RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
SNX29-203ENST00000564111 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
SNX29-203ENST00000564111 ABCC9O60706 1549 aa32.05■■■□□ 2.72
SNX29-203ENST00000564111 RB1CC1Q8TDY2 1594 aa30.97■■■□□ 2.55
SNX29-203ENST00000564111 NACADO15069 1562 aa30.87■■■□□ 2.53
SNX29-203ENST00000564111 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
SNX29-203ENST00000564111 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
SNX29-203ENST00000564111 DCAF1Q9Y4B6 1507 aa30.38■■■□□ 2.45
SNX29-203ENST00000564111 DCAF8L2P0C7V8 631 aa30.34■■■□□ 2.45
SNX29-203ENST00000564111 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
SNX29-203ENST00000564111 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
SNX29-203ENST00000564111 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
SNX29-203ENST00000564111 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.35
SNX29-203ENST00000564111 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
SNX29-203ENST00000564111 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
SNX29-203ENST00000564111 EIF4G1Q04637 1599 aaKnown RBP29.16■■■□□ 2.26
SNX29-203ENST00000564111 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
SNX29-203ENST00000564111 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
SNX29-203ENST00000564111 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
SNX29-203ENST00000564111 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
SNX29-203ENST00000564111 SMARCA2P51531 1590 aa28.4■■■□□ 2.14
SNX29-203ENST00000564111 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
SNX29-203ENST00000564111 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
SNX29-203ENST00000564111 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
SNX29-203ENST00000564111 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
SNX29-203ENST00000564111 BAZ1BQ9UIG0 1483 aaKnown RBP28.1■■■□□ 2.09
SNX29-203ENST00000564111 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
SNX29-203ENST00000564111 LAMC3Q9Y6N6 1575 aa27.78■■■□□ 2.04
SNX29-203ENST00000564111 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
SNX29-203ENST00000564111 WIZO95785 1651 aa27.77■■■□□ 2.04
SNX29-203ENST00000564111 CUX2O14529 1486 aa27.71■■■□□ 2.03
SNX29-203ENST00000564111 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
SNX29-203ENST00000564111 NESP48681 1621 aa27.61■■■□□ 2.01
SNX29-203ENST00000564111 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
SNX29-203ENST00000564111 DNAJC5Q9H3Z4 198 aa27.56■■■□□ 2
SNX29-203ENST00000564111 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
SNX29-203ENST00000564111 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
SNX29-203ENST00000564111 THOC2Q8NI27 1593 aaKnown RBP27.46■■□□□ 1.99
SNX29-203ENST00000564111 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.98
SNX29-203ENST00000564111 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
SNX29-203ENST00000564111 CFTRP13569 1480 aa27.29■■□□□ 1.96
SNX29-203ENST00000564111 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
SNX29-203ENST00000564111 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
SNX29-203ENST00000564111 WDR62O43379 1518 aa27.2■■□□□ 1.95
SNX29-203ENST00000564111 FANCD2Q9BXW9 1451 aa27.18■■□□□ 1.94
SNX29-203ENST00000564111 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
SNX29-203ENST00000564111 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.9
SNX29-203ENST00000564111 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
SNX29-203ENST00000564111 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
SNX29-203ENST00000564111 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
SNX29-203ENST00000564111 IFT140Q96RY7 1462 aa26.7■■□□□ 1.87
SNX29-203ENST00000564111 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
SNX29-203ENST00000564111 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
SNX29-203ENST00000564111 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
SNX29-203ENST00000564111 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
SNX29-203ENST00000564111 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
SNX29-203ENST00000564111 ZNF608Q9ULD9 1512 aaPredicted RBP26.41■■□□□ 1.82
SNX29-203ENST00000564111 CUX1P39880 1505 aa26.38■■□□□ 1.81
SNX29-203ENST00000564111 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
SNX29-203ENST00000564111 SOGA1O94964 1423 aa26.32■■□□□ 1.8
SNX29-203ENST00000564111 OSCARQ8IYS5 282 aa26.32■■□□□ 1.8
SNX29-203ENST00000564111 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
SNX29-203ENST00000564111 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
SNX29-203ENST00000564111 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
SNX29-203ENST00000564111 CHD1O14646 1710 aa26.2■■□□□ 1.78
SNX29-203ENST00000564111 TOP2BQ02880 1626 aa26.18■■□□□ 1.78
SNX29-203ENST00000564111 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
SNX29-203ENST00000564111 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.78
SNX29-203ENST00000564111 GRIN2BQ13224 1484 aa26.14■■□□□ 1.78
SNX29-203ENST00000564111 PBRM1Q86U86 1689 aa26.14■■□□□ 1.77
SNX29-203ENST00000564111 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
SNX29-203ENST00000564111 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
SNX29-203ENST00000564111 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
SNX29-203ENST00000564111 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
SNX29-203ENST00000564111 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
SNX29-203ENST00000564111 GAPVD1Q14C86 1478 aa26.06■■□□□ 1.76
SNX29-203ENST00000564111 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
SNX29-203ENST00000564111 SYNJ2O15056 1496 aa26.01■■□□□ 1.75
SNX29-203ENST00000564111 RIMBP3CA6NJZ7 1639 aa26■■□□□ 1.75
SNX29-203ENST00000564111 RIMBP3BA6NNM3 1639 aa26■■□□□ 1.75
SNX29-203ENST00000564111 RIMBP3Q9UFD9 1639 aa26■■□□□ 1.75
SNX29-203ENST00000564111 ARHGEF11O15085 1522 aa25.94■■□□□ 1.74
SNX29-203ENST00000564111 FBLN2P98095 1184 aa25.91■■□□□ 1.74
SNX29-203ENST00000564111 CLASP1Q7Z460 1538 aa25.91■■□□□ 1.74
SNX29-203ENST00000564111 CHMP7Q8WUX9 453 aaPredicted RBP25.9■■□□□ 1.74
SNX29-203ENST00000564111 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.74
SNX29-203ENST00000564111 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
SNX29-203ENST00000564111 FHAD1B1AJZ9 1412 aa25.78■■□□□ 1.72
SNX29-203ENST00000564111 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
SNX29-203ENST00000564111 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
SNX29-203ENST00000564111 NUP160Q12769 1436 aa25.68■■□□□ 1.7
SNX29-203ENST00000564111 CUL7Q14999 1698 aa25.67■■□□□ 1.7
SNX29-203ENST00000564111 KIF27Q86VH2 1401 aa25.65■■□□□ 1.7
SNX29-203ENST00000564111 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
SNX29-203ENST00000564111 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
SNX29-203ENST00000564111 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
SNX29-203ENST00000564111 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
SNX29-203ENST00000564111 IGF1RP08069 1367 aa25.45■■□□□ 1.67
SNX29-203ENST00000564111 KIAA0586Q9BVV6 1533 aa25.37■■□□□ 1.65
SNX29-203ENST00000564111 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms