RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FBLN2P98095 1184 aa16.29■□□□□ 0.2
USP3-219ENST00000561326 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
USP3-219ENST00000561326 CHD1O14646 1710 aa16.21■□□□□ 0.19
USP3-219ENST00000561326 IQGAP2Q13576 1575 aa16.21■□□□□ 0.18
USP3-219ENST00000561326 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
USP3-219ENST00000561326 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
USP3-219ENST00000561326 ARHGAP35Q9NRY4 1499 aa16.16■□□□□ 0.18
USP3-219ENST00000561326 NUP160Q12769 1436 aa16.15■□□□□ 0.18
USP3-219ENST00000561326 CEP170Q5SW79 1584 aa16.15■□□□□ 0.18
USP3-219ENST00000561326 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
USP3-219ENST00000561326 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
USP3-219ENST00000561326 APLP2Q06481 763 aa16.12■□□□□ 0.17
USP3-219ENST00000561326 UGGT2Q9NYU1 1516 aa16.11■□□□□ 0.17
USP3-219ENST00000561326 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
USP3-219ENST00000561326 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
USP3-219ENST00000561326 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
USP3-219ENST00000561326 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
USP3-219ENST00000561326 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
USP3-219ENST00000561326 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
USP3-219ENST00000561326 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
USP3-219ENST00000561326 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
USP3-219ENST00000561326 DISP1Q96F81 1524 aa16■□□□□ 0.15
USP3-219ENST00000561326 ATP1B4Q9UN42 357 aaPredicted RBP15.98■□□□□ 0.15
USP3-219ENST00000561326 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
USP3-219ENST00000561326 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
USP3-219ENST00000561326 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
USP3-219ENST00000561326 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
USP3-219ENST00000561326 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
USP3-219ENST00000561326 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
USP3-219ENST00000561326 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
USP3-219ENST00000561326 PCF11O94913 1555 aaKnown RBP15.93■□□□□ 0.14
USP3-219ENST00000561326 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
USP3-219ENST00000561326 TTBK1Q5TCY1 1321 aaPredicted RBP15.91■□□□□ 0.14
USP3-219ENST00000561326 HECW1Q76N89 1606 aa15.89■□□□□ 0.13
USP3-219ENST00000561326 PTPRGP23470 1445 aa15.88■□□□□ 0.13
USP3-219ENST00000561326 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
USP3-219ENST00000561326 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
USP3-219ENST00000561326 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
USP3-219ENST00000561326 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
USP3-219ENST00000561326 LRRIQ1Q96JM4 1722 aa15.83■□□□□ 0.13
USP3-219ENST00000561326 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
USP3-219ENST00000561326 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
USP3-219ENST00000561326 EPRSP07814 1512 aaKnown RBP15.8■□□□□ 0.12
USP3-219ENST00000561326 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
USP3-219ENST00000561326 PCGF6Q9BYE7 350 aa15.8■□□□□ 0.12
USP3-219ENST00000561326 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
USP3-219ENST00000561326 PLB1Q6P1J6 1458 aa15.79■□□□□ 0.12
USP3-219ENST00000561326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
USP3-219ENST00000561326 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
USP3-219ENST00000561326 ABCA8O94911 1581 aa15.79■□□□□ 0.12
USP3-219ENST00000561326 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
USP3-219ENST00000561326 NUP153P49790 1475 aaKnown RBP15.77■□□□□ 0.11
USP3-219ENST00000561326 UACAQ9BZF9 1416 aa15.77■□□□□ 0.11
USP3-219ENST00000561326 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
USP3-219ENST00000561326 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
USP3-219ENST00000561326 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
USP3-219ENST00000561326 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
USP3-219ENST00000561326 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
USP3-219ENST00000561326 ABCC2Q92887 1545 aa15.7■□□□□ 0.1
USP3-219ENST00000561326 UHRF1BP1LA0JNW5 1464 aa15.7■□□□□ 0.1
USP3-219ENST00000561326 ATP10BO94823 1461 aa15.7■□□□□ 0.1
USP3-219ENST00000561326 DNAJC5Q9H3Z4 198 aa15.66■□□□□ 0.1
USP3-219ENST00000561326 MAGI3Q5TCQ9 1506 aa15.64■□□□□ 0.09
USP3-219ENST00000561326 TROQ12816 1431 aaPredicted RBP15.64■□□□□ 0.09
USP3-219ENST00000561326 NCOA2Q15596 1464 aa15.64■□□□□ 0.09
USP3-219ENST00000561326 ARHGEF11O15085 1522 aa15.63■□□□□ 0.09
USP3-219ENST00000561326 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
USP3-219ENST00000561326 RRBP1Q9P2E9 1410 aaKnown RBP15.61■□□□□ 0.09
USP3-219ENST00000561326 KDM5BQ9UGL1 1544 aa15.61■□□□□ 0.09
USP3-219ENST00000561326 ZCCHC11Q5TAX3 1644 aaKnown RBP15.61■□□□□ 0.09
USP3-219ENST00000561326 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
USP3-219ENST00000561326 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
USP3-219ENST00000561326 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
USP3-219ENST00000561326 RIMBP3CA6NJZ7 1639 aa15.6■□□□□ 0.09
USP3-219ENST00000561326 RIMBP3BA6NNM3 1639 aa15.6■□□□□ 0.09
USP3-219ENST00000561326 RIMBP3Q9UFD9 1639 aa15.6■□□□□ 0.09
USP3-219ENST00000561326 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
USP3-219ENST00000561326 KIF14Q15058 1648 aa15.57■□□□□ 0.08
USP3-219ENST00000561326 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
USP3-219ENST00000561326 ITSN2Q9NZM3 1697 aa15.55■□□□□ 0.08
USP3-219ENST00000561326 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
USP3-219ENST00000561326 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.083e-6■□□□□ 10.3
USP3-219ENST00000561326 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
USP3-219ENST00000561326 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
USP3-219ENST00000561326 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
USP3-219ENST00000561326 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
USP3-219ENST00000561326 CFDP1Q9UEE9 299 aaPredicted RBP15.5■□□□□ 0.07
USP3-219ENST00000561326 CDC42BPAQ5VT25 1732 aa15.5■□□□□ 0.07
USP3-219ENST00000561326 ITGAEP38570 1179 aa15.48■□□□□ 0.07
USP3-219ENST00000561326 GPATCH8Q9UKJ3 1502 aaKnown RBP15.48■□□□□ 0.07
USP3-219ENST00000561326 ABCC10Q5T3U5 1492 aa15.47■□□□□ 0.07
USP3-219ENST00000561326 WDR7Q9Y4E6 1490 aa15.47■□□□□ 0.07
USP3-219ENST00000561326 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
USP3-219ENST00000561326 ASXL2Q76L83 1435 aa15.46■□□□□ 0.07
USP3-219ENST00000561326 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.06
USP3-219ENST00000561326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.062e-7■■■□□ 16.1
USP3-219ENST00000561326 CDC42BPBQ9Y5S2 1711 aa15.44■□□□□ 0.06
USP3-219ENST00000561326 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
USP3-219ENST00000561326 PREX2Q70Z35 1606 aa15.43■□□□□ 0.06
USP3-219ENST00000561326 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 1158.7 ms