RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
SNX29-203ENST00000564111 PRG4Q92954 1404 aaPredicted RBP25.32■■□□□ 1.64
SNX29-203ENST00000564111 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
SNX29-203ENST00000564111 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
SNX29-203ENST00000564111 IQGAP2Q13576 1575 aa25.22■■□□□ 1.63
SNX29-203ENST00000564111 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
SNX29-203ENST00000564111 CARMIL2Q6F5E8 1435 aa25.16■■□□□ 1.62
SNX29-203ENST00000564111 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
SNX29-203ENST00000564111 EEA1Q15075 1411 aa25.08■■□□□ 1.6
SNX29-203ENST00000564111 UGGT2Q9NYU1 1516 aa25.08■■□□□ 1.6
SNX29-203ENST00000564111 TNIKQ9UKE5 1360 aa25.04■■□□□ 1.6
SNX29-203ENST00000564111 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
SNX29-203ENST00000564111 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
SNX29-203ENST00000564111 PRXQ9BXM0 1461 aa25.03■■□□□ 1.6
SNX29-203ENST00000564111 NPM1P06748 294 aaKnown RBP eCLIP25.01■■□□□ 1.59
SNX29-203ENST00000564111 PTPRGP23470 1445 aa25■■□□□ 1.59
SNX29-203ENST00000564111 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
SNX29-203ENST00000564111 KIAA0556O60303 1618 aa24.97■■□□□ 1.59
SNX29-203ENST00000564111 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
SNX29-203ENST00000564111 UHRF1BP1LA0JNW5 1464 aa24.95■■□□□ 1.58
SNX29-203ENST00000564111 KIF13AQ9H1H9 1805 aa24.94■■□□□ 1.58
SNX29-203ENST00000564111 ABCC2Q92887 1545 aa24.88■■□□□ 1.57
SNX29-203ENST00000564111 ABCC10Q5T3U5 1492 aa24.87■■□□□ 1.57
SNX29-203ENST00000564111 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
SNX29-203ENST00000564111 UACAQ9BZF9 1416 aa24.85■■□□□ 1.57
SNX29-203ENST00000564111 DIP2BQ9P265 1576 aa24.85■■□□□ 1.57
SNX29-203ENST00000564111 KIF21BO75037 1637 aa24.81■■□□□ 1.56
SNX29-203ENST00000564111 PLB1Q6P1J6 1458 aa24.79■■□□□ 1.56
SNX29-203ENST00000564111 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
SNX29-203ENST00000564111 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
SNX29-203ENST00000564111 GLI2P10070 1586 aa24.73■■□□□ 1.55
SNX29-203ENST00000564111 ZCCHC11Q5TAX3 1644 aaKnown RBP24.73■■□□□ 1.55
SNX29-203ENST00000564111 SAMD9Q5K651 1589 aa24.73■■□□□ 1.55
SNX29-203ENST00000564111 ABCA8O94911 1581 aa24.71■■□□□ 1.55
SNX29-203ENST00000564111 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
SNX29-203ENST00000564111 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
SNX29-203ENST00000564111 TTBK1Q5TCY1 1321 aaPredicted RBP24.68■■□□□ 1.54
SNX29-203ENST00000564111 EFCAB5A4FU69 1503 aa24.64■■□□□ 1.53
SNX29-203ENST00000564111 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
SNX29-203ENST00000564111 TSPOAP1O95153 1857 aa24.58■■□□□ 1.53
SNX29-203ENST00000564111 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.53
SNX29-203ENST00000564111 EPRSP07814 1512 aaKnown RBP24.57■■□□□ 1.52
SNX29-203ENST00000564111 MAP3K4Q9Y6R4 1608 aa24.57■■□□□ 1.52
SNX29-203ENST00000564111 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
SNX29-203ENST00000564111 KDM6BO15054 1643 aa24.56■■□□□ 1.52
SNX29-203ENST00000564111 RAPGEF6Q8TEU7 1601 aa24.55■■□□□ 1.52
SNX29-203ENST00000564111 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
SNX29-203ENST00000564111 CFAP43Q8NDM7 1665 aa24.52■■□□□ 1.52
SNX29-203ENST00000564111 PPRC1Q5VV67 1664 aaKnown RBP24.51■■□□□ 1.51
SNX29-203ENST00000564111 ATP10BO94823 1461 aa24.4■■□□□ 1.5
SNX29-203ENST00000564111 P3H3Q8IVL6 736 aa24.4■■□□□ 1.5
SNX29-203ENST00000564111 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
SNX29-203ENST00000564111 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
SNX29-203ENST00000564111 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
SNX29-203ENST00000564111 ABCA9Q8IUA7 1624 aa24.35■■□□□ 1.49
SNX29-203ENST00000564111 NUP153P49790 1475 aaKnown RBP24.35■■□□□ 1.49
SNX29-203ENST00000564111 FMN1Q68DA7 1419 aa24.34■■□□□ 1.49
SNX29-203ENST00000564111 CD109Q6YHK3 1445 aa24.33■■□□□ 1.49
SNX29-203ENST00000564111 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
SNX29-203ENST00000564111 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
SNX29-203ENST00000564111 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
SNX29-203ENST00000564111 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
SNX29-203ENST00000564111 KCNH8Q96L42 1107 aa24.23■■□□□ 1.47
SNX29-203ENST00000564111 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
SNX29-203ENST00000564111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.21■■□□□ 1.47
SNX29-203ENST00000564111 HNRNPUL2Q1KMD3 747 aaKnown RBP24.21■■□□□ 1.47
SNX29-203ENST00000564111 NEO1Q92859 1461 aa24.19■■□□□ 1.46
SNX29-203ENST00000564111 ARAP3Q8WWN8 1544 aa24.19■■□□□ 1.46
SNX29-203ENST00000564111 PLEKHD1A6NEE1 506 aa24.18■■□□□ 1.46
SNX29-203ENST00000564111 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
SNX29-203ENST00000564111 COL17A1Q9UMD9 1497 aaPredicted RBP24.12■■□□□ 1.45
SNX29-203ENST00000564111 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
SNX29-203ENST00000564111 CCDC18Q5T9S5 1454 aa24.11■■□□□ 1.45
SNX29-203ENST00000564111 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
SNX29-203ENST00000564111 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
SNX29-203ENST00000564111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.08■■□□□ 1.45
SNX29-203ENST00000564111 CASKIN1Q8WXD9 1431 aa24.07■■□□□ 1.44
SNX29-203ENST00000564111 KIF14Q15058 1648 aa24.07■■□□□ 1.44
SNX29-203ENST00000564111 CLIP1P30622 1438 aa24.06■■□□□ 1.44
SNX29-203ENST00000564111 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
SNX29-203ENST00000564111 PCF11O94913 1555 aaKnown RBP24.05■■□□□ 1.44
SNX29-203ENST00000564111 TTC37Q6PGP7 1564 aa24.05■■□□□ 1.44
SNX29-203ENST00000564111 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
SNX29-203ENST00000564111 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.43
SNX29-203ENST00000564111 KDM4FA0A1W2PPD8 638 aa24.01■■□□□ 1.43
SNX29-203ENST00000564111 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
SNX29-203ENST00000564111 FANCAO15360 1455 aa23.99■■□□□ 1.43
SNX29-203ENST00000564111 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
SNX29-203ENST00000564111 ADGRL1O94910 1474 aa23.96■■□□□ 1.43
SNX29-203ENST00000564111 RICTORQ6R327 1708 aa23.96■■□□□ 1.43
SNX29-203ENST00000564111 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.43
SNX29-203ENST00000564111 AKNAQ7Z591 1439 aa23.95■■□□□ 1.43
SNX29-203ENST00000564111 FRMPD1Q5SYB0 1578 aa23.95■■□□□ 1.42
SNX29-203ENST00000564111 PLCH2O75038 1416 aa23.95■■□□□ 1.42
SNX29-203ENST00000564111 ZMYM4Q5VZL5 1548 aa23.93■■□□□ 1.42
SNX29-203ENST00000564111 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
SNX29-203ENST00000564111 MAGI2Q86UL8 1455 aa23.88■■□□□ 1.41
SNX29-203ENST00000564111 PREX2Q70Z35 1606 aa23.87■■□□□ 1.41
SNX29-203ENST00000564111 CEP162Q5TB80 1403 aa23.85■■□□□ 1.41
SNX29-203ENST00000564111 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms