RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TRHP20396 242 aaPredicted RBP29.64■■■□□ 2.34
CDC42BPB-208ENST00000561271 KIAA0586Q9BVV6 1533 aa29.62■■■□□ 2.33
CDC42BPB-208ENST00000561271 CARMIL1Q5VZK9 1371 aa29.61■■■□□ 2.33
CDC42BPB-208ENST00000561271 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
CDC42BPB-208ENST00000561271 IQGAP2Q13576 1575 aa29.53■■■□□ 2.32
CDC42BPB-208ENST00000561271 KIF13AQ9H1H9 1805 aa29.49■■■□□ 2.31
CDC42BPB-208ENST00000561271 CTTNBP2Q8WZ74 1663 aa29.49■■■□□ 2.31
CDC42BPB-208ENST00000561271 ADCY10Q96PN6 1610 aa29.46■■■□□ 2.31
CDC42BPB-208ENST00000561271 RAPGEF2Q9Y4G8 1499 aa29.44■■■□□ 2.3
CDC42BPB-208ENST00000561271 CARMIL2Q6F5E8 1435 aa29.29■■■□□ 2.28
CDC42BPB-208ENST00000561271 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
CDC42BPB-208ENST00000561271 MAPKBP1O60336 1514 aa29.28■■■□□ 2.28
CDC42BPB-208ENST00000561271 DISP1Q96F81 1524 aa29.28■■■□□ 2.28
CDC42BPB-208ENST00000561271 KIAA0556O60303 1618 aa29.27■■■□□ 2.28
CDC42BPB-208ENST00000561271 PRXQ9BXM0 1461 aa29.23■■■□□ 2.27
CDC42BPB-208ENST00000561271 PTPRGP23470 1445 aa29.23■■■□□ 2.27
CDC42BPB-208ENST00000561271 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
CDC42BPB-208ENST00000561271 TNIKQ9UKE5 1360 aa29.22■■■□□ 2.27
CDC42BPB-208ENST00000561271 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.27
CDC42BPB-208ENST00000561271 TSPOAP1O95153 1857 aa29.16■■■□□ 2.26
CDC42BPB-208ENST00000561271 NPM1P06748 294 aaKnown RBP eCLIP29.14■■■□□ 2.26
CDC42BPB-208ENST00000561271 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
CDC42BPB-208ENST00000561271 ABCC2Q92887 1545 aa29.11■■■□□ 2.25
CDC42BPB-208ENST00000561271 UHRF1BP1LA0JNW5 1464 aa29.08■■■□□ 2.25
CDC42BPB-208ENST00000561271 ZCCHC11Q5TAX3 1644 aaKnown RBP29.07■■■□□ 2.24
CDC42BPB-208ENST00000561271 UACAQ9BZF9 1416 aa29.05■■■□□ 2.24
CDC42BPB-208ENST00000561271 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
CDC42BPB-208ENST00000561271 EEA1Q15075 1411 aa29.02■■■□□ 2.24
CDC42BPB-208ENST00000561271 FAM69CQ0P6D2 419 aa29■■■□□ 2.23
CDC42BPB-208ENST00000561271 CSRNP3Q8WYN3 585 aa28.97■■■□□ 2.23
CDC42BPB-208ENST00000561271 KDM5BQ9UGL1 1544 aa28.97■■■□□ 2.23
CDC42BPB-208ENST00000561271 ASXL2Q76L83 1435 aa28.95■■■□□ 2.23
CDC42BPB-208ENST00000561271 ABCA8O94911 1581 aa28.94■■■□□ 2.22
CDC42BPB-208ENST00000561271 SAMD9Q5K651 1589 aa28.94■■■□□ 2.22
CDC42BPB-208ENST00000561271 PPRC1Q5VV67 1664 aaKnown RBP28.93■■■□□ 2.22
CDC42BPB-208ENST00000561271 PLB1Q6P1J6 1458 aa28.93■■■□□ 2.22
CDC42BPB-208ENST00000561271 KIF21BO75037 1637 aa28.93■■■□□ 2.22
CDC42BPB-208ENST00000561271 GLI2P10070 1586 aa28.89■■■□□ 2.22
CDC42BPB-208ENST00000561271 KDM6BO15054 1643 aa28.87■■■□□ 2.21
CDC42BPB-208ENST00000561271 FAM9AQ8IZU1 332 aaPredicted RBP28.86■■■□□ 2.21
CDC42BPB-208ENST00000561271 MAP3K4Q9Y6R4 1608 aa28.85■■■□□ 2.21
CDC42BPB-208ENST00000561271 EPRSP07814 1512 aaKnown RBP28.8■■■□□ 2.2
CDC42BPB-208ENST00000561271 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
CDC42BPB-208ENST00000561271 WDR7Q9Y4E6 1490 aa28.77■■■□□ 2.2
CDC42BPB-208ENST00000561271 RAPGEF6Q8TEU7 1601 aa28.76■■■□□ 2.19
CDC42BPB-208ENST00000561271 P3H3Q8IVL6 736 aa28.74■■■□□ 2.19
CDC42BPB-208ENST00000561271 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
CDC42BPB-208ENST00000561271 EFCAB5A4FU69 1503 aa28.67■■■□□ 2.18
CDC42BPB-208ENST00000561271 RANGAP1P46060 587 aaPredicted RBP28.65■■■□□ 2.18
CDC42BPB-208ENST00000561271 FHOD3Q2V2M9 1422 aa28.65■■■□□ 2.18
CDC42BPB-208ENST00000561271 ATP10BO94823 1461 aa28.59■■■□□ 2.17
CDC42BPB-208ENST00000561271 TEX14Q8IWB6 1497 aa28.59■■■□□ 2.17
CDC42BPB-208ENST00000561271 ARID3CA6NKF2 412 aa28.59■■■□□ 2.17
CDC42BPB-208ENST00000561271 EHMT2Q96KQ7 1210 aa28.57■■■□□ 2.16
CDC42BPB-208ENST00000561271 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
CDC42BPB-208ENST00000561271 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
CDC42BPB-208ENST00000561271 KCNH8Q96L42 1107 aa28.5■■■□□ 2.15
CDC42BPB-208ENST00000561271 COL17A1Q9UMD9 1497 aaPredicted RBP28.49■■■□□ 2.15
CDC42BPB-208ENST00000561271 MAGI3Q5TCQ9 1506 aa28.48■■■□□ 2.15
CDC42BPB-208ENST00000561271 CD109Q6YHK3 1445 aa28.48■■■□□ 2.15
CDC42BPB-208ENST00000561271 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
CDC42BPB-208ENST00000561271 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
CDC42BPB-208ENST00000561271 ARHGAP35Q9NRY4 1499 aa28.42■■■□□ 2.14
CDC42BPB-208ENST00000561271 LRRIQ1Q96JM4 1722 aa28.39■■■□□ 2.14
CDC42BPB-208ENST00000561271 HECW1Q76N89 1606 aa28.39■■■□□ 2.13
CDC42BPB-208ENST00000561271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
CDC42BPB-208ENST00000561271 HNRNPUL2Q1KMD3 747 aaKnown RBP28.37■■■□□ 2.13
CDC42BPB-208ENST00000561271 CDK13Q14004 1512 aaKnown RBP28.37■■■□□ 2.13
CDC42BPB-208ENST00000561271 TTC37Q6PGP7 1564 aa28.31■■■□□ 2.12
CDC42BPB-208ENST00000561271 FMN1Q68DA7 1419 aa28.3■■■□□ 2.12
CDC42BPB-208ENST00000561271 ARAP3Q8WWN8 1544 aa28.26■■■□□ 2.11
CDC42BPB-208ENST00000561271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.25■■■□□ 2.11
CDC42BPB-208ENST00000561271 PCF11O94913 1555 aaKnown RBP28.24■■■□□ 2.11
CDC42BPB-208ENST00000561271 CFAP74Q9C0B2 1584 aa28.23■■■□□ 2.11
CDC42BPB-208ENST00000561271 ADGRL1O94910 1474 aa28.21■■■□□ 2.11
CDC42BPB-208ENST00000561271 NEO1Q92859 1461 aa28.21■■■□□ 2.11
CDC42BPB-208ENST00000561271 MYO5CQ9NQX4 1742 aa28.21■■■□□ 2.11
CDC42BPB-208ENST00000561271 FRMPD1Q5SYB0 1578 aa28.2■■■□□ 2.11
CDC42BPB-208ENST00000561271 KDM4FA0A1W2PPD8 638 aa28.2■■■□□ 2.1
CDC42BPB-208ENST00000561271 PLEKHD1A6NEE1 506 aa28.19■■■□□ 2.1
CDC42BPB-208ENST00000561271 RICTORQ6R327 1708 aa28.18■■■□□ 2.1
CDC42BPB-208ENST00000561271 KIF14Q15058 1648 aa28.18■■■□□ 2.1
CDC42BPB-208ENST00000561271 ATP1B4Q9UN42 357 aaPredicted RBP28.14■■■□□ 2.1
CDC42BPB-208ENST00000561271 PHLDB1Q86UU1 1377 aa28.11■■■□□ 2.09
CDC42BPB-208ENST00000561271 FANCAO15360 1455 aa28.09■■■□□ 2.09
CDC42BPB-208ENST00000561271 CLIP1P30622 1438 aa28.06■■■□□ 2.08
CDC42BPB-208ENST00000561271 CASKIN1Q8WXD9 1431 aa28.05■■■□□ 2.08
CDC42BPB-208ENST00000561271 CCDC18Q5T9S5 1454 aa28.03■■■□□ 2.08
CDC42BPB-208ENST00000561271 ARHGEF40Q8TER5 1519 aa28.02■■■□□ 2.08
CDC42BPB-208ENST00000561271 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
CDC42BPB-208ENST00000561271 TROQ12816 1431 aaPredicted RBP28.02■■■□□ 2.08
CDC42BPB-208ENST00000561271 AKNAQ7Z591 1439 aa28.02■■■□□ 2.08
CDC42BPB-208ENST00000561271 RAPGEF3O95398 923 aa28.02■■■□□ 2.08
CDC42BPB-208ENST00000561271 CDC42BPBQ9Y5S2 1711 aa28.01■■■□□ 2.07
CDC42BPB-208ENST00000561271 DENND4BO75064 1496 aaPredicted RBP27.99■■■□□ 2.07
CDC42BPB-208ENST00000561271 ZMYM4Q5VZL5 1548 aa27.97■■■□□ 2.07
CDC42BPB-208ENST00000561271 CDC42BPAQ5VT25 1732 aa27.97■■■□□ 2.07
CDC42BPB-208ENST00000561271 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
CDC42BPB-208ENST00000561271 PLCH2O75038 1416 aa27.96■■■□□ 2.07
CDC42BPB-208ENST00000561271 CDK11AQ9UQ88 783 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms