RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 KIF13AQ9H1H9 1805 aa16.86■□□□□ 0.29
AC055876.4-201ENST00000562515 CUL7Q14999 1698 aa16.83■□□□□ 0.28
AC055876.4-201ENST00000562515 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
AC055876.4-201ENST00000562515 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
AC055876.4-201ENST00000562515 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
AC055876.4-201ENST00000562515 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
AC055876.4-201ENST00000562515 MAPKBP1O60336 1514 aa16.71■□□□□ 0.27
AC055876.4-201ENST00000562515 DIP2BQ9P265 1576 aa16.71■□□□□ 0.27
AC055876.4-201ENST00000562515 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
AC055876.4-201ENST00000562515 TSPOAP1O95153 1857 aa16.69■□□□□ 0.26
AC055876.4-201ENST00000562515 ABCC10Q5T3U5 1492 aa16.67■□□□□ 0.26
AC055876.4-201ENST00000562515 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
AC055876.4-201ENST00000562515 IGF1RP08069 1367 aa16.64■□□□□ 0.26
AC055876.4-201ENST00000562515 KDM6BO15054 1643 aa16.64■□□□□ 0.25
AC055876.4-201ENST00000562515 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
AC055876.4-201ENST00000562515 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
AC055876.4-201ENST00000562515 CARMIL2Q6F5E8 1435 aa16.61■□□□□ 0.25
AC055876.4-201ENST00000562515 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
AC055876.4-201ENST00000562515 PTPRGP23470 1445 aa16.57■□□□□ 0.24
AC055876.4-201ENST00000562515 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
AC055876.4-201ENST00000562515 ABCC2Q92887 1545 aa16.53■□□□□ 0.24
AC055876.4-201ENST00000562515 CTTNBP2Q8WZ74 1663 aa16.51■□□□□ 0.23
AC055876.4-201ENST00000562515 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
AC055876.4-201ENST00000562515 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
AC055876.4-201ENST00000562515 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
AC055876.4-201ENST00000562515 ASXL2Q76L83 1435 aa16.47■□□□□ 0.23
AC055876.4-201ENST00000562515 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
AC055876.4-201ENST00000562515 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
AC055876.4-201ENST00000562515 UACAQ9BZF9 1416 aa16.45■□□□□ 0.22
AC055876.4-201ENST00000562515 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
AC055876.4-201ENST00000562515 UHRF1BP1LA0JNW5 1464 aa16.45■□□□□ 0.22
AC055876.4-201ENST00000562515 GLI2P10070 1586 aa16.45■□□□□ 0.22
AC055876.4-201ENST00000562515 UGGT2Q9NYU1 1516 aa16.44■□□□□ 0.22
AC055876.4-201ENST00000562515 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
AC055876.4-201ENST00000562515 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
AC055876.4-201ENST00000562515 TEX14Q8IWB6 1497 aa16.37■□□□□ 0.21
AC055876.4-201ENST00000562515 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
AC055876.4-201ENST00000562515 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
AC055876.4-201ENST00000562515 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
AC055876.4-201ENST00000562515 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
AC055876.4-201ENST00000562515 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
AC055876.4-201ENST00000562515 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
AC055876.4-201ENST00000562515 ABCA8O94911 1581 aa16.27■□□□□ 0.2
AC055876.4-201ENST00000562515 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
AC055876.4-201ENST00000562515 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
AC055876.4-201ENST00000562515 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
AC055876.4-201ENST00000562515 COL17A1Q9UMD9 1497 aaPredicted RBP16.22■□□□□ 0.19
AC055876.4-201ENST00000562515 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
AC055876.4-201ENST00000562515 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
AC055876.4-201ENST00000562515 MAGI3Q5TCQ9 1506 aa16.19■□□□□ 0.18
AC055876.4-201ENST00000562515 KIF21BO75037 1637 aa16.17■□□□□ 0.18
AC055876.4-201ENST00000562515 RAPGEF6Q8TEU7 1601 aa16.16■□□□□ 0.18
AC055876.4-201ENST00000562515 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
AC055876.4-201ENST00000562515 SAMD9Q5K651 1589 aa16.15■□□□□ 0.18
AC055876.4-201ENST00000562515 HECW2Q9P2P5 1572 aa16.14■□□□□ 0.17
AC055876.4-201ENST00000562515 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
AC055876.4-201ENST00000562515 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
AC055876.4-201ENST00000562515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
AC055876.4-201ENST00000562515 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
AC055876.4-201ENST00000562515 ATP10BO94823 1461 aa16.08■□□□□ 0.16
AC055876.4-201ENST00000562515 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
AC055876.4-201ENST00000562515 ARAP3Q8WWN8 1544 aa16.05■□□□□ 0.16
AC055876.4-201ENST00000562515 EEA1Q15075 1411 aa16.05■□□□□ 0.16
AC055876.4-201ENST00000562515 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
AC055876.4-201ENST00000562515 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
AC055876.4-201ENST00000562515 FHOD3Q2V2M9 1422 aa16.02■□□□□ 0.15
AC055876.4-201ENST00000562515 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
AC055876.4-201ENST00000562515 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
AC055876.4-201ENST00000562515 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
AC055876.4-201ENST00000562515 NEO1Q92859 1461 aa16■□□□□ 0.15
AC055876.4-201ENST00000562515 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
AC055876.4-201ENST00000562515 FRMPD1Q5SYB0 1578 aa15.97■□□□□ 0.15
AC055876.4-201ENST00000562515 ILDR1Q86SU0 546 aaPredicted RBP15.97■□□□□ 0.15
AC055876.4-201ENST00000562515 BCORL1Q5H9F3 1711 aa15.96■□□□□ 0.15
AC055876.4-201ENST00000562515 ADAMTSL3P82987 1691 aa15.95■□□□□ 0.14
AC055876.4-201ENST00000562515 ARHGEF40Q8TER5 1519 aa15.95■□□□□ 0.14
AC055876.4-201ENST00000562515 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
AC055876.4-201ENST00000562515 RICTORQ6R327 1708 aa15.94■□□□□ 0.14
AC055876.4-201ENST00000562515 ARID4BQ4LE39 1312 aaPredicted RBP15.94■□□□□ 0.14
AC055876.4-201ENST00000562515 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
AC055876.4-201ENST00000562515 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
AC055876.4-201ENST00000562515 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
AC055876.4-201ENST00000562515 PTPRMP28827 1452 aa15.91■□□□□ 0.14
AC055876.4-201ENST00000562515 PLEKHD1A6NEE1 506 aa15.91■□□□□ 0.14
AC055876.4-201ENST00000562515 FANCAO15360 1455 aa15.91■□□□□ 0.14
AC055876.4-201ENST00000562515 DENND4BO75064 1496 aaPredicted RBP15.91■□□□□ 0.14
AC055876.4-201ENST00000562515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.9■□□□□ 0.14
AC055876.4-201ENST00000562515 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
AC055876.4-201ENST00000562515 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
AC055876.4-201ENST00000562515 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
AC055876.4-201ENST00000562515 AKNAQ7Z591 1439 aa15.87■□□□□ 0.13
AC055876.4-201ENST00000562515 ZFYVE16Q7Z3T8 1539 aa15.86■□□□□ 0.13
AC055876.4-201ENST00000562515 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
AC055876.4-201ENST00000562515 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
AC055876.4-201ENST00000562515 PCF11O94913 1555 aaKnown RBP15.84■□□□□ 0.13
AC055876.4-201ENST00000562515 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
AC055876.4-201ENST00000562515 FER1L4A9Z1Z3 1794 aa15.84■□□□□ 0.13
AC055876.4-201ENST00000562515 POGZQ7Z3K3 1410 aa15.83■□□□□ 0.12
AC055876.4-201ENST00000562515 KIF14Q15058 1648 aa15.83■□□□□ 0.12
AC055876.4-201ENST00000562515 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms