RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
PDXDC1-208ENST00000563522 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
PDXDC1-208ENST00000563522 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
PDXDC1-208ENST00000563522 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
PDXDC1-208ENST00000563522 ABCA5Q8WWZ7 1642 aa14.8□□□□□ -0.04
PDXDC1-208ENST00000563522 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
PDXDC1-208ENST00000563522 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
PDXDC1-208ENST00000563522 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
PDXDC1-208ENST00000563522 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
PDXDC1-208ENST00000563522 NUP160Q12769 1436 aa14.72□□□□□ -0.05
PDXDC1-208ENST00000563522 ADAMTS12P58397 1594 aa14.69□□□□□ -0.06
PDXDC1-208ENST00000563522 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
PDXDC1-208ENST00000563522 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
PDXDC1-208ENST00000563522 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
PDXDC1-208ENST00000563522 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
PDXDC1-208ENST00000563522 CEP170Q5SW79 1584 aa14.66□□□□□ -0.06
PDXDC1-208ENST00000563522 ERCC6L2Q5T890 1561 aa14.64□□□□□ -0.07
PDXDC1-208ENST00000563522 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
PDXDC1-208ENST00000563522 PRG4Q92954 1404 aaPredicted RBP14.57□□□□□ -0.08
PDXDC1-208ENST00000563522 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
PDXDC1-208ENST00000563522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.081e-7■■□□□ 12.6
PDXDC1-208ENST00000563522 RUSC2Q8N2Y8 1516 aa14.48□□□□□ -0.09
PDXDC1-208ENST00000563522 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
PDXDC1-208ENST00000563522 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDXDC1-208ENST00000563522 KIAA0586Q9BVV6 1533 aa14.45□□□□□ -0.1
PDXDC1-208ENST00000563522 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
PDXDC1-208ENST00000563522 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
PDXDC1-208ENST00000563522 IGF1RP08069 1367 aa14.44□□□□□ -0.1
PDXDC1-208ENST00000563522 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
PDXDC1-208ENST00000563522 CACNB1Q02641 598 aaPredicted RBP14.42□□□□□ -0.1
PDXDC1-208ENST00000563522 KIF13AQ9H1H9 1805 aa14.42□□□□□ -0.1
PDXDC1-208ENST00000563522 FAM69CQ0P6D2 419 aa14.41□□□□□ -0.1
PDXDC1-208ENST00000563522 CUL7Q14999 1698 aa14.39□□□□□ -0.11
PDXDC1-208ENST00000563522 ADCY10Q96PN6 1610 aa14.38□□□□□ -0.11
PDXDC1-208ENST00000563522 DIP2BQ9P265 1576 aa14.36□□□□□ -0.11
PDXDC1-208ENST00000563522 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
PDXDC1-208ENST00000563522 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
PDXDC1-208ENST00000563522 PTPRGP23470 1445 aa14.33□□□□□ -0.11
PDXDC1-208ENST00000563522 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
PDXDC1-208ENST00000563522 TNIKQ9UKE5 1360 aa14.31□□□□□ -0.12
PDXDC1-208ENST00000563522 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
PDXDC1-208ENST00000563522 ABCC2Q92887 1545 aa14.27□□□□□ -0.12
PDXDC1-208ENST00000563522 KDM6BO15054 1643 aa14.26□□□□□ -0.13
PDXDC1-208ENST00000563522 IQGAP2Q13576 1575 aa14.26□□□□□ -0.13
PDXDC1-208ENST00000563522 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
PDXDC1-208ENST00000563522 PLB1Q6P1J6 1458 aa14.25□□□□□ -0.13
PDXDC1-208ENST00000563522 ASXL2Q76L83 1435 aa14.23□□□□□ -0.13
PDXDC1-208ENST00000563522 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
PDXDC1-208ENST00000563522 GLI2P10070 1586 aa14.22□□□□□ -0.13
PDXDC1-208ENST00000563522 KDM4FA0A1W2PPD8 638 aa14.2□□□□□ -0.14
PDXDC1-208ENST00000563522 DISP1Q96F81 1524 aa14.2□□□□□ -0.14
PDXDC1-208ENST00000563522 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
PDXDC1-208ENST00000563522 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
PDXDC1-208ENST00000563522 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
PDXDC1-208ENST00000563522 UGGT2Q9NYU1 1516 aa14.18□□□□□ -0.14
PDXDC1-208ENST00000563522 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
PDXDC1-208ENST00000563522 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
PDXDC1-208ENST00000563522 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
PDXDC1-208ENST00000563522 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
PDXDC1-208ENST00000563522 PPRC1Q5VV67 1664 aaKnown RBP14.12□□□□□ -0.15
PDXDC1-208ENST00000563522 TEX14Q8IWB6 1497 aa14.12□□□□□ -0.15
PDXDC1-208ENST00000563522 KIAA0556O60303 1618 aa14.12□□□□□ -0.15
PDXDC1-208ENST00000563522 MAP3K4Q9Y6R4 1608 aa14.09□□□□□ -0.15
PDXDC1-208ENST00000563522 GOLGA3Q08378 1498 aa14.08□□□□□ -0.16
PDXDC1-208ENST00000563522 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.16
PDXDC1-208ENST00000563522 COL17A1Q9UMD9 1497 aaPredicted RBP14.07□□□□□ -0.16
PDXDC1-208ENST00000563522 WDR7Q9Y4E6 1490 aa14.07□□□□□ -0.16
PDXDC1-208ENST00000563522 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
PDXDC1-208ENST00000563522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
PDXDC1-208ENST00000563522 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
PDXDC1-208ENST00000563522 ABCA8O94911 1581 aa14.01□□□□□ -0.17
PDXDC1-208ENST00000563522 MAGI3Q5TCQ9 1506 aa14.01□□□□□ -0.17
PDXDC1-208ENST00000563522 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
PDXDC1-208ENST00000563522 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
PDXDC1-208ENST00000563522 CD109Q6YHK3 1445 aa14□□□□□ -0.17
PDXDC1-208ENST00000563522 APLP2Q06481 763 aa13.99□□□□□ -0.17
PDXDC1-208ENST00000563522 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
PDXDC1-208ENST00000563522 CFAP43Q8NDM7 1665 aa13.96□□□□□ -0.17
PDXDC1-208ENST00000563522 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
PDXDC1-208ENST00000563522 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
PDXDC1-208ENST00000563522 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
PDXDC1-208ENST00000563522 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
PDXDC1-208ENST00000563522 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
PDXDC1-208ENST00000563522 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
PDXDC1-208ENST00000563522 CAPN15O75808 1086 aa13.91□□□□□ -0.18
PDXDC1-208ENST00000563522 ATP10BO94823 1461 aa13.89□□□□□ -0.19
PDXDC1-208ENST00000563522 ILDR1Q86SU0 546 aaPredicted RBP13.89□□□□□ -0.19
PDXDC1-208ENST00000563522 HECW2Q9P2P5 1572 aa13.88□□□□□ -0.19
PDXDC1-208ENST00000563522 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
PDXDC1-208ENST00000563522 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
PDXDC1-208ENST00000563522 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-208ENST00000563522 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
PDXDC1-208ENST00000563522 SAMD9Q5K651 1589 aa13.84□□□□□ -0.19
PDXDC1-208ENST00000563522 NEO1Q92859 1461 aa13.84□□□□□ -0.19
PDXDC1-208ENST00000563522 EEA1Q15075 1411 aa13.82□□□□□ -0.2
PDXDC1-208ENST00000563522 ARID3CA6NKF2 412 aa13.82□□□□□ -0.2
PDXDC1-208ENST00000563522 RAPGEF6Q8TEU7 1601 aa13.81□□□□□ -0.2
PDXDC1-208ENST00000563522 KIF21BO75037 1637 aa13.8□□□□□ -0.2
PDXDC1-208ENST00000563522 NUP153P49790 1475 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-208ENST00000563522 RAPGEF3O95398 923 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms