RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 RUSC2Q8N2Y8 1516 aa27.17■■□□□ 1.94
SPSB3-205ENST00000564070 KIAA0586Q9BVV6 1533 aa27.08■■□□□ 1.93
SPSB3-205ENST00000564070 JPH4Q96JJ6 628 aa27.07■■□□□ 1.92
SPSB3-205ENST00000564070 PRG4Q92954 1404 aaPredicted RBP27.07■■□□□ 1.92
SPSB3-205ENST00000564070 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
SPSB3-205ENST00000564070 PRXQ9BXM0 1461 aa26.94■■□□□ 1.9
SPSB3-205ENST00000564070 EEA1Q15075 1411 aa26.94■■□□□ 1.9
SPSB3-205ENST00000564070 CHIC1Q5VXU3 224 aa26.93■■□□□ 1.9
SPSB3-205ENST00000564070 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
SPSB3-205ENST00000564070 CSRNP3Q8WYN3 585 aa26.86■■□□□ 1.89
SPSB3-205ENST00000564070 CTTNBP2Q8WZ74 1663 aa26.82■■□□□ 1.88
SPSB3-205ENST00000564070 CARMIL2Q6F5E8 1435 aa26.79■■□□□ 1.88
SPSB3-205ENST00000564070 UGGT2Q9NYU1 1516 aa26.78■■□□□ 1.88
SPSB3-205ENST00000564070 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.88
SPSB3-205ENST00000564070 ADCY10Q96PN6 1610 aa26.75■■□□□ 1.87
SPSB3-205ENST00000564070 DISP1Q96F81 1524 aa26.73■■□□□ 1.87
SPSB3-205ENST00000564070 TTBK1Q5TCY1 1321 aaPredicted RBP26.71■■□□□ 1.87
SPSB3-205ENST00000564070 NPM1P06748 294 aaKnown RBP eCLIP26.71■■□□□ 1.87
SPSB3-205ENST00000564070 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
SPSB3-205ENST00000564070 FAM9AQ8IZU1 332 aaPredicted RBP26.7■■□□□ 1.86
SPSB3-205ENST00000564070 FAM69CQ0P6D2 419 aa26.69■■□□□ 1.86
SPSB3-205ENST00000564070 KIAA0556O60303 1618 aa26.68■■□□□ 1.86
SPSB3-205ENST00000564070 PTPRGP23470 1445 aa26.67■■□□□ 1.86
SPSB3-205ENST00000564070 KIF21BO75037 1637 aa26.67■■□□□ 1.86
SPSB3-205ENST00000564070 ABCC10Q5T3U5 1492 aa26.65■■□□□ 1.86
SPSB3-205ENST00000564070 MAPKBP1O60336 1514 aa26.64■■□□□ 1.85
SPSB3-205ENST00000564070 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
SPSB3-205ENST00000564070 DIP2BQ9P265 1576 aa26.58■■□□□ 1.85
SPSB3-205ENST00000564070 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
SPSB3-205ENST00000564070 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
SPSB3-205ENST00000564070 UACAQ9BZF9 1416 aa26.51■■□□□ 1.83
SPSB3-205ENST00000564070 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
SPSB3-205ENST00000564070 SAMD9Q5K651 1589 aa26.48■■□□□ 1.83
SPSB3-205ENST00000564070 TSPOAP1O95153 1857 aa26.44■■□□□ 1.82
SPSB3-205ENST00000564070 ASXL2Q76L83 1435 aa26.4■■□□□ 1.82
SPSB3-205ENST00000564070 ABCA8O94911 1581 aa26.38■■□□□ 1.81
SPSB3-205ENST00000564070 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
SPSB3-205ENST00000564070 KDM5BQ9UGL1 1544 aa26.38■■□□□ 1.81
SPSB3-205ENST00000564070 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
SPSB3-205ENST00000564070 EFCAB5A4FU69 1503 aa26.35■■□□□ 1.81
SPSB3-205ENST00000564070 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
SPSB3-205ENST00000564070 KDM6BO15054 1643 aa26.33■■□□□ 1.81
SPSB3-205ENST00000564070 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
SPSB3-205ENST00000564070 ZCCHC11Q5TAX3 1644 aaKnown RBP26.32■■□□□ 1.8
SPSB3-205ENST00000564070 RANGAP1P46060 587 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-205ENST00000564070 FHOD3Q2V2M9 1422 aa26.27■■□□□ 1.8
SPSB3-205ENST00000564070 PPRC1Q5VV67 1664 aaKnown RBP26.26■■□□□ 1.79
SPSB3-205ENST00000564070 GLI2P10070 1586 aa26.26■■□□□ 1.79
SPSB3-205ENST00000564070 RAPGEF6Q8TEU7 1601 aa26.23■■□□□ 1.79
SPSB3-205ENST00000564070 EPRSP07814 1512 aaKnown RBP26.23■■□□□ 1.79
SPSB3-205ENST00000564070 KDM4FA0A1W2PPD8 638 aa26.18■■□□□ 1.78
SPSB3-205ENST00000564070 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
SPSB3-205ENST00000564070 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
SPSB3-205ENST00000564070 COL17A1Q9UMD9 1497 aaPredicted RBP26.15■■□□□ 1.78
SPSB3-205ENST00000564070 ATP10BO94823 1461 aa26.14■■□□□ 1.78
SPSB3-205ENST00000564070 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.77
SPSB3-205ENST00000564070 NUP153P49790 1475 aaKnown RBP26.12■■□□□ 1.77
SPSB3-205ENST00000564070 FMN1Q68DA7 1419 aa26.1■■□□□ 1.77
SPSB3-205ENST00000564070 KCNH8Q96L42 1107 aa26.09■■□□□ 1.77
SPSB3-205ENST00000564070 ARID3CA6NKF2 412 aa26.08■■□□□ 1.77
SPSB3-205ENST00000564070 TEX14Q8IWB6 1497 aa26.01■■□□□ 1.75
SPSB3-205ENST00000564070 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
SPSB3-205ENST00000564070 CLIP1P30622 1438 aa25.98■■□□□ 1.75
SPSB3-205ENST00000564070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
SPSB3-205ENST00000564070 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
SPSB3-205ENST00000564070 CFAP43Q8NDM7 1665 aa25.98■■□□□ 1.75
SPSB3-205ENST00000564070 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
SPSB3-205ENST00000564070 CDK13Q14004 1512 aaKnown RBP25.92■■□□□ 1.74
SPSB3-205ENST00000564070 MAGI3Q5TCQ9 1506 aa25.91■■□□□ 1.74
SPSB3-205ENST00000564070 ADGRL1O94910 1474 aa25.91■■□□□ 1.74
SPSB3-205ENST00000564070 ABCA9Q8IUA7 1624 aa25.9■■□□□ 1.74
SPSB3-205ENST00000564070 PLEKHD1A6NEE1 506 aa25.89■■□□□ 1.74
SPSB3-205ENST00000564070 PCF11O94913 1555 aaKnown RBP25.87■■□□□ 1.73
SPSB3-205ENST00000564070 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
SPSB3-205ENST00000564070 CASKIN1Q8WXD9 1431 aa25.87■■□□□ 1.73
SPSB3-205ENST00000564070 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
SPSB3-205ENST00000564070 FYCO1Q9BQS8 1478 aa25.83■■□□□ 1.73
SPSB3-205ENST00000564070 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
SPSB3-205ENST00000564070 CCDC18Q5T9S5 1454 aa25.8■■□□□ 1.72
SPSB3-205ENST00000564070 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
SPSB3-205ENST00000564070 CDK11AQ9UQ88 783 aaPredicted RBP25.79■■□□□ 1.72
SPSB3-205ENST00000564070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.76■■□□□ 1.71
SPSB3-205ENST00000564070 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
SPSB3-205ENST00000564070 TROQ12816 1431 aaPredicted RBP25.72■■□□□ 1.71
SPSB3-205ENST00000564070 ARAP3Q8WWN8 1544 aa25.72■■□□□ 1.71
SPSB3-205ENST00000564070 PHLDB1Q86UU1 1377 aa25.7■■□□□ 1.71
SPSB3-205ENST00000564070 NEO1Q92859 1461 aa25.7■■□□□ 1.7
SPSB3-205ENST00000564070 KIF14Q15058 1648 aa25.7■■□□□ 1.7
SPSB3-205ENST00000564070 RAPGEF3O95398 923 aa25.68■■□□□ 1.7
SPSB3-205ENST00000564070 CFAP74Q9C0B2 1584 aa25.65■■□□□ 1.7
SPSB3-205ENST00000564070 FANCAO15360 1455 aa25.61■■□□□ 1.69
SPSB3-205ENST00000564070 PLCH2O75038 1416 aa25.61■■□□□ 1.69
SPSB3-205ENST00000564070 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
SPSB3-205ENST00000564070 AKNAQ7Z591 1439 aa25.56■■□□□ 1.68
SPSB3-205ENST00000564070 VPS8Q8N3P4 1428 aa25.56■■□□□ 1.68
SPSB3-205ENST00000564070 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
SPSB3-205ENST00000564070 HECW2Q9P2P5 1572 aa25.53■■□□□ 1.68
SPSB3-205ENST00000564070 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
SPSB3-205ENST00000564070 MTUS2Q5JR59 1369 aa25.49■■□□□ 1.67
SPSB3-205ENST00000564070 PREX2Q70Z35 1606 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms