RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 PRG4Q92954 1404 aaPredicted RBP23.4■■□□□ 1.34
USB1-205ENST00000561743 JPH4Q96JJ6 628 aa23.37■■□□□ 1.33
USB1-205ENST00000561743 KIAA0586Q9BVV6 1533 aa23.34■■□□□ 1.33
USB1-205ENST00000561743 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
USB1-205ENST00000561743 IQGAP2Q13576 1575 aa23.19■■□□□ 1.3
USB1-205ENST00000561743 ADCY10Q96PN6 1610 aa23.18■■□□□ 1.3
USB1-205ENST00000561743 KIF13AQ9H1H9 1805 aa23.17■■□□□ 1.3
USB1-205ENST00000561743 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
USB1-205ENST00000561743 CTTNBP2Q8WZ74 1663 aa23.08■■□□□ 1.29
USB1-205ENST00000561743 MAPKBP1O60336 1514 aa23.08■■□□□ 1.28
USB1-205ENST00000561743 CARMIL2Q6F5E8 1435 aa23.07■■□□□ 1.28
USB1-205ENST00000561743 DISP1Q96F81 1524 aa23.05■■□□□ 1.28
USB1-205ENST00000561743 UGGT2Q9NYU1 1516 aa23.04■■□□□ 1.28
USB1-205ENST00000561743 PTPRGP23470 1445 aa23.04■■□□□ 1.28
USB1-205ENST00000561743 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
USB1-205ENST00000561743 NPM1P06748 294 aaKnown RBP eCLIP23.01■■□□□ 1.27
USB1-205ENST00000561743 DIP2BQ9P265 1576 aa23■■□□□ 1.27
USB1-205ENST00000561743 ABCC10Q5T3U5 1492 aa22.99■■□□□ 1.27
USB1-205ENST00000561743 PRXQ9BXM0 1461 aa22.99■■□□□ 1.27
USB1-205ENST00000561743 KIAA0556O60303 1618 aa22.99■■□□□ 1.27
USB1-205ENST00000561743 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
USB1-205ENST00000561743 ABCC2Q92887 1545 aa22.93■■□□□ 1.26
USB1-205ENST00000561743 UHRF1BP1LA0JNW5 1464 aa22.92■■□□□ 1.26
USB1-205ENST00000561743 FAM69CQ0P6D2 419 aa22.9■■□□□ 1.26
USB1-205ENST00000561743 UACAQ9BZF9 1416 aa22.9■■□□□ 1.26
USB1-205ENST00000561743 TSPOAP1O95153 1857 aa22.85■■□□□ 1.25
USB1-205ENST00000561743 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
USB1-205ENST00000561743 KDM5BQ9UGL1 1544 aa22.83■■□□□ 1.25
USB1-205ENST00000561743 ZCCHC11Q5TAX3 1644 aaKnown RBP22.83■■□□□ 1.25
USB1-205ENST00000561743 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
USB1-205ENST00000561743 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
USB1-205ENST00000561743 EEA1Q15075 1411 aa22.8■■□□□ 1.24
USB1-205ENST00000561743 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
USB1-205ENST00000561743 GLI2P10070 1586 aa22.77■■□□□ 1.24
USB1-205ENST00000561743 ABCA8O94911 1581 aa22.76■■□□□ 1.23
USB1-205ENST00000561743 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
USB1-205ENST00000561743 KDM6BO15054 1643 aa22.73■■□□□ 1.23
USB1-205ENST00000561743 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
USB1-205ENST00000561743 EPRSP07814 1512 aaKnown RBP22.7■■□□□ 1.22
USB1-205ENST00000561743 MAP3K4Q9Y6R4 1608 aa22.7■■□□□ 1.22
USB1-205ENST00000561743 KIF21BO75037 1637 aa22.68■■□□□ 1.22
USB1-205ENST00000561743 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
USB1-205ENST00000561743 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
USB1-205ENST00000561743 P3H3Q8IVL6 736 aa22.61■■□□□ 1.21
USB1-205ENST00000561743 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
USB1-205ENST00000561743 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
USB1-205ENST00000561743 CFAP43Q8NDM7 1665 aa22.56■■□□□ 1.2
USB1-205ENST00000561743 TEX14Q8IWB6 1497 aa22.54■■□□□ 1.2
USB1-205ENST00000561743 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
USB1-205ENST00000561743 ATP10BO94823 1461 aa22.53■■□□□ 1.2
USB1-205ENST00000561743 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
USB1-205ENST00000561743 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
USB1-205ENST00000561743 COL17A1Q9UMD9 1497 aaPredicted RBP22.49■■□□□ 1.19
USB1-205ENST00000561743 RANGAP1P46060 587 aaPredicted RBP22.49■■□□□ 1.19
USB1-205ENST00000561743 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
USB1-205ENST00000561743 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
USB1-205ENST00000561743 NUP153P49790 1475 aaKnown RBP22.46■■□□□ 1.19
USB1-205ENST00000561743 MAGI3Q5TCQ9 1506 aa22.46■■□□□ 1.19
USB1-205ENST00000561743 CD109Q6YHK3 1445 aa22.45■■□□□ 1.18
USB1-205ENST00000561743 ABCA9Q8IUA7 1624 aa22.42■■□□□ 1.18
USB1-205ENST00000561743 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
USB1-205ENST00000561743 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
USB1-205ENST00000561743 KDM4FA0A1W2PPD8 638 aa22.32■■□□□ 1.16
USB1-205ENST00000561743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
USB1-205ENST00000561743 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
USB1-205ENST00000561743 ARHGAP35Q9NRY4 1499 aa22.32■■□□□ 1.16
USB1-205ENST00000561743 ARAP3Q8WWN8 1544 aa22.29■■□□□ 1.16
USB1-205ENST00000561743 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
USB1-205ENST00000561743 HECW1Q76N89 1606 aa22.26■■□□□ 1.15
USB1-205ENST00000561743 FMN1Q68DA7 1419 aa22.25■■□□□ 1.15
USB1-205ENST00000561743 ADGRL1O94910 1474 aa22.25■■□□□ 1.15
USB1-205ENST00000561743 NEO1Q92859 1461 aa22.22■■□□□ 1.15
USB1-205ENST00000561743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.15
USB1-205ENST00000561743 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
USB1-205ENST00000561743 PLEKHD1A6NEE1 506 aa22.22■■□□□ 1.15
USB1-205ENST00000561743 LRRIQ1Q96JM4 1722 aa22.22■■□□□ 1.15
USB1-205ENST00000561743 PHLDB1Q86UU1 1377 aa22.21■■□□□ 1.15
USB1-205ENST00000561743 FRMPD1Q5SYB0 1578 aa22.17■■□□□ 1.14
USB1-205ENST00000561743 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
USB1-205ENST00000561743 RICTORQ6R327 1708 aa22.12■■□□□ 1.13
USB1-205ENST00000561743 FANCAO15360 1455 aa22.12■■□□□ 1.13
USB1-205ENST00000561743 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
USB1-205ENST00000561743 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
USB1-205ENST00000561743 KIF14Q15058 1648 aa22.1■■□□□ 1.13
USB1-205ENST00000561743 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
USB1-205ENST00000561743 MYO5CQ9NQX4 1742 aa22.1■■□□□ 1.13
USB1-205ENST00000561743 AKNAQ7Z591 1439 aa22.08■■□□□ 1.13
USB1-205ENST00000561743 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
USB1-205ENST00000561743 CASKIN1Q8WXD9 1431 aa22.05■■□□□ 1.12
USB1-205ENST00000561743 PLCH2O75038 1416 aa22.04■■□□□ 1.12
USB1-205ENST00000561743 TROQ12816 1431 aaPredicted RBP22.04■■□□□ 1.12
USB1-205ENST00000561743 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
USB1-205ENST00000561743 CDK11AQ9UQ88 783 aaPredicted RBP22.03■■□□□ 1.12
USB1-205ENST00000561743 CLIP1P30622 1438 aa22.02■■□□□ 1.12
USB1-205ENST00000561743 CCDC18Q5T9S5 1454 aa22.02■■□□□ 1.12
USB1-205ENST00000561743 ZMYM4Q5VZL5 1548 aa22.01■■□□□ 1.11
USB1-205ENST00000561743 FYCO1Q9BQS8 1478 aa22■■□□□ 1.11
USB1-205ENST00000561743 ADAMTSL3P82987 1691 aa21.98■■□□□ 1.11
USB1-205ENST00000561743 BCORL1Q5H9F3 1711 aa21.97■■□□□ 1.11
USB1-205ENST00000561743 CDC42BPBQ9Y5S2 1711 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms