-204ENST00000564139 NEFLP07196 543 aa28.91■■■□□ 2.22
E4F1-204ENST00000564139 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
E4F1-204ENST00000564139 SIN3AQ96ST3 1273 aa28.9■■■□□ 2.22
E4F1-204ENST00000564139 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
E4F1-204ENST00000564139 TIMELESSQ9UNS1 1208 aa28.89■■■□□ 2.22
E4F1-204ENST00000564139 CCER2I3L3R5 266 aa28.87■■■□□ 2.21
E4F1-204ENST00000564139 PHLDB1Q86UU1 1377 aa28.87■■■□□ 2.21
E4F1-204ENST00000564139 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
E4F1-204ENST00000564139 RBM19Q9Y4C8 960 aaKnown RBP28.83■■■□□ 2.21
E4F1-204ENST00000564139 CFTRP13569 1480 aa28.82■■■□□ 2.2
E4F1-204ENST00000564139 IGF1RP08069 1367 aa28.79■■■□□ 2.2
E4F1-204ENST00000564139 BCL11AQ9H165 835 aa28.79■■■□□ 2.2
E4F1-204ENST00000564139 FAM50AQ14320 339 aaKnown RBP28.78■■■□□ 2.2
E4F1-204ENST00000564139 ANP32CO43423 234 aa28.77■■■□□ 2.2
E4F1-204ENST00000564139 CFAP43Q8NDM7 1665 aa28.76■■■□□ 2.19
E4F1-204ENST00000564139 TRIM52Q96A61 297 aa28.75■■■□□ 2.19
E4F1-204ENST00000564139 FHAD1B1AJZ9 1412 aa28.72■■■□□ 2.19
E4F1-204ENST00000564139 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
E4F1-204ENST00000564139 CARMIL1Q5VZK9 1371 aa28.69■■■□□ 2.18
E4F1-204ENST00000564139 PCF11O94913 1555 aaKnown RBP28.66■■■□□ 2.18
E4F1-204ENST00000564139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.178e-7■■■■□ 20
E4F1-204ENST00000564139 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
E4F1-204ENST00000564139 TONSLQ96HA7 1378 aa28.55■■■□□ 2.16
E4F1-204ENST00000564139 FYCO1Q9BQS8 1478 aa28.52■■■□□ 2.16
E4F1-204ENST00000564139 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
E4F1-204ENST00000564139 MSH5O43196 834 aa28.49■■■□□ 2.15
E4F1-204ENST00000564139 P3H3Q8IVL6 736 aa28.48■■■□□ 2.15
E4F1-204ENST00000564139 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
E4F1-204ENST00000564139 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
E4F1-204ENST00000564139 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
E4F1-204ENST00000564139 FHOD3Q2V2M9 1422 aa28.45■■■□□ 2.15
E4F1-204ENST00000564139 FANCIQ9NVI1 1328 aa28.44■■■□□ 2.14
E4F1-204ENST00000564139 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.141e-6■■■■■ 73.8
E4F1-204ENST00000564139 FGD6Q6ZV73 1430 aa28.43■■■□□ 2.14
E4F1-204ENST00000564139 UACAQ9BZF9 1416 aa28.43■■■□□ 2.14
E4F1-204ENST00000564139 EFCAB5A4FU69 1503 aa28.42■■■□□ 2.14
E4F1-204ENST00000564139 HFM1A2PYH4 1435 aa28.39■■■□□ 2.14
E4F1-204ENST00000564139 HNRNPUQ00839 825 aaKnown RBP eCLIP28.39■■■□□ 2.14
E4F1-204ENST00000564139 CDK11AQ9UQ88 783 aaPredicted RBP28.38■■■□□ 2.13
E4F1-204ENST00000564139 PTPN23Q9H3S7 1636 aa28.36■■■□□ 2.13
E4F1-204ENST00000564139 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
E4F1-204ENST00000564139 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
E4F1-204ENST00000564139 PTPRKQ15262 1439 aa28.32■■■□□ 2.12
E4F1-204ENST00000564139 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
E4F1-204ENST00000564139 ERICH6BQ5W0A0 696 aa28.29■■■□□ 2.12
E4F1-204ENST00000564139 NAIPQ13075 1403 aa28.26■■■□□ 2.12
E4F1-204ENST00000564139 FMN1Q68DA7 1419 aa28.25■■■□□ 2.11
E4F1-204ENST00000564139 ERICH6Q7L0X2 663 aa28.24■■■□□ 2.11
E4F1-204ENST00000564139 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
E4F1-204ENST00000564139 MTUS2Q5JR59 1369 aa28.23■■■□□ 2.11
E4F1-204ENST00000564139 WASHC2AQ641Q2 1341 aa28.22■■■□□ 2.11
E4F1-204ENST00000564139 CTTNBP2Q8WZ74 1663 aa28.21■■■□□ 2.11
E4F1-204ENST00000564139 PPP4R2Q9NY27 417 aa28.19■■■□□ 2.1
E4F1-204ENST00000564139 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
E4F1-204ENST00000564139 HSPA5P11021 654 aaKnown RBP28.17■■■□□ 2.1
E4F1-204ENST00000564139 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
E4F1-204ENST00000564139 NCOA2Q15596 1464 aa28.17■■■□□ 2.1
E4F1-204ENST00000564139 CUL7Q14999 1698 aa28.16■■■□□ 2.1
E4F1-204ENST00000564139 MYOM3Q5VTT5 1437 aa28.16■■■□□ 2.1
E4F1-204ENST00000564139 CNTLNQ9NXG0 1405 aa28.13■■■□□ 2.09
E4F1-204ENST00000564139 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
E4F1-204ENST00000564139 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
E4F1-204ENST00000564139 FANCD2Q9BXW9 1451 aa28.09■■■□□ 2.09
E4F1-204ENST00000564139 EIF4G2P78344 907 aaKnown RBP eCLIP28.08■■■□□ 2.09
E4F1-204ENST00000564139 LRRIQ1Q96JM4 1722 aa28.07■■■□□ 2.08
E4F1-204ENST00000564139 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
E4F1-204ENST00000564139 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
E4F1-204ENST00000564139 CCDC184Q52MB2 194 aa28.06■■■□□ 2.08
E4F1-204ENST00000564139 HECW1Q76N89 1606 aa28.05■■■□□ 2.08
E4F1-204ENST00000564139 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
E4F1-204ENST00000564139 GRIN2BQ13224 1484 aa28.04■■■□□ 2.08
E4F1-204ENST00000564139 EHBP1L1Q8N3D4 1523 aa28.04■■■□□ 2.08
E4F1-204ENST00000564139 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
E4F1-204ENST00000564139 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
E4F1-204ENST00000564139 DENND4BO75064 1496 aaPredicted RBP28.03■■■□□ 2.08
E4F1-204ENST00000564139 GCC2Q8IWJ2 1684 aa28.01■■■□□ 2.07
E4F1-204ENST00000564139 ZBED9Q6R2W3 1325 aa28■■■□□ 2.07
E4F1-204ENST00000564139 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
E4F1-204ENST00000564139 UGGT2Q9NYU1 1516 aa28■■■□□ 2.07
E4F1-204ENST00000564139 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
E4F1-204ENST00000564139 NCOA1Q15788 1441 aa27.99■■■□□ 2.07
E4F1-204ENST00000564139 CCDC7Q96M83 1385 aa27.97■■■□□ 2.07
E4F1-204ENST00000564139 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
E4F1-204ENST00000564139 RRP7BPQ9NSQ0 103 aa27.97■■■□□ 2.07
E4F1-204ENST00000564139 B4GALNT3Q6L9W6 998 aa27.96■■■□□ 2.07
E4F1-204ENST00000564139 FAM9BQ8IZU0 186 aa27.95■■■□□ 2.07
E4F1-204ENST00000564139 AKNAQ7Z591 1439 aa27.95■■■□□ 2.06
E4F1-204ENST00000564139 TCOF1Q13428 1488 aaKnown RBP27.94■■■□□ 2.06
E4F1-204ENST00000564139 MRS2Q9HD23 443 aa27.94■■■□□ 2.06
E4F1-204ENST00000564139 C11orf95C9JLR9 678 aaPredicted RBP27.92■■■□□ 2.06
E4F1-204ENST00000564139 L3MBTL2Q969R5 705 aa27.9■■■□□ 2.06
E4F1-204ENST00000564139 CHIC2Q9UKJ5 165 aa27.89■■■□□ 2.06
E4F1-204ENST00000564139 KDM6BO15054 1643 aa27.89■■■□□ 2.05
E4F1-204ENST00000564139 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
E4F1-204ENST00000564139 MPHOSPH9Q99550 1183 aa27.86■■■□□ 2.05
E4F1-204ENST00000564139 DEKP35659 375 aaKnown RBP27.84■■■□□ 2.05
E4F1-204ENST00000564139 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.04
E4F1-204ENST00000564139 NOP58Q9Y2X3 529 aaKnown RBP27.81■■■□□ 2.04
E4F1-204ENST00000564139 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
E4F1-204ENST00000564139 SMG6Q86US8 1419 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms